BLASTX nr result

ID: Scutellaria22_contig00016047 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00016047
         (234 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002512441.1| arginine/serine-rich splicing factor, putati...    77   1e-12
ref|XP_002318990.1| predicted protein [Populus trichocarpa] gi|2...    76   3e-12
ref|XP_001774172.1| predicted protein [Physcomitrella patens sub...    76   3e-12
dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sat...    73   3e-11
gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japo...    73   3e-11

>ref|XP_002512441.1| arginine/serine-rich splicing factor, putative [Ricinus communis]
           gi|223548402|gb|EEF49893.1| arginine/serine-rich
           splicing factor, putative [Ricinus communis]
          Length = 300

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 44/78 (56%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   FEDTRDAEDAIRGRDGYNFDGCRLRVELA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 179
           FED RDAEDAIRGRDGYNFDGCRLRVELA                               
Sbjct: 89  FEDARDAEDAIRGRDGYNFDGCRLRVELAHGGRRHSSPGDRYSSYSGRSGSRGPSRRSDY 148

Query: 180 XXLVTGLPSSASWQDLKD 233
             LVTGLPSSASWQDLKD
Sbjct: 149 RVLVTGLPSSASWQDLKD 166


>ref|XP_002318990.1| predicted protein [Populus trichocarpa] gi|222857366|gb|EEE94913.1|
           predicted protein [Populus trichocarpa]
          Length = 224

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 43/78 (55%), Positives = 44/78 (56%), Gaps = 1/78 (1%)
 Frame = +3

Query: 3   FEDTRDAEDAIRGRDGYNFDGCRLRVELA-XXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 179
           FE+ RDAEDAIRGRDGYNFDGCRLRVELA                               
Sbjct: 51  FEEARDAEDAIRGRDGYNFDGCRLRVELAHGGRRHSSPVDHYSSYSGSSGSRGPSKRSDY 110

Query: 180 XXLVTGLPSSASWQDLKD 233
             LVTGLPSSASWQDLKD
Sbjct: 111 RVLVTGLPSSASWQDLKD 128


>ref|XP_001774172.1| predicted protein [Physcomitrella patens subsp. patens]
           gi|162674440|gb|EDQ60948.1| predicted protein
           [Physcomitrella patens subsp. patens]
          Length = 240

 Score = 75.9 bits (185), Expect = 3e-12
 Identities = 41/77 (53%), Positives = 43/77 (55%)
 Frame = +3

Query: 3   FEDTRDAEDAIRGRDGYNFDGCRLRVELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           FED RDAEDAIRGRDGYNFDG RLRVE+A                               
Sbjct: 52  FEDARDAEDAIRGRDGYNFDGNRLRVEIAHGGRGPPPAVDRSAAESGGRAGGVSRRSEYR 111

Query: 183 XLVTGLPSSASWQDLKD 233
            +VTGLPSSASWQDLKD
Sbjct: 112 VMVTGLPSSASWQDLKD 128


>dbj|BAC79849.1| putative pre-mRNA splicing factor SF2 [Oryza sativa Japonica Group]
          Length = 362

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/77 (55%), Positives = 43/77 (55%)
 Frame = +3

Query: 3   FEDTRDAEDAIRGRDGYNFDGCRLRVELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           FED RDAEDAIRGRDGYNFDG RLRVELA                               
Sbjct: 118 FEDPRDAEDAIRGRDGYNFDGNRLRVELA--HGGRGNSSSFNNSGGGGRRGGVSRHTEYR 175

Query: 183 XLVTGLPSSASWQDLKD 233
            LVTGLPSSASWQDLKD
Sbjct: 176 VLVTGLPSSASWQDLKD 192


>gb|EEE67802.1| hypothetical protein OsJ_25544 [Oryza sativa Japonica Group]
          Length = 338

 Score = 72.8 bits (177), Expect = 3e-11
 Identities = 43/77 (55%), Positives = 43/77 (55%)
 Frame = +3

Query: 3   FEDTRDAEDAIRGRDGYNFDGCRLRVELAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 182
           FED RDAEDAIRGRDGYNFDG RLRVELA                               
Sbjct: 118 FEDPRDAEDAIRGRDGYNFDGNRLRVELA--HGGRGNSSSFNNSGGGGRRGGVSRHTEYR 175

Query: 183 XLVTGLPSSASWQDLKD 233
            LVTGLPSSASWQDLKD
Sbjct: 176 VLVTGLPSSASWQDLKD 192


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