BLASTX nr result
ID: Scutellaria22_contig00015296
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00015296
(1704 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [V... 656 0.0
ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus comm... 628 e-177
ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana] g... 595 e-167
dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidops... 593 e-167
ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabi... 590 e-166
>ref|XP_002265789.1| PREDICTED: DNA polymerase alpha subunit B [Vitis vinifera]
gi|297738371|emb|CBI27572.3| unnamed protein product
[Vitis vinifera]
Length = 623
Score = 656 bits (1693), Expect = 0.0
Identities = 326/511 (63%), Positives = 401/511 (78%), Gaps = 6/511 (1%)
Frame = +3
Query: 9 HYEETEHTLDSPTGKRTLAHEKSSDSAQKSNGSKFTSEKIIESVTPFGSRKNKFVVQSTL 188
H E E L +P+ + H DSAQ++NG+ + K VTPFG R +KFVVQ T+
Sbjct: 103 HEEIKEDILGTPSDRSGRHHADPFDSAQRTNGNSSSYGKPSNHVTPFGKRTSKFVVQLTV 162
Query: 189 NDPRTQTIKVEENQV-NSEDEIIKRIQPSKKCSLLINGSQPEPGCRFMYDRIEDKFNFLE 365
N+P + EN+ N +D+II+R+QPSK+CSLL++GS+P PGCRFMYDRIED+FN LE
Sbjct: 163 NNPPSAENGKNENKFENVDDDIIRRVQPSKRCSLLVHGSRPGPGCRFMYDRIEDRFNSLE 222
Query: 366 NCIKTHSNAYVSSGRYEEPVDPSVASQKSIFAVGMICCEEEGRLKEKPVLLQSSVEHSGG 545
N IK H+ A V++G Y+EP DP+VASQKS+FA GMICC+ EGRL EK +LLQSSV+HSGG
Sbjct: 223 NRIKKHTTALVATGLYKEPTDPTVASQKSVFATGMICCDGEGRLNEKSILLQSSVQHSGG 282
Query: 546 QRVRLDLQKLNQFSIFPGQVVGVEGHNPSGHCLIASNIIDHVPLSVASS-EQHPSKRQAL 722
QRVRLDL KLNQFSIFPGQVVG+EGHNPSGHCLIAS I+D +P+S + + HP+K+QA
Sbjct: 283 QRVRLDLSKLNQFSIFPGQVVGIEGHNPSGHCLIASKILDSIPVSAPTDVDLHPAKKQAR 342
Query: 723 DHNLQLTNPLQDTPEVSLIAAAGPYTTSDNLLFEPLTDLLAYARRKQPQLLVLLGPFIDS 902
D Q + E+SL+ AAGP+TT+DNLLFEPLT+LLAYARRK PQLL+LLGPF+DS
Sbjct: 343 DEEFQSADSSHKLAELSLMVAAGPFTTTDNLLFEPLTELLAYARRKMPQLLILLGPFVDS 402
Query: 903 DHPELRKGTVNQTFEEMFRQEILGKLQDYVEYMGPTVQVVLMPSIRDANHDYVFPQPAFE 1082
+HPE+RKGTV+++F+E+F EIL +LQDYVEYMG +V+L+PSIRDANHD+VFPQPAF
Sbjct: 403 EHPEIRKGTVDRSFDEIFHLEILRRLQDYVEYMGSAARVILVPSIRDANHDFVFPQPAFS 462
Query: 1083 IHTTDFSHQIHSVANPGMFSANQVKVACCTADILKHLSAEEICRNP-QGGSKQRLTNLAK 1259
IH D HQI S+ NPGMF AN+VKV CCT D++K LS E I RNP G S+ R+T +A
Sbjct: 463 IHPPDLKHQITSLTNPGMFDANEVKVGCCTVDVIKQLSGEMISRNPTDGSSRDRMTTIAN 522
Query: 1260 HILNQHSFYPLYPPAEEVPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG---EGD 1430
HIL+Q SFYPLYP AE +PLDFSLA +AL S+IPD+LILPSDLA FVKVLSLG EG
Sbjct: 523 HILSQRSFYPLYPLAEGIPLDFSLAPEALEVSTIPDVLILPSDLASFVKVLSLGGRNEG- 581
Query: 1431 DEEVKCISVNPGRLARGEGGGFFVEINYRGN 1523
+E VKCI VNPGRLA+GEGGG FVE+NY+G+
Sbjct: 582 EELVKCICVNPGRLAKGEGGGHFVELNYQGS 612
>ref|XP_002514998.1| alpha DNA polymerase, putative [Ricinus communis]
gi|223546049|gb|EEF47552.1| alpha DNA polymerase,
putative [Ricinus communis]
Length = 621
Score = 628 bits (1619), Expect = e-177
Identities = 306/506 (60%), Positives = 395/506 (78%), Gaps = 6/506 (1%)
Frame = +3
Query: 24 EHTLDSPTGKRTLAHEKSSDSAQKSNGSKFTSEKIIESVTPFGSRKNKFVVQSTLND-PR 200
E +PT + + + DS KS G+ ++S K + VTPFG R +KFVV+ +N+ P
Sbjct: 107 EEVPGTPTDESQKLNSEPFDSIIKSTGNGYSSGKRSKHVTPFGRRTDKFVVKFNINNLPD 166
Query: 201 TQTIKVEENQVNSEDEIIKRIQPSKKCSLLINGSQPEPGCRFMYDRIEDKFNFLENCIKT 380
T+ E + N ED+IIKR+QP KKCS +++GS PEPGCRFMYDRIED+FN L+N I+
Sbjct: 167 TENGDNEHVRENMEDDIIKRVQPRKKCSFVVHGSGPEPGCRFMYDRIEDRFNALDNRIRK 226
Query: 381 HSNAYVSSGRYEEPVDPSVASQKSIFAVGMICCEEEGRLKEKPVLLQSSVEHSGGQRVRL 560
H+ A V+SG YEEP DP+VASQ+++FAVGMICC+ EGRL EK VLLQSS+EHSGGQRV L
Sbjct: 227 HAAALVASGLYEEPTDPTVASQRNVFAVGMICCDGEGRLNEKSVLLQSSIEHSGGQRVHL 286
Query: 561 DLQKLNQFSIFPGQVVGVEGHNPSGHCLIASNIIDHVPLSVA-SSEQHPSKRQALDHNLQ 737
DL L+QFSIFPGQ+V +EGHNPSGHCL+AS ++D +PLS A P+K+QALD ++
Sbjct: 287 DLHNLSQFSIFPGQIVAIEGHNPSGHCLVASKLVDSIPLSAAPDGNLPPAKKQALDQEIE 346
Query: 738 LTNPLQDTPEVSLIAAAGPYTTSDNLLFEPLTDLLAYARRKQPQLLVLLGPFIDSDHPEL 917
T E+S++ A+GP+TT DNL+FEPLT+LLAYA RK PQLL+LLGPF+DS+HPE+
Sbjct: 347 SIGS-SCTQEISVLIASGPFTTLDNLMFEPLTELLAYASRKLPQLLILLGPFVDSEHPEI 405
Query: 918 RKGTVNQTFEEMFRQEILGKLQDYVEYMGPTVQVVLMPSIRDANHDYVFPQPAFEIHTTD 1097
+KGTV+ +F+E+FRQEIL +LQDYVEYMG QV+++PS RDANHD+VFPQPAF+IH ++
Sbjct: 406 KKGTVDGSFDEIFRQEILRRLQDYVEYMGSDAQVLIVPSTRDANHDFVFPQPAFDIHRSN 465
Query: 1098 FSHQIHSVANPGMFSANQVKVACCTADILKHLSAEEICRNPQGGS-KQRLTNLAKHILNQ 1274
HQI S+ NPG+F ANQV+V CCT DI+K L +EE+ RNP G+ R++ LA HIL+Q
Sbjct: 466 LQHQIRSLTNPGIFEANQVRVGCCTVDIIKQLGSEEMSRNPTDGTPSNRMSRLANHILSQ 525
Query: 1275 HSFYPLYPPAEEVPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLG---EGDDEEVK 1445
SFYPLYPPAE+VPLDFSLA +ALH S+P ILI+PSD+ +F+KVLSLG EG +E+ K
Sbjct: 526 RSFYPLYPPAEDVPLDFSLAPEALHIPSVPHILIVPSDMKYFIKVLSLGGRIEG-EEQTK 584
Query: 1446 CISVNPGRLARGEGGGFFVEINYRGN 1523
C+ +NPGRLA+GEGGG FVE+NYRG+
Sbjct: 585 CVCINPGRLAKGEGGGTFVELNYRGS 610
>ref|NP_176930.2| DNA polymerase alpha 2 [Arabidopsis thaliana]
gi|332196552|gb|AEE34673.1| DNA polymerase alpha 2
[Arabidopsis thaliana]
Length = 620
Score = 595 bits (1533), Expect = e-167
Identities = 296/511 (57%), Positives = 381/511 (74%), Gaps = 5/511 (0%)
Frame = +3
Query: 3 NGHYEETEHTLDSPTGKRTLAHEKSSDSAQKSNGSKFTSEKIIESVTPFGSRKNKFVVQS 182
+G E+TE + +PT K H DS +S +++ K + VTPFGSR KFVV+
Sbjct: 101 DGVQEDTEEIVTTPTNKSQRLHPDPFDSISRSRDYGYSTGKSVGHVTPFGSRIEKFVVKF 160
Query: 183 TLNDPRTQTIKVEENQV-NSEDEIIKRIQPSKKCSLLINGSQPEPGCRFMYDRIEDKFNF 359
+ + N V NSED+IIKR+Q S++CSL +NGS PEPGCRFMYDR ED+F+
Sbjct: 161 NVGNVAAHAENGNNNDVENSEDDIIKRVQTSQRCSLKVNGSGPEPGCRFMYDRTEDRFSA 220
Query: 360 LENCIKTHSNAYVSSGRYEEPVDPSVASQKSIFAVGMICCEEEGRLKEKPVLLQSSVEHS 539
LE I H++A+ +SG YEE VDP+VASQ+SIFAVGMICC+ EG L +K +LLQSS E +
Sbjct: 221 LEYRIVRHADAFAASGLYEEQVDPAVASQRSIFAVGMICCDGEGHLNDKSILLQSSAERT 280
Query: 540 GGQRVRLDLQKLNQFSIFPGQVVGVEGHNPSGHCLIASNIIDHVPLSVASS-EQHPSKRQ 716
GQRV +DL++L+QFSIFPGQVVG+EG NPSGH L AS ++D VPL++ + P+KRQ
Sbjct: 281 SGQRVPVDLKRLDQFSIFPGQVVGIEGQNPSGHYLTASKLLDSVPLTLTVDVDLPPAKRQ 340
Query: 717 ALDHNLQLTNPLQDT---PEVSLIAAAGPYTTSDNLLFEPLTDLLAYARRKQPQLLVLLG 887
LD + + P +++ EVS I A+GP+TTSDNLLFEPL +LLAYA+RK PQLLVLLG
Sbjct: 341 ILDQEVLV--PAEESCQKSEVSFIIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLVLLG 398
Query: 888 PFIDSDHPELRKGTVNQTFEEMFRQEILGKLQDYVEYMGPTVQVVLMPSIRDANHDYVFP 1067
PF+DS+HPE++KG V+ TF E+F+ E+L KLQDYVE+MG V+VVL+PSIRDANHD++FP
Sbjct: 399 PFVDSEHPEIKKGAVDATFNEIFQVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDFIFP 458
Query: 1068 QPAFEIHTTDFSHQIHSVANPGMFSANQVKVACCTADILKHLSAEEICRNPQGGSKQRLT 1247
QP F+IH D HQ+ S++NPG F ANQVKV+CCT D+LK LS EE+ +NP G R++
Sbjct: 459 QPPFDIHIPDLEHQMTSLSNPGTFEANQVKVSCCTVDVLKQLSGEEMSKNPSGVPTDRMS 518
Query: 1248 NLAKHILNQHSFYPLYPPAEEVPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLGEG 1427
LA H+L Q SFYPLYPP E +P D SLA KAL SSIPDIL+LPSD+ +FVK+LSLGE
Sbjct: 519 RLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQISSIPDILLLPSDMRYFVKILSLGE- 577
Query: 1428 DDEEVKCISVNPGRLARGEGGGFFVEINYRG 1520
+++ KC+ VNPGRLA+GEG G FVE+ Y+G
Sbjct: 578 EEDAAKCVCVNPGRLAKGEGAGTFVELTYKG 608
>dbj|BAC43176.1| putative DNA polymerase alpha subunit [Arabidopsis thaliana]
gi|29028994|gb|AAO64876.1| At1g67630 [Arabidopsis
thaliana]
Length = 620
Score = 593 bits (1530), Expect = e-167
Identities = 295/511 (57%), Positives = 381/511 (74%), Gaps = 5/511 (0%)
Frame = +3
Query: 3 NGHYEETEHTLDSPTGKRTLAHEKSSDSAQKSNGSKFTSEKIIESVTPFGSRKNKFVVQS 182
+G E+TE + +PT K H DS +S +++ K + VTPFGSR KFVV+
Sbjct: 101 DGVQEDTEEIVTTPTNKSQRLHPDPFDSISRSRDYGYSTGKSVGHVTPFGSRIEKFVVKF 160
Query: 183 TLNDPRTQTIKVEENQV-NSEDEIIKRIQPSKKCSLLINGSQPEPGCRFMYDRIEDKFNF 359
+ + N V NSED+IIKR+Q S++CSL +NGS PEPGCRFMYDR ED+F+
Sbjct: 161 NVGNVAAHAENGNNNDVENSEDDIIKRVQTSQRCSLKVNGSGPEPGCRFMYDRTEDRFSA 220
Query: 360 LENCIKTHSNAYVSSGRYEEPVDPSVASQKSIFAVGMICCEEEGRLKEKPVLLQSSVEHS 539
LE I H++A+ +SG YEE VDP+VASQ+SIFAVGMICC+ EG L +K +LLQSS E +
Sbjct: 221 LEYRIVRHADAFAASGLYEEQVDPAVASQRSIFAVGMICCDGEGHLNDKSILLQSSAERT 280
Query: 540 GGQRVRLDLQKLNQFSIFPGQVVGVEGHNPSGHCLIASNIIDHVPLSVASS-EQHPSKRQ 716
GQRV +DL++L+QFSIFPGQVVG+EG NPSGH L AS ++D VPL++ + P+KRQ
Sbjct: 281 SGQRVPVDLKRLDQFSIFPGQVVGIEGQNPSGHYLTASKLLDSVPLTLTVDVDLPPAKRQ 340
Query: 717 ALDHNLQLTNPLQDT---PEVSLIAAAGPYTTSDNLLFEPLTDLLAYARRKQPQLLVLLG 887
LD + + P +++ EVS I A+GP+TTSDNLLFEPL +LLAYA+RK PQLLVLLG
Sbjct: 341 ILDQEVLV--PAEESCQKSEVSFIIASGPFTTSDNLLFEPLNELLAYAKRKPPQLLVLLG 398
Query: 888 PFIDSDHPELRKGTVNQTFEEMFRQEILGKLQDYVEYMGPTVQVVLMPSIRDANHDYVFP 1067
PF+DS+HPE++KG V+ TF E+F+ E+L KLQDYVE+MG V+VVL+PSIRDANHD++FP
Sbjct: 399 PFVDSEHPEIKKGAVDATFNEIFQVEVLRKLQDYVEFMGSEVRVVLVPSIRDANHDFIFP 458
Query: 1068 QPAFEIHTTDFSHQIHSVANPGMFSANQVKVACCTADILKHLSAEEICRNPQGGSKQRLT 1247
QP F+IH D HQ+ S++NPG F ANQVKV+CCT D+LK LS EE+ +NP G R++
Sbjct: 459 QPPFDIHIPDLEHQMTSLSNPGTFEANQVKVSCCTVDVLKQLSGEEMSKNPSGVPTDRMS 518
Query: 1248 NLAKHILNQHSFYPLYPPAEEVPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLGEG 1427
LA H+L Q SFYPLYPP E +P D SLA KAL SSIPDIL+LPSD+ +FVK+LSLGE
Sbjct: 519 RLASHLLRQRSFYPLYPPPESLPYDSSLAPKALQISSIPDILLLPSDMRYFVKILSLGE- 577
Query: 1428 DDEEVKCISVNPGRLARGEGGGFFVEINYRG 1520
+++ KC+ VNPGRLA+GEG G +VE+ Y+G
Sbjct: 578 EEDAAKCVCVNPGRLAKGEGAGTYVELTYKG 608
>ref|XP_002888612.1| DNA polymerase alpha subunit B family [Arabidopsis lyrata subsp.
lyrata] gi|297334453|gb|EFH64871.1| DNA polymerase alpha
subunit B family [Arabidopsis lyrata subsp. lyrata]
Length = 619
Score = 590 bits (1520), Expect = e-166
Identities = 294/508 (57%), Positives = 373/508 (73%), Gaps = 2/508 (0%)
Frame = +3
Query: 3 NGHYEETEHTLDSPTGKRTLAHEKSSDSAQKSNGSKFTSEKIIESVTPFGSRKNKFVVQS 182
+G E+TE + +PT + H DS +S +++ K + VTPFGSR KFVV+
Sbjct: 101 DGVQEDTEEIVTTPTNESQRLHPDPFDSISRSRDYGYSTGKSVGHVTPFGSRIEKFVVKF 160
Query: 183 TLNDPRTQTIKVEENQVNSEDEIIKRIQPSKKCSLLINGSQPEPGCRFMYDRIEDKFNFL 362
+ + NSED+IIKR+Q S++CSL +NGS PEPGCRFMYDR ED+FN L
Sbjct: 161 NVGNVAPAENGNSNEIENSEDDIIKRVQTSQRCSLEVNGSGPEPGCRFMYDRTEDRFNVL 220
Query: 363 ENCIKTHSNAYVSSGRYEEPVDPSVASQKSIFAVGMICCEEEGRLKEKPVLLQSSVEHSG 542
EN I H++A+ +SG YEE VDP+VASQ+SIFAVGMICC+ EG L +K VLLQSS E +
Sbjct: 221 ENRIVRHADAFAASGLYEEQVDPAVASQRSIFAVGMICCDGEGHLNDKSVLLQSSAERTS 280
Query: 543 GQRVRLDLQKLNQFSIFPGQVVGVEGHNPSGHCLIASNIIDHVPLSVASS-EQHPSKRQA 719
GQRV LDL +L+QFSIFPGQ+VG+EG NPSGH L AS ++D VPL A + P+KRQ
Sbjct: 281 GQRVPLDLNRLDQFSIFPGQIVGIEGQNPSGHYLTASKLLDSVPLIRAVDVDLPPAKRQN 340
Query: 720 LDHNLQL-TNPLQDTPEVSLIAAAGPYTTSDNLLFEPLTDLLAYARRKQPQLLVLLGPFI 896
LD + + T + EVS I A+GP+TTSDNLLFEPL +LL+YA+RK PQLLVLLGPF+
Sbjct: 341 LDQEVLVPTEESCERSEVSFIIASGPFTTSDNLLFEPLNELLSYAKRKPPQLLVLLGPFV 400
Query: 897 DSDHPELRKGTVNQTFEEMFRQEILGKLQDYVEYMGPTVQVVLMPSIRDANHDYVFPQPA 1076
DS+HPE++KG V+ TF E+F+ E+L KL+DYVE+MG V+VVL+PSIRDANHD++FPQP
Sbjct: 401 DSEHPEIKKGAVDATFSEIFQVEVLRKLRDYVEFMGSEVRVVLVPSIRDANHDFIFPQPP 460
Query: 1077 FEIHTTDFSHQIHSVANPGMFSANQVKVACCTADILKHLSAEEICRNPQGGSKQRLTNLA 1256
F+IH D HQ+ S++NPG F ANQVKV CCT D+LK LS EE+ +NP G R++ LA
Sbjct: 461 FDIHIPDLEHQMTSLSNPGTFEANQVKVGCCTVDVLKQLSGEEMSKNPSGVPTDRMSRLA 520
Query: 1257 KHILNQHSFYPLYPPAEEVPLDFSLANKALHFSSIPDILILPSDLAHFVKVLSLGEGDDE 1436
H+L Q SFYPLYPP E +P D SLA KAL SIPDIL+LPSD+ +FVK+LSLGE ++
Sbjct: 521 SHLLRQRSFYPLYPPPESLPYDSSLAPKALQILSIPDILLLPSDMRYFVKILSLGE-EEN 579
Query: 1437 EVKCISVNPGRLARGEGGGFFVEINYRG 1520
KC+ VNPGRLA+GEG G FVE+ Y+G
Sbjct: 580 AAKCVCVNPGRLAKGEGAGTFVELTYKG 607