BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00015423
         (1001 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|2...   356   6e-96
ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [...   353   4e-95
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor...   353   5e-95
ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chlor...   337   3e-90
ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chlor...   336   5e-90

>ref|XP_002301949.1| predicted protein [Populus trichocarpa] gi|222843675|gb|EEE81222.1|
           predicted protein [Populus trichocarpa]
          Length = 444

 Score =  356 bits (913), Expect = 6e-96
 Identities = 196/331 (59%), Positives = 245/331 (74%), Gaps = 4/331 (1%)
 Frame = +1

Query: 16  HVDKKTHSFRFSEKPR*IMLSLQSLSWSSPKTLFINPRNPSLRGLITTISAHSHSIPAAN 195
           H+ K    +  S++    MLS+ S+S  S  + F++ + P+   L+T    HS S    N
Sbjct: 16  HITKSNRKYERSKR----MLSISSVSRCSAPSFFLSQK-PTASRLLTV---HSSSTREPN 67

Query: 196 SDSDDFHDPSSRPYNFSGVKIDEKVELGSGKLRLDSWISSRINGISRARVQSSIRSGLVS 375
           S+ +    P  R  N+SGVK++E V+  SGK RLDSWISSRI+GISRARVQSSI+SGLVS
Sbjct: 68  SNQN----PGQR-INYSGVKLEESVDSKSGKSRLDSWISSRISGISRARVQSSIKSGLVS 122

Query: 376 VNGRIINKASHLVRYGDMVSCMIAEMQPLRAEPEDMPLDIVYEDEHLIVVNKPAHMVVHP 555
           VNG++I+K SH V+ GD V+C+I+E+QPLRAEPE++PLDIVYEDE+++VVNKPAHMVVHP
Sbjct: 123 VNGKVIDKVSHNVKAGDKVNCVISELQPLRAEPENIPLDIVYEDENVLVVNKPAHMVVHP 182

Query: 556 APGNATGTLVNGILHHCRLSTVCFNSEALSDVDDDSGDELRAFSNQAQNGGIGFGLSEAS 735
           APGNATGTLVNGILHHC L TV  + E LS  +D S D+         + G+      AS
Sbjct: 183 APGNATGTLVNGILHHCSLPTVS-SQEVLSGAEDVSDDD---------DEGLCSSSYAAS 232

Query: 736 VRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQFKKHSIKRVYMSLTCGVPAPVSGRVDVP 915
           VRPGIVHRLDKGTSGLLVVAKDEHSH+HL+EQFK H+IKRVY+SLTCGVPAP++GR+DVP
Sbjct: 233 VRPGIVHRLDKGTSGLLVVAKDEHSHAHLSEQFKLHTIKRVYVSLTCGVPAPMAGRIDVP 292

Query: 916 IGRDVNNRIRMIA----SPGSASHRNARHAV 996
           IGRDV+NRIRM A    + G A H  +R+ V
Sbjct: 293 IGRDVSNRIRMAAIVEPNRGQARHAASRYKV 323


>ref|XP_002519370.1| ribosomal pseudouridine synthase, putative [Ricinus communis]
           gi|223541437|gb|EEF42987.1| ribosomal pseudouridine
           synthase, putative [Ricinus communis]
          Length = 399

 Score =  353 bits (906), Expect = 4e-95
 Identities = 188/313 (60%), Positives = 232/313 (74%), Gaps = 4/313 (1%)
 Frame = +1

Query: 73  LSLQSLSWSSPKTLFINPRNPSLRGLITTISAHSHSIPAANSDSDDFHDPSSRPYNFSGV 252
           LSL   S ++P+ LF  P N SL  + T  S  +H+                   N+ G+
Sbjct: 19  LSLPFFS-TNPRRLF--PCNISLSRIFTIRSCQNHT-------------------NYGGI 56

Query: 253 KIDEKVEL---GSGKLRLDSWISSRINGISRARVQSSIRSGLVSVNGRIINKASHLVRYG 423
           +++E V++    S KLRLDSWISSRI+GISRARVQSSI+SGLVSVNGR+++K SH V++G
Sbjct: 57  RLEETVQVVHAKSVKLRLDSWISSRISGISRARVQSSIKSGLVSVNGRVVDKVSHNVKFG 116

Query: 424 DMVSCMIAEMQPLRAEPEDMPLDIVYEDEHLIVVNKPAHMVVHPAPGNATGTLVNGILHH 603
           D V+C I+E+QPLRAEPEDMPLDIVYEDEHL+VVNKP HMVVHPAPGN TGTLVNGILHH
Sbjct: 117 DKVTCTISELQPLRAEPEDMPLDIVYEDEHLLVVNKPPHMVVHPAPGNPTGTLVNGILHH 176

