BLASTX nr result

ID: Scutellaria22_contig00014280 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00014280
         (221 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002510970.1| ubiquitin-protein ligase, putative [Ricinus ...    66   3e-09
ref|XP_004146919.1| PREDICTED: F-box protein At5g07670-like [Cuc...    65   6e-09
ref|XP_004169110.1| PREDICTED: F-box protein At5g07670-like [Cuc...    63   3e-08
ref|XP_004146920.1| PREDICTED: F-box protein At5g07670-like [Cuc...    63   3e-08
ref|XP_002303496.1| f-box family protein [Populus trichocarpa] g...    60   1e-07

>ref|XP_002510970.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223550085|gb|EEF51572.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 531

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 37/80 (46%), Positives = 50/80 (62%), Gaps = 8/80 (10%)
 Frame = -1

Query: 218 NVLFAMRRHSLTPRNQTDETVPFPPLVTKIQDSTLTD--------LVFSDEILLKILSKL 63
           +V+FAM+  SL     T++       +TK +D TL          L+ SDE+LLKILS L
Sbjct: 39  HVVFAMQLQSLASPTPTNDKDSKTKNITKTKDQTLISNFSNSDRTLLLSDELLLKILSTL 98

Query: 62  PESQRNANFLVSKRWLNLQG 3
           P++Q+N NFLV KRWLN+QG
Sbjct: 99  PDTQKNHNFLVCKRWLNVQG 118


>ref|XP_004146919.1| PREDICTED: F-box protein At5g07670-like [Cucumis sativus]
           gi|449524196|ref|XP_004169109.1| PREDICTED: F-box
           protein At5g07670-like [Cucumis sativus]
          Length = 526

 Score = 65.1 bits (157), Expect = 6e-09
 Identities = 39/76 (51%), Positives = 50/76 (65%), Gaps = 4/76 (5%)
 Frame = -1

Query: 218 NVLFAMRRHSLTPRNQTDETVPFPPLVTK--IQDSTLTD--LVFSDEILLKILSKLPESQ 51
           NV+ AM+  S +     D  +P P   TK  + +    D  L+ SDE+LL+ILSKLP+SQ
Sbjct: 57  NVILAMKLQSFSK----DSHIPTPNSKTKPLLANFCKIDRTLLLSDELLLRILSKLPDSQ 112

Query: 50  RNANFLVSKRWLNLQG 3
           RN+NFLV KRWLNLQG
Sbjct: 113 RNSNFLVCKRWLNLQG 128


>ref|XP_004169110.1| PREDICTED: F-box protein At5g07670-like [Cucumis sativus]
          Length = 442

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
 Frame = -1

Query: 203 MRRHSLTPRNQTDETVPFPPLVTKIQDSTLTD--LVFSDEILLKILSKLPESQRNANFLV 30
           MR HSL+    +D  +  P    K   S L D  L+ SDE+LL++ SKLP+SQRN+NFLV
Sbjct: 1   MRLHSLS----SDSPISSPDSKPKSPVSNLIDFTLLLSDELLLRVFSKLPDSQRNSNFLV 56

Query: 29  SKRWLNLQG 3
            KRWL LQG
Sbjct: 57  CKRWLYLQG 65


>ref|XP_004146920.1| PREDICTED: F-box protein At5g07670-like [Cucumis sativus]
          Length = 442

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 36/69 (52%), Positives = 45/69 (65%), Gaps = 2/69 (2%)
 Frame = -1

Query: 203 MRRHSLTPRNQTDETVPFPPLVTKIQDSTLTD--LVFSDEILLKILSKLPESQRNANFLV 30
           MR HSL+    +D  +  P    K   S L D  L+ SDE+LL++ SKLP+SQRN+NFLV
Sbjct: 1   MRLHSLS----SDSPISSPDSKPKSPVSNLIDFTLLLSDELLLRVFSKLPDSQRNSNFLV 56

Query: 29  SKRWLNLQG 3
            KRWL LQG
Sbjct: 57  CKRWLYLQG 65


>ref|XP_002303496.1| f-box family protein [Populus trichocarpa]
           gi|222840928|gb|EEE78475.1| f-box family protein
           [Populus trichocarpa]
          Length = 551

 Score = 60.5 bits (145), Expect = 1e-07
 Identities = 41/96 (42%), Positives = 52/96 (54%), Gaps = 24/96 (25%)
 Frame = -1

Query: 218 NVLFAMRRHSL--------------TPRNQTDETVPFPPLVTKIQDSTLT---------- 111
           +V+FAM+  SL              TP++Q  +     P  TK +D T T          
Sbjct: 30  HVIFAMQLQSLSNPTTPTPTPTPTPTPKHQQQKQQQTDP-PTKFKDKTGTLISNLPHIDR 88

Query: 110 DLVFSDEILLKILSKLPESQRNANFLVSKRWLNLQG 3
            L+  D++LLKILSKLP+SQRