BLASTX nr result

ID: Scutellaria22_contig00014668 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00014668
         (724 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II su...   260   2e-67
ref|XP_002307132.1| predicted protein [Populus trichocarpa] gi|2...   260   2e-67
gb|AFK35928.1| unknown [Lotus japonicus]                              257   2e-66
ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycin...   255   6e-66
ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ri...   255   7e-66

>ref|XP_002282413.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB4 [Vitis
           vinifera] gi|147856183|emb|CAN80281.1| hypothetical
           protein VITISV_017448 [Vitis vinifera]
           gi|302143481|emb|CBI22042.3| unnamed protein product
           [Vitis vinifera]
          Length = 138

 Score =  260 bits (665), Expect = 2e-67
 Identities = 131/139 (94%), Positives = 137/139 (98%)
 Frame = +3

Query: 63  MSGQEEEENAAELKIPDEFLKAKCLMNCEVSIILEHKYEQLQQMADDPMNQMSQVFEKSL 242
           MSG EEEENAAELKI DEFLKAKCLMNCEV++ILEHKYEQLQQM+DDP+NQ+SQVFEKSL
Sbjct: 1   MSG-EEEENAAELKIGDEFLKAKCLMNCEVAVILEHKYEQLQQMSDDPLNQVSQVFEKSL 59

Query: 243 QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAH 422
           QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAH
Sbjct: 60  QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAH 119

Query: 423 DDEAIEKMLNDLSLIKKFE 479
           DDEAIEKMLNDLSLIKKFE
Sbjct: 120 DDEAIEKMLNDLSLIKKFE 138


>ref|XP_002307132.1| predicted protein [Populus trichocarpa]
           gi|224096326|ref|XP_002310604.1| predicted protein
           [Populus trichocarpa] gi|222853507|gb|EEE91054.1|
           predicted protein [Populus trichocarpa]
           gi|222856581|gb|EEE94128.1| predicted protein [Populus
           trichocarpa]
          Length = 138

 Score =  260 bits (664), Expect = 2e-67
 Identities = 131/139 (94%), Positives = 137/139 (98%)
 Frame = +3

Query: 63  MSGQEEEENAAELKIPDEFLKAKCLMNCEVSIILEHKYEQLQQMADDPMNQMSQVFEKSL 242
           MSG EEEENAAELKI D+FLKAKCLMNCEV++ILEHKYEQLQQM+DDPMNQ+SQVFEKSL
Sbjct: 1   MSG-EEEENAAELKIGDDFLKAKCLMNCEVALILEHKYEQLQQMSDDPMNQVSQVFEKSL 59

Query: 243 QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAH 422
           QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAH
Sbjct: 60  QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAH 119

Query: 423 DDEAIEKMLNDLSLIKKFE 479
           DDEAIEKMLNDLSLIKKFE
Sbjct: 120 DDEAIEKMLNDLSLIKKFE 138


>gb|AFK35928.1| unknown [Lotus japonicus]
          Length = 138

 Score =  257 bits (656), Expect = 2e-66
 Identities = 131/139 (94%), Positives = 135/139 (97%)
 Frame = +3

Query: 63  MSGQEEEENAAELKIPDEFLKAKCLMNCEVSIILEHKYEQLQQMADDPMNQMSQVFEKSL 242
           MSG EEEENAAELKI DEFLKAKCLMNCEVS+ILEHKYEQLQQ +DDPMNQ+SQVFEKSL
Sbjct: 1   MSG-EEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQSSDDPMNQVSQVFEKSL 59

Query: 243 QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAH 422
           QYVKRFSRYKNPDAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRA 
Sbjct: 60  QYVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAQ 119

Query: 423 DDEAIEKMLNDLSLIKKFE 479
           DDEAIEKMLNDLSLIKKFE
Sbjct: 120 DDEAIEKMLNDLSLIKKFE 138


>ref|NP_001237937.1| uncharacterized protein LOC100499661 [Glycine max]
           gi|255625623|gb|ACU13156.1| unknown [Glycine max]
          Length = 138

 Score =  255 bits (652), Expect = 6e-66
 Identities = 130/139 (93%), Positives = 135/139 (97%)
 Frame = +3

Query: 63  MSGQEEEENAAELKIPDEFLKAKCLMNCEVSIILEHKYEQLQQMADDPMNQMSQVFEKSL 242
           MSG EEEENAAELKI DEFLKAKCLMNCEVS+ILEHKYEQLQQ +DDPMNQ+SQVFEKSL
Sbjct: 1   MSG-EEEENAAELKIGDEFLKAKCLMNCEVSLILEHKYEQLQQTSDDPMNQISQVFEKSL 59

Query: 243 QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAH 422
           QYVKRFSRYKNPDAVRQVREIL+RYQLAEFELCVLGNLCPETVEEAIAMVPSIK+RGRA 
Sbjct: 60  QYVKRFSRYKNPDAVRQVREILARYQLAEFELCVLGNLCPETVEEAIAMVPSIKSRGRAQ 119

Query: 423 DDEAIEKMLNDLSLIKKFE 479
           DDEAIEKMLNDLSLIKKFE
Sbjct: 120 DDEAIEKMLNDLSLIKKFE 138


>ref|XP_002522014.1| DNA-directed RNA polymerase II, putative [Ricinus communis]
           gi|223538818|gb|EEF40418.1| DNA-directed RNA polymerase
           II, putative [Ricinus communis]
          Length = 138

 Score =  255 bits (651), Expect = 7e-66
 Identities = 128/139 (92%), Positives = 136/139 (97%)
 Frame = +3

Query: 63  MSGQEEEENAAELKIPDEFLKAKCLMNCEVSIILEHKYEQLQQMADDPMNQMSQVFEKSL 242
           MSG EEEENA+ELKI DEFLKAKCLMNCEV++ILEHKYEQLQQM++DPMNQ+SQVFEKSL
Sbjct: 1   MSG-EEEENASELKIGDEFLKAKCLMNCEVALILEHKYEQLQQMSNDPMNQVSQVFEKSL 59

Query: 243 QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTRGRAH 422
           QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKT+GRAH
Sbjct: 60  QYVKRFSRYKNPDAVRQVREILSRYQLAEFELCVLGNLCPETVEEAIAMVPSIKTKGRAH 119

Query: 423 DDEAIEKMLNDLSLIKKFE 479
           DDEAIEKML DLS+IKKFE
Sbjct: 120 DDEAIEKMLTDLSMIKKFE 138


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