BLASTX nr result

ID: Scutellaria22_contig00015068 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00015068
         (672 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|2...   134   2e-29
ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3...   127   2e-27
ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putati...   124   2e-26
emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]   124   2e-26

>ref|XP_002306035.1| predicted protein [Populus trichocarpa] gi|222848999|gb|EEE86546.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  134 bits (337), Expect = 2e-29
 Identities = 64/92 (69%), Positives = 81/92 (88%), Gaps = 1/92 (1%)
 Frame = -1

Query: 672 KKRVKPRLWKLKSLNMEIDST-AKGIDEKINSEYEEFLRDLEENPDLRFNLSLCRDKEYQ 496
           +KR KPR WKLKSLNME+D T A+G  EK+NSEYE+FLRDLEENP+LRFN+SL R+KEYQ
Sbjct: 413 RKRGKPRSWKLKSLNMEVDDTRARGDQEKMNSEYEQFLRDLEENPELRFNVSLYRNKEYQ 472

Query: 495 ASEIASTTDGEDLPSIPLDELLGELDVSDDDE 400
            SE+AS TDGED+PSIPL+ELL +L+++D ++
Sbjct: 473 PSEMASMTDGEDIPSIPLEELLADLEINDAED 504


>ref|XP_002305882.1| predicted protein [Populus trichocarpa] gi|222848846|gb|EEE86393.1|
           predicted protein [Populus trichocarpa]
          Length = 511

 Score =  134 bits (336), Expect = 2e-29
 Identities = 64/92 (69%), Positives = 80/92 (86%), Gaps = 1/92 (1%)
 Frame = -1

Query: 672 KKRVKPRLWKLKSLNMEIDST-AKGIDEKINSEYEEFLRDLEENPDLRFNLSLCRDKEYQ 496
           +KR KPR WKLKSLNME+D T A+G  EK+NSEYE+FLRDLEENP+LRFN+SL R+KEYQ
Sbjct: 413 RKRGKPRSWKLKSLNMEVDDTRARGDQEKMNSEYEQFLRDLEENPELRFNVSLYRNKEYQ 472

Query: 495 ASEIASTTDGEDLPSIPLDELLGELDVSDDDE 400
            SE+AS TDGED+PSIPL+ELL +L++ D ++
Sbjct: 473 PSEMASMTDGEDIPSIPLEELLADLEIDDAED 504


>ref|XP_002265288.1| PREDICTED: 60S ribosomal export protein NMD3-like [Vitis vinifera]
          Length = 510

 Score =  127 bits (320), Expect = 2e-27
 Identities = 61/92 (66%), Positives = 79/92 (85%), Gaps = 1/92 (1%)
 Frame = -1

Query: 672 KKRVKPRLWKLKSLNMEID-STAKGIDEKINSEYEEFLRDLEENPDLRFNLSLCRDKEYQ 496
           +KR KPR WKLKSLNME+D S  +   EK+N+EYE FLRDLEE+P+LRFN+SL R+KEYQ
Sbjct: 412 RKRGKPRSWKLKSLNMEVDDSKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQ 471

Query: 495 ASEIASTTDGEDLPSIPLDELLGELDVSDDDE 400
            SE+AS TDGEDLPS+PL+ELL +LD+S++++
Sbjct: 472 PSEMASMTDGEDLPSVPLEELLADLDLSEEED 503


>ref|XP_002533531.1| nonsense-mediated mRNA decay protein, putative [Ricinus communis]
           gi|223526598|gb|EEF28848.1| nonsense-mediated mRNA decay
           protein, putative [Ricinus communis]
          Length = 511

 Score =  124 bits (310), Expect = 2e-26
 Identities = 60/93 (64%), Positives = 78/93 (83%), Gaps = 1/93 (1%)
 Frame = -1

Query: 672 KKRVKPRLWKLKSLNMEID-STAKGIDEKINSEYEEFLRDLEENPDLRFNLSLCRDKEYQ 496
           +KR KPR WKLKSL ME+D S  +   EK+++EYE+FLRDLEEN +LRFN+SL R+KEYQ
Sbjct: 413 RKRGKPRAWKLKSLEMEVDDSRGRNDQEKMDTEYEQFLRDLEENAELRFNVSLYRNKEYQ 472

Query: 495 ASEIASTTDGEDLPSIPLDELLGELDVSDDDEA 397
            SE+AS TDGED+PSIPL+ELL +LD+S+ ++A
Sbjct: 473 PSEMASVTDGEDVPSIPLEELLADLDISEMEDA 505


>emb|CAN60703.1| hypothetical protein VITISV_003522 [Vitis vinifera]
          Length = 594

 Score =  124 bits (310), Expect = 2e-26
 Identities = 60/91 (65%), Positives = 76/91 (83%), Gaps = 1/91 (1%)
 Frame = -1

Query: 672 KKRVKPRLWKLKSLNMEID-STAKGIDEKINSEYEEFLRDLEENPDLRFNLSLCRDKEYQ 496
           +KR KPR WKLKSLNME+D S  +   EK+N+EYE FLRDLEE+P+LRFN+SL R+KEYQ
Sbjct: 412 RKRGKPRSWKLKSLNMEVDDSKGRADQEKMNTEYEVFLRDLEEDPELRFNISLYRNKEYQ 471

Query: 495 ASEIASTTDGEDLPSIPLDELLGELDVSDDD 403
            SE+AS TDGEDLPS+PL+ELL +LD++  +
Sbjct: 472 PSEMASMTDGEDLPSVPLEELLADLDLTSSN 502


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