BLASTX nr result
ID: Scutellaria22_contig00014940
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00014940
(618 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002530460.1| transcription cofactor, putative [Ricinus co... 103 2e-20
ref|XP_002303194.1| predicted protein [Populus trichocarpa] gi|1... 102 4e-20
ref|XP_002332876.1| predicted protein [Populus trichocarpa] gi|2... 102 7e-20
ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II tra... 100 2e-19
gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata] 100 2e-19
>ref|XP_002530460.1| transcription cofactor, putative [Ricinus communis]
gi|223530005|gb|EEF31930.1| transcription cofactor,
putative [Ricinus communis]
Length = 1382
Score = 103 bits (257), Expect = 2e-20
Identities = 52/73 (71%), Positives = 62/73 (84%)
Frame = +1
Query: 328 DWRIGLQRSSRQRIANKIMEILRRHLPFSGEDGLEEEIKIMAVRFEENVYSAAFNQSDYL 507
DWR LQ SRQRI NKIME L+RHLPFSG++GL EE+K +AVRFEE +Y+AA +QSDYL
Sbjct: 21 DWRATLQPDSRQRIVNKIMETLKRHLPFSGQEGL-EELKKIAVRFEEKIYTAATSQSDYL 79
Query: 508 RKISLKMLTLATK 546
RKISLKMLT+ +K
Sbjct: 80 RKISLKMLTMESK 92
Score = 62.8 bits (151), Expect(2) = 5e-09
Identities = 31/45 (68%), Positives = 37/45 (82%)
Frame = +2
Query: 2 MEIMKRYHPFSRQENLQDLEKTAVAFEENIFTAATSQSHYLRKIS 136
ME +KR+ PFS QE L++L+K AV FEE I+TAATSQS YLRKIS
Sbjct: 39 METLKRHLPFSGQEGLEELKKIAVRFEEKIYTAATSQSDYLRKIS 83
Score = 23.1 bits (48), Expect(2) = 5e-09
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1
Query: 202 LRKISLKMLSLE 237
LRKISLKML++E
Sbjct: 79 LRKISLKMLTME 90
>ref|XP_002303194.1| predicted protein [Populus trichocarpa] gi|118486915|gb|ABK95291.1|
unknown [Populus trichocarpa]
gi|222840626|gb|EEE78173.1| predicted protein [Populus
trichocarpa]
Length = 101
Score = 102 bits (255), Expect = 4e-20
Identities = 51/73 (69%), Positives = 62/73 (84%)
Frame = +1
Query: 328 DWRIGLQRSSRQRIANKIMEILRRHLPFSGEDGLEEEIKIMAVRFEENVYSAAFNQSDYL 507
DWR LQ SRQRI NKIME L+RHLPFSG++GL +E+K +AVRFEE +Y+AA +QSDYL
Sbjct: 5 DWRTQLQPDSRQRIVNKIMETLKRHLPFSGQEGL-QELKKIAVRFEEKIYTAATSQSDYL 63
Query: 508 RKISLKMLTLATK 546
RKISLKMLT+ T+
Sbjct: 64 RKISLKMLTIETR 76
Score = 63.9 bits (154), Expect(2) = 3e-09
Identities = 32/45 (71%), Positives = 37/45 (82%)
Frame = +2
Query: 2 MEIMKRYHPFSRQENLQDLEKTAVAFEENIFTAATSQSHYLRKIS 136
ME +KR+ PFS QE LQ+L+K AV FEE I+TAATSQS YLRKIS
Sbjct: 23 METLKRHLPFSGQEGLQELKKIAVRFEEKIYTAATSQSDYLRKIS 67
Score = 23.1 bits (48), Expect(2) = 3e-09
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1
Query: 202 LRKISLKMLSLE 237
LRKISLKML++E
Sbjct: 63 LRKISLKMLTIE 74
>ref|XP_002332876.1| predicted protein [Populus trichocarpa] gi|222834376|gb|EEE72853.1|
predicted protein [Populus trichocarpa]
Length = 120
Score = 102 bits (253), Expect = 7e-20
Identities = 50/73 (68%), Positives = 63/73 (86%)
Frame = +1
Query: 328 DWRIGLQRSSRQRIANKIMEILRRHLPFSGEDGLEEEIKIMAVRFEENVYSAAFNQSDYL 507
DWRI LQ SR+RI +KI+EIL+RHLPFSG++GL +E+K + VRFEE +Y+AA NQSDYL
Sbjct: 21 DWRIQLQPDSRKRIVDKIIEILKRHLPFSGQEGL-QELKKIVVRFEEKIYTAATNQSDYL 79
Query: 508 RKISLKMLTLATK 546
RKISLKMLT+ T+
Sbjct: 80 RKISLKMLTMETR 92
Score = 61.6 bits (148), Expect(2) = 1e-08
Identities = 30/45 (66%), Positives = 37/45 (82%)
Frame = +2
Query: 2 MEIMKRYHPFSRQENLQDLEKTAVAFEENIFTAATSQSHYLRKIS 136
+EI+KR+ PFS QE LQ+L+K V FEE I+TAAT+QS YLRKIS
Sbjct: 39 IEILKRHLPFSGQEGLQELKKIVVRFEEKIYTAATNQSDYLRKIS 83
Score = 23.1 bits (48), Expect(2) = 1e-08
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1
Query: 202 LRKISLKMLSLE 237
LRKISLKML++E
Sbjct: 79 LRKISLKMLTME 90
>ref|XP_004171466.1| PREDICTED: mediator of RNA polymerase II transcription subunit
15a-like, partial [Cucumis sativus]
Length = 589
Score = 100 bits (250), Expect = 2e-19
Identities = 54/85 (63%), Positives = 62/85 (72%)
Frame = +1
Query: 292 PVPVEAAGTEGSDWRIGLQRSSRQRIANKIMEILRRHLPFSGEDGLEEEIKIMAVRFEEN 471
P G E DWR LQ SRQRI NKIME L+RHLP SG++GL E KI AVRFEE
Sbjct: 8 PTQAVEPGMETVDWRSQLQPDSRQRIVNKIMETLKRHLPVSGQEGLSELRKI-AVRFEEK 66
Query: 472 VYSAAFNQSDYLRKISLKMLTLATK 546
+++AA +QSDYLRKISLKMLT+ TK
Sbjct: 67 IFTAATSQSDYLRKISLKMLTMETK 91
Score = 60.1 bits (144), Expect(2) = 3e-08
Identities = 31/45 (68%), Positives = 34/45 (75%)
Frame = +2
Query: 2 MEIMKRYHPFSRQENLQDLEKTAVAFEENIFTAATSQSHYLRKIS 136
ME +KR+ P S QE L +L K AV FEE IFTAATSQS YLRKIS
Sbjct: 38 METLKRHLPVSGQEGLSELRKIAVRFEEKIFTAATSQSDYLRKIS 82
Score = 23.1 bits (48), Expect(2) = 3e-08
Identities = 10/12 (83%), Positives = 12/12 (100%)
Frame = +1
Query: 202 LRKISLKMLSLE 237
LRKISLKML++E
Sbjct: 78 LRKISLKMLTME 89
>gb|AAN62354.1|AF506028_23 CTV.22 [Citrus trifoliata]
Length = 1405
Score = 100 bits (250), Expect = 2e-19
Identities = 51/83 (61%), Positives = 64/83 (77%)
Frame = +1
Query: 298 PVEAAGTEGSDWRIGLQRSSRQRIANKIMEILRRHLPFSGEDGLEEEIKIMAVRFEENVY 477
PV + + DWR LQ SRQRI NKIM+ L+RHLPFSG+DGL E+K +A RFEE +Y
Sbjct: 26 PVGESNLDTGDWRTQLQPDSRQRIVNKIMDTLKRHLPFSGQDGL-NELKKIAGRFEEKIY 84
Query: 478 SAAFNQSDYLRKISLKMLTLATK 546
+AA +QSDYLRKISLKML++ +K
Sbjct: 85 TAASSQSDYLRKISLKMLSMESK 107
Score = 55.5 bits (132), Expect(2) = 3e-07
Identities = 27/45 (60%), Positives = 35/45 (77%)
Frame = +2
Query: 2 MEIMKRYHPFSRQENLQDLEKTAVAFEENIFTAATSQSHYLRKIS 136
M+ +KR+ PFS Q+ L +L+K A FEE I+TAA+SQS YLRKIS
Sbjct: 54 MDTLKRHLPFSGQDGLNELKKIAGRFEEKIYTAASSQSDYLRKIS 98
Score = 24.3 bits (51), Expect(2) = 3e-07
Identities = 11/12 (91%), Positives = 12/12 (100%)
Frame = +1
Query: 202 LRKISLKMLSLE 237
LRKISLKMLS+E
Sbjct: 94 LRKISLKMLSME 105