Query: 604 CRLSTVCFNS-EALSDVDDDSGDELRAFSNQAQNGGIGFGLSEASVRPGIVHRLDKGTSG 780
           C L TV  +S E LSD +D S D+ R++S+            E+S+RPGIVHRLDKGTSG
Sbjct: 177 CNLPTVAISSQEVLSDAEDRSDDDERSYSSSC----------ESSIRPGIVHRLDKGTSG 226

Query: 781 LLVVAKDEHSHSHLAEQFKKHSIKRVYMSLTCGVPAPVSGRVDVPIGRDVNNRIRMIASP 960
           LLVVAKDEH+H+HL+EQFK+H+I+RVY+SLT GVP+ ++GR+D+PIGRDVNNRIRM A P
Sbjct: 227 LLVVAKDEHAHAHLSEQFKQHTIQRVYISLTSGVPSALTGRIDIPIGRDVNNRIRMTAIP 286

Query: 961 GSASHRNARHAVS 999
           G      ARHA S
Sbjct: 287 GPIKQGRARHAAS 299


>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
           vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
           product [Vitis vinifera]
          Length = 433

 Score =  353 bits (905), Expect = 5e-95
 Identities = 190/311 (61%), Positives = 226/311 (72%), Gaps = 3/311 (0%)
 Frame = +1

Query: 76  SLQSLSWSSPKTLFINPRNPSLRGLITTISAHSHSIPAANSDSDDFHDPSSRPYNFSGVK 255
           S  S+S +S   L   PRNP     +  I         +NS  +     S R  N++GV+
Sbjct: 9   SFFSISHTSQSALLF-PRNPKSCSRVFRILR-----ACSNSTDEPLVSVSGRRTNYAGVR 62

Query: 256 IDEKV---ELGSGKLRLDSWISSRINGISRARVQSSIRSGLVSVNGRIINKASHLVRYGD 426
           ++E V      SGKLRLDSWISSRI GISRARVQSSIRSGLVSVN RI++K SH++R GD
Sbjct: 63  LEETVVDVNSDSGKLRLDSWISSRIIGISRARVQSSIRSGLVSVNDRIVDKVSHVIRAGD 122

Query: 427 MVSCMIAEMQPLRAEPEDMPLDIVYEDEHLIVVNKPAHMVVHPAPGNATGTLVNGILHHC 606
            V+C I+E+QPLRAEPED+PLDIVYEDEH++VVNKPAHMVVHPAPGNA+GTLVNGILHHC
Sbjct: 123 KVNCTISELQPLRAEPEDIPLDIVYEDEHVLVVNKPAHMVVHPAPGNASGTLVNGILHHC 182

Query: 607 RLSTVCFNSEALSDVDDDSGDELRAFSNQAQNGGIGFGLSEASVRPGIVHRLDKGTSGLL 786
            L TV   +   S+ DD S DE  +F+      G   G  E ++RPGIVHRLDKGTSGLL
Sbjct: 183 SLPTVALPNRD-SEEDDISDDEFNSFA-----AGQNCGTCETNIRPGIVHRLDKGTSGLL 236

Query: 787 VVAKDEHSHSHLAEQFKKHSIKRVYMSLTCGVPAPVSGRVDVPIGRDVNNRIRMIASPGS 966
           VVAKDEHSH+HL+EQFK HSI RVY+SLT GVP P+SGRV++P+GRD NNRIRM A PG 
Sbjct: 237 VVAKDEHSHAHLSEQFKLHSIHRVYISLTSGVPTPLSGRVEIPVGRDPNNRIRMTAVPGP 296

Query: 967 ASHRNARHAVS 999
           ++   ARHA S
Sbjct: 297 SNSGQARHAAS 307


>ref|XP_003523282.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Glycine
           max]
          Length = 450

 Score =  337 bits (863), Expect = 3e-90
 Identities = 179/296 (60%), Positives = 223/296 (75%), Gaps = 6/296 (2%)
 Frame = +1

Query: 130 NPSLRGLITTISAHSHSIPAANSDSDDFHDPSSRPYNFSGVKIDEKVE--LGSGKLRLDS 303
           +PSL    T+    S +  AA+  + D         NFSGV+++E V+  +GSGKLRLD+
Sbjct: 27  SPSLFLSATSYKFRSATASAASGSAGDSDSDGEPKLNFSGVRLEEAVDSRIGSGKLRLDN 86

