BLASTX nr result

ID: Scutellaria22_contig00014588 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00014588
         (1117 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002322279.1| chromatin remodeling complex subunit [Populu...   110   5e-22
ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vi...   106   9e-21
emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]   105   2e-20
ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik...   103   1e-19
ref|XP_003523412.1| PREDICTED: SWI/SNF complex subunit SWI3A-lik...    97   7e-18

>ref|XP_002322279.1| chromatin remodeling complex subunit [Populus trichocarpa]
           gi|222869275|gb|EEF06406.1| chromatin remodeling complex
           subunit [Populus trichocarpa]
          Length = 570

 Score =  110 bits (276), Expect = 5e-22
 Identities = 59/123 (47%), Positives = 82/123 (66%), Gaps = 2/123 (1%)
 Frame = +3

Query: 3   LMQLPFGDLMLGAGYRKGRYLDVIGDVSNSKIVGSASNESQEPMKADDSITE-LQKDQQN 179
           L++LPFGDL+L + Y KG     IG  +NSK V +A +E Q+  K +D + E +  +++ 
Sbjct: 290 LIELPFGDLILSSTYGKGNSSGQIGSTNNSKQVPAAPSEHQDDTKHEDQLHEQMNANEEK 349

Query: 180 GDAKSEGPPLKRA-CTRASDAGSSLMKQVNRISTMLGPQVTASAADAAITSLCYENQCSK 356
           GD   +GP LKR   T  SDAG SLMKQV  ISTM+GP +TA+AA+AA+ +LC E  C +
Sbjct: 350 GDVMDDGPLLKRRRITSVSDAGGSLMKQVALISTMVGPDITAAAAEAAVAALCDETACPR 409

Query: 357 ELF 365
           E+F
Sbjct: 410 EIF 412



 Score = 57.4 bits (137), Expect(2) = 2e-09
 Identities = 25/41 (60%), Positives = 36/41 (87%)
 Frame = +2

Query: 752 DKEEREMGHLVANMIEAQVKKLQHKLKYFDDLEVIMEKEDA 874
           D+E+RE+ +L+A ++E Q+KKL HK+K+FDDLE+IMEKE A
Sbjct: 488 DQEDREVENLMATIVETQLKKLHHKIKHFDDLELIMEKEYA 528



 Score = 32.0 bits (71), Expect(2) = 2e-09
 Identities = 13/23 (56%), Positives = 18/23 (78%)
 Frame = +1

Query: 994  ERLNVLQRIFSAAISKSKEHTPL 1062
            ER++VLQR   A ISKS++H P+
Sbjct: 540  ERIDVLQRAIRAGISKSRDHAPI 562


>ref|XP_002280389.1| PREDICTED: SWI/SNF complex subunit SWI3A [Vitis vinifera]
           gi|297734457|emb|CBI15704.3| unnamed protein product
           [Vitis vinifera]
          Length = 563

 Score =  106 bits (265), Expect = 9e-21
 Identities = 63/126 (50%), Positives = 84/126 (66%), Gaps = 5/126 (3%)
 Frame = +3

Query: 3   LMQLPFGDLMLGAGYRKGRYLDVIGDVSNSKIVGSASNESQEPMK----ADDSITELQKD 170
           L++LPFG+LMLG+   K R      D ++S      S ESQE +K     D+ I E    
Sbjct: 286 LIELPFGELMLGSSLGKSR---ASNDNTSSIKPVQTSLESQENIKNGGQGDEQINE---S 339

Query: 171 QQNGDAKSEGPPLKRAC-TRASDAGSSLMKQVNRISTMLGPQVTASAADAAITSLCYENQ 347
           +QNGDA+++GPPLKR C T  SDAG SLM+QV  ISTM+GP ++A+AADAA+ +LC EN 
Sbjct: 340 EQNGDAENQGPPLKRKCITSLSDAGISLMRQVAVISTMVGPHISAAAADAAVAALCDENP 399

Query: 348 CSKELF 365
           C K++F
Sbjct: 400 CVKDIF 405


>emb|CAN80839.1| hypothetical protein VITISV_043833 [Vitis vinifera]
          Length = 563

 Score =  105 bits (262), Expect = 2e-20
 Identities = 63/126 (50%), Positives = 83/126 (65%), Gaps = 5/126 (3%)
 Frame = +3

Query: 3   LMQLPFGDLMLGAGYRKGRYLDVIGDVSNSKIVGSASNESQEPMK----ADDSITELQKD 170
           L++LPFG+LMLG+   K R      D ++S      S ESQE +K     D+ I E    
Sbjct: 286 LIELPFGELMLGSSLGKSR---ASNDNTSSIKPVQTSLESQENIKNGGQGDEQINE---S 339

Query: 171 QQNGDAKSEGPPLKRAC-TRASDAGSSLMKQVNRISTMLGPQVTASAADAAITSLCYENQ 347
           +QNGDA+++GPPLKR C T  SDAG SLM QV  ISTM+GP ++A+AADAA+ +LC EN 
Sbjct: 340 EQNGDAENQGPPLKRKCITSLSDAGISLMXQVAVISTMVGPHISAAAADAAVAALCDENP 399

Query: 348 CSKELF 365
           C K++F
Sbjct: 400 CVKDIF 405


>ref|XP_003527961.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Glycine max]
          Length = 522

 Score =  103 bits (256), Expect = 1e-19
 Identities = 54/122 (44%), Positives = 80/122 (65%), Gaps = 1/122 (0%)
 Frame = +3

Query: 3   LMQLPFGDLMLGAGYRKGRYLDVIGDVSNSKIVGSASNESQEPMKADDSITEL-QKDQQN 179
           L++LPFG+LMLG  +R     D  G V+N+K V S+S+++QE  K  D   E   +++QN
Sbjct: 281 LIELPFGELMLGPAHRNVNINDANGIVNNAKQVQSSSSDNQEISKTKDQSPEFTNENEQN 340

Query: 180 GDAKSEGPPLKRACTRASDAGSSLMKQVNRISTMLGPQVTASAADAAITSLCYENQCSKE 359
           GDA  E P  ++     SD+ SSLM QV  IS ++ P +TA+AADAA+++LC E+ C +E
Sbjct: 341 GDAVKESPSKRQRVASLSDSSSSLMNQVGLISNVVDPHITAAAADAAVSALCDEDLCPRE 400

Query: 360 LF 365
           +F
Sbjct: 401 IF 402


>ref|XP_003523412.1| PREDICTED: SWI/SNF complex subunit SWI3A-like [Glycine max]
          Length = 527

 Score = 97.1 bits (240), Expect = 7e-18
 Identities = 51/122 (41%), Positives = 79/122 (64%), Gaps = 1/122 (0%)
 Frame = +3

Query: 3   LMQLPFGDLMLGAGYRKGRYLDVIGDVSNSKIVGSASNESQEPMKADDSITEL-QKDQQN 179
           L++LPFG+LMLG  ++        G ++N+K V S+S+++QE  K  D   EL  +++QN
Sbjct: 277 LIELPFGELMLGPTHKNVNINGANGIMNNAKQVQSSSSDNQEISKTKDQTPELTNENEQN 336

Query: 180 GDAKSEGPPLKRACTRASDAGSSLMKQVNRISTMLGPQVTASAADAAITSLCYENQCSKE 359
           GDA  E P  ++     SD+ S LM QV  IS ++ P +TA+AADAA+++LC E+ C +E
Sbjct: 337 GDAVKESPSKRQRVAALSDSSSLLMNQVGLISNVVDPHITAAAADAAVSALCDEDLCPRE 396

Query: 360 LF 365
           +F
Sbjct: 397 IF 398


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