BLASTX nr result

ID: Scutellaria22_contig00015062 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00015062
         (205 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522264.1| replication factor C / DNA polymerase III ga...   115   3e-24
ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|2...   107   1e-21
ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medica...   106   2e-21
ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|2...   105   4e-21
ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793...   105   5e-21

>ref|XP_002522264.1| replication factor C / DNA polymerase III gamma-tau subunit,
           putative [Ricinus communis] gi|223538517|gb|EEF40122.1|
           replication factor C / DNA polymerase III gamma-tau
           subunit, putative [Ricinus communis]
          Length = 1105

 Score =  115 bits (289), Expect = 3e-24
 Identities = 54/67 (80%), Positives = 58/67 (86%)
 Frame = -3

Query: 203 LASEGRSHQQHKLQRQHTDRHQNLPQKYMPRTFRDLVGQNLVVQALSNAIIKRKVGLLYV 24
           LASE RS  QHKL+R H  RHQN  QKYMPRTFRDLVGQNLV QALSNA+++RKVGLLYV
Sbjct: 433 LASEARSGGQHKLRRNHNSRHQNFTQKYMPRTFRDLVGQNLVAQALSNAVVRRKVGLLYV 492

Query: 23  FYGPHGT 3
           FYGPHGT
Sbjct: 493 FYGPHGT 499


>ref|XP_002305724.1| predicted protein [Populus trichocarpa] gi|222848688|gb|EEE86235.1|
           predicted protein [Populus trichocarpa]
          Length = 1188

 Score =  107 bits (266), Expect = 1e-21
 Identities = 51/65 (78%), Positives = 55/65 (84%)
 Frame = -3

Query: 197 SEGRSHQQHKLQRQHTDRHQNLPQKYMPRTFRDLVGQNLVVQALSNAIIKRKVGLLYVFY 18
           SE RS +Q KL + H  RHQNL QKYMPRTFRDLVGQNLV QALSNA+ +RKVGLLYVFY
Sbjct: 429 SEARSSEQCKLGQNHNGRHQNLTQKYMPRTFRDLVGQNLVAQALSNAVSRRKVGLLYVFY 488

Query: 17  GPHGT 3
           GPHGT
Sbjct: 489 GPHGT 493


>ref|XP_003593819.1| DNA polymerase III subunit gamma/tau [Medicago truncatula]
           gi|355482867|gb|AES64070.1| DNA polymerase III subunit
           gamma/tau [Medicago truncatula]
          Length = 1177

 Score =  106 bits (265), Expect = 2e-21
 Identities = 52/68 (76%), Positives = 58/68 (85%), Gaps = 1/68 (1%)
 Frame = -3

Query: 203 LASEGRSHQQH-KLQRQHTDRHQNLPQKYMPRTFRDLVGQNLVVQALSNAIIKRKVGLLY 27
           LASE RS  QH KL+R H  RHQ+L QKY+PRTFRD+VGQNLV QALSNA+ +RKVGLLY
Sbjct: 441 LASEARSGSQHNKLRRNHHSRHQSLTQKYIPRTFRDMVGQNLVAQALSNAVSRRKVGLLY 500

Query: 26  VFYGPHGT 3
           VFYGPHGT
Sbjct: 501 VFYGPHGT 508


>ref|XP_002317391.1| predicted protein [Populus trichocarpa] gi|222860456|gb|EEE98003.1|
           predicted protein [Populus trichocarpa]
          Length = 1190

 Score =  105 bits (262), Expect = 4e-21
 Identities = 50/67 (74%), Positives = 54/67 (80%)
 Frame = -3

Query: 203 LASEGRSHQQHKLQRQHTDRHQNLPQKYMPRTFRDLVGQNLVVQALSNAIIKRKVGLLYV 24
           LASE RS +Q KL R    RHQNL Q+YMPRTFRDLVGQNL  QALSNA ++RKVG LYV
Sbjct: 431 LASEARSGEQRKLGRNQNGRHQNLTQRYMPRTFRDLVGQNLAAQALSNAAVRRKVGFLYV 490

Query: 23  FYGPHGT 3
           FYGPHGT
Sbjct: 491 FYGPHGT 497


>ref|XP_003547181.1| PREDICTED: uncharacterized protein LOC100793832 [Glycine max]
          Length = 1191

 Score =  105 bits (261), Expect = 5e-21
 Identities = 50/67 (74%), Positives = 56/67 (83%)
 Frame = -3

Query: 203 LASEGRSHQQHKLQRQHTDRHQNLPQKYMPRTFRDLVGQNLVVQALSNAIIKRKVGLLYV 24
           LASE RS  Q KL+     RHQ+L QKYMPRTFRD+VGQNLV QALSNA++K+KVGLLYV
Sbjct: 435 LASEARSGDQRKLRGNRHSRHQSLTQKYMPRTFRDMVGQNLVAQALSNAVMKKKVGLLYV 494

Query: 23  FYGPHGT 3
           FYGPHGT
Sbjct: 495 FYGPHGT 501


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