Query: 304 WISSRINGISRARVQSSIRSGLVSVNGRIINKASHLVRYGDMVSCMIAEMQPLRAEPEDM 483
           WISSRINGISRARVQSSI+SGLV VNGR+++K S  V+ GD + C IAE+Q LRA P+++
Sbjct: 87  WISSRINGISRARVQSSIKSGLVHVNGRVVDKVSFNVKSGDEIKCTIAELQNLRAVPQNI 146

Query: 484 PLDIVYEDEHLIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFN-SEALSDVDDD 660
           PLDIVYEDEH++V+NKPAHMVVHPAPGN +GTLVNGILHHC L  V F+  EALSD  +D
Sbjct: 147 PLDIVYEDEHVLVINKPAHMVVHPAPGNTSGTLVNGILHHCNLPNVEFSKDEALSDT-ED 205

Query: 661 SGDELRAFSNQAQN-GGIGFGLSEA--SVRPGIVHRLDKGTSGLLVVAKDEHSHSHLAEQ 831
           S DE  ++ + A +  G+   LS A  S+RPGIVHRLDKGTSGLLVVAKDEHSH  L+EQ
Sbjct: 206 SDDEFNSYISLASSCEGLNSRLSVASNSIRPGIVHRLDKGTSGLLVVAKDEHSHMKLSEQ 265

Query: 832 FKKHSIKRVYMSLTCGVPAPVSGRVDVPIGRDVNNRIRMIASPGSASHRNARHAVS 999
           FK+ +IKR+Y+SLT GVP PV+GRV+VP+GRD NNRIRM A  G  + + AR+A S
Sbjct: 266 FKQRTIKRLYVSLTAGVPTPVAGRVEVPVGRDTNNRIRMTAVTGPVNSKKARYAAS 321


>ref|XP_004143077.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Cucumis
           sativus]
          Length = 453

 Score =  336 bits (862), Expect = 5e-90
 Identities = 175/304 (57%), Positives = 226/304 (74%), Gaps = 4/304 (1%)
 Frame = +1

Query: 100 SPKTLFINPRNPSLRGLITTISAHSHSIPAANSDSDDFHDPSS-RPYNFSGVKIDEKVEL 276
           SP   F  P    +   +  IS++  +    +SD D++ +  S R  N++G +++E V++
Sbjct: 15  SPIHFFFPPNRRRIGSNVLRISSNFST--RCSSDYDEYSEAQSERIANYAGTRLEETVDV 72

Query: 277 GSGKLRLDSWISSRINGISRARVQSSIRSGLVSVNGRIINKASHLVRYGDMVSCMIAEMQ 456
             GK+RLDSWIS RINGISRARVQSSIR+GLVSVNGR+I+K SH V+ GD+++C I+E+Q
Sbjct: 73  NPGKVRLDSWISCRINGISRARVQSSIRAGLVSVNGRVIDKVSHNVKAGDVINCTISELQ 132

Query: 457 PLRAEPEDMPLDIVYEDEHLIVVNKPAHMVVHPAPGNATGTLVNGILHHCRLSTVCFN-- 630
           PLRAEPED+ LDIVYEDEH++VVNKPAHMVVHPAPGNATGTLVN IL+HC L  V  +  
Sbjct: 133 PLRAEPEDIDLDIVYEDEHVLVVNKPAHMVVHPAPGNATGTLVNAILNHCSLPMVATSTG 192

Query: 631 -SEALSDVDDDSGDELRAFSNQAQNGGIGFGLSEASVRPGIVHRLDKGTSGLLVVAKDEH 807
            +E+ SDV DD    +  FS           +SEA +RPGIVHRLDKGTSGLLVVAKDEH
Sbjct: 193 ENESDSDVSDDEFSSIGVFSR----------VSEAPIRPGIVHRLDKGTSGLLVVAKDEH 242

Query: 808 SHSHLAEQFKKHSIKRVYMSLTCGVPAPVSGRVDVPIGRDVNNRIRMIASPGSASHRNAR 987
           SH+HL+ QFK+HSI+RVY+SLTCGVP   +GR+++PI RD NNRIRM A  G+ ++ +A+
Sbjct: 243 SHAHLSAQFKQHSIERVYISLTCGVPPSTAGRIEMPICRDPNNRIRMTAIDGTKNNPHAK 302

Query: 988 HAVS 999
           +A S
Sbjct: 303 YAAS 306