BLASTX nr result

ID: Scutellaria22_contig00014433 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00014433
         (268 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004148060.1| PREDICTED: pentatricopeptide repeat-containi...    90   2e-16
emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]    89   5e-16
ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containi...    77   1e-12
emb|CBI38358.3| unnamed protein product [Vitis vinifera]               77   1e-12
ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containi...    74   1e-11

>ref|XP_004148060.1| PREDICTED: pentatricopeptide repeat-containing protein
           At1g08070-like [Cucumis sativus]
          Length = 471

 Score = 89.7 bits (221), Expect = 2e-16
 Identities = 49/99 (49%), Positives = 63/99 (63%), Gaps = 10/99 (10%)
 Frame = +2

Query: 2   FHMFPTTPNS----------SFCLQSLQFFIEKCSSMRQLKSLEAQIILRGLTHDAISLS 151
           FH  PT P++          S   QSL F +EKCSSMR+LK L A+IIL+GL    I+L 
Sbjct: 21  FHSVPTHPSANNSTSPLDFKSSVHQSLDFSLEKCSSMRELKVLHARIILQGLVSQNITLG 80

Query: 152 KLISFAALSSSGDPLYALYLFDEIPQPNRHMYNTLIRAF 268
           KLISF ++S  GD  YA  +FD +PQPN+ M+N LIR +
Sbjct: 81  KLISFCSVSQVGDLHYAHLVFDHLPQPNKFMFNCLIRGY 119


>emb|CAN61826.1| hypothetical protein VITISV_027628 [Vitis vinifera]
          Length = 688

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 46/81 (56%), Positives = 57/81 (70%)
 Frame = +2

Query: 26  NSSFCLQSLQFFIEKCSSMRQLKSLEAQIILRGLTHDAISLSKLISFAALSSSGDPLYAL 205
           N S C   L    EKCSSMR LK L AQIIL GLT++ ++L KLISF A+  +GD  YA 
Sbjct: 112 NGSHCPARL---CEKCSSMRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQ 168

Query: 206 YLFDEIPQPNRHMYNTLIRAF 268
            +FD+IPQPN+ MYN+LIR +
Sbjct: 169 RMFDQIPQPNKFMYNSLIRGY 189


>ref|XP_003635090.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Vitis vinifera]
          Length = 616

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/63 (58%), Positives = 48/63 (76%)
 Frame = +2

Query: 80  MRQLKSLEAQIILRGLTHDAISLSKLISFAALSSSGDPLYALYLFDEIPQPNRHMYNTLI 259
           MR LK L AQIIL GLT++ ++L KLISF A+  +GD  YA  +FD+IPQPN+ MYN+LI
Sbjct: 1   MRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 60

Query: 260 RAF 268
           R +
Sbjct: 61  RGY 63


>emb|CBI38358.3| unnamed protein product [Vitis vinifera]
          Length = 549

 Score = 77.4 bits (189), Expect = 1e-12
 Identities = 37/63 (58%), Positives = 48/63 (76%)
 Frame = +2

Query: 80  MRQLKSLEAQIILRGLTHDAISLSKLISFAALSSSGDPLYALYLFDEIPQPNRHMYNTLI 259
           MR LK L AQIIL GLT++ ++L KLISF A+  +GD  YA  +FD+IPQPN+ MYN+LI
Sbjct: 1   MRGLKLLHAQIILHGLTNETLTLGKLISFCAVDDAGDLQYAQRMFDQIPQPNKFMYNSLI 60

Query: 260 RAF 268
           R +
Sbjct: 61  RGY 63


>ref|XP_003516589.1| PREDICTED: pentatricopeptide repeat-containing protein At2g29760,
           chloroplastic-like [Glycine max]
          Length = 667

 Score = 73.9 bits (180), Expect = 1e-11
 Identities = 37/75 (49%), Positives = 50/75 (66%)
 Frame = +2

Query: 44  QSLQFFIEKCSSMRQLKSLEAQIILRGLTHDAISLSKLISFAALSSSGDPLYALYLFDEI 223
           Q+L   +++CSSM++LK + AQIIL GL    ++L KL+S       GD  YA  LFD+I
Sbjct: 40  QTLHHLLDQCSSMKRLKLVHAQIILHGLAAQVVTLGKLLSLCV--QEGDLRYAHLLFDQI 97

Query: 224 PQPNRHMYNTLIRAF 268
           PQPN+ MYN LIR +
Sbjct: 98  PQPNKFMYNHLIRGY 112


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