BLASTX nr result

ID: Scutellaria22_contig00015265 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00015265
         (256 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatul...   128   6e-28
ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis v...   122   4e-26
emb|CBI26376.3| unnamed protein product [Vitis vinifera]              122   4e-26
dbj|BAF03494.1| XRCC4 homolog [Populus nigra]                         119   2e-25
ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|2...   119   3e-25

>ref|XP_003590794.1| DNA repair protein XRCC4 [Medicago truncatula]
           gi|355479842|gb|AES61045.1| DNA repair protein XRCC4
           [Medicago truncatula]
          Length = 256

 Score =  128 bits (321), Expect = 6e-28
 Identities = 64/84 (76%), Positives = 75/84 (89%)
 Frame = -1

Query: 253 NCKKTTAEVLDFLMDANIRLSEEVVWKTQAFDKLKLEAEKCLAQSERLNGEKSEFESEIY 74
           +CKKTTAE+LDFLMDANIRLSEEVV KT+ F+K K+EAEKCLAQSER+  E+ EFES+IY
Sbjct: 116 DCKKTTAEILDFLMDANIRLSEEVVIKTELFEKTKVEAEKCLAQSERIANERVEFESQIY 175

Query: 73  GKFVKVLNSKKAKLRELRDRLSNK 2
            KF+ VLNSKKAKLRELRD+LS +
Sbjct: 176 TKFLGVLNSKKAKLRELRDQLSKQ 199


>ref|XP_002284388.2| PREDICTED: DNA repair protein XRCC4 [Vitis vinifera]
          Length = 259

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/82 (74%), Positives = 73/82 (89%)
 Frame = -1

Query: 247 KKTTAEVLDFLMDANIRLSEEVVWKTQAFDKLKLEAEKCLAQSERLNGEKSEFESEIYGK 68
           + TTA VLDFLM+ANIRLSEEVV KTQ+F++LK+EAEKCLAQSE+ N EK+EFES IY K
Sbjct: 119 RSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAK 178

Query: 67  FVKVLNSKKAKLRELRDRLSNK 2
           F+ VLNSKKAKLRELRD++S +
Sbjct: 179 FLGVLNSKKAKLRELRDQISKE 200


>emb|CBI26376.3| unnamed protein product [Vitis vinifera]
          Length = 258

 Score =  122 bits (305), Expect = 4e-26
 Identities = 61/82 (74%), Positives = 73/82 (89%)
 Frame = -1

Query: 247 KKTTAEVLDFLMDANIRLSEEVVWKTQAFDKLKLEAEKCLAQSERLNGEKSEFESEIYGK 68
           + TTA VLDFLM+ANIRLSEEVV KTQ+F++LK+EAEKCLAQSE+ N EK+EFES IY K
Sbjct: 119 RSTTAGVLDFLMNANIRLSEEVVIKTQSFERLKVEAEKCLAQSEKFNNEKAEFESAIYAK 178

Query: 67  FVKVLNSKKAKLRELRDRLSNK 2
           F+ VLNSKKAKLRELRD++S +
Sbjct: 179 FLGVLNSKKAKLRELRDQISKE 200


>dbj|BAF03494.1| XRCC4 homolog [Populus nigra]
          Length = 255

 Score =  119 bits (299), Expect = 2e-25
 Identities = 60/82 (73%), Positives = 70/82 (85%)
 Frame = -1

Query: 247 KKTTAEVLDFLMDANIRLSEEVVWKTQAFDKLKLEAEKCLAQSERLNGEKSEFESEIYGK 68
           KKTT  +LDFLMDANIRLSEEVV KTQ+F++LK EAEKCLAQSE+ N +K EFE+ +Y K
Sbjct: 117 KKTTTLILDFLMDANIRLSEEVVRKTQSFERLKGEAEKCLAQSEKFNSQKMEFEAAVYAK 176

Query: 67  FVKVLNSKKAKLRELRDRLSNK 2
           F+ VLNSKK KLRELRD+LS K
Sbjct: 177 FLGVLNSKKRKLRELRDQLSKK 198


>ref|XP_002315726.1| predicted protein [Populus trichocarpa] gi|222864766|gb|EEF01897.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/82 (73%), Positives = 70/82 (85%)
 Frame = -1

Query: 247 KKTTAEVLDFLMDANIRLSEEVVWKTQAFDKLKLEAEKCLAQSERLNGEKSEFESEIYGK 68
           KKTT  +LDFLMDANIRLSEEVV KTQ+F++LK EAEKCLAQSE+ N +K EFE+ +Y K
Sbjct: 117 KKTTTLILDFLMDANIRLSEEVVRKTQSFEQLKGEAEKCLAQSEKFNSQKMEFEAAVYAK 176

Query: 67  FVKVLNSKKAKLRELRDRLSNK 2
           F+ VLNSKK KLRELRD+LS K
Sbjct: 177 FLGVLNSKKRKLRELRDQLSKK 198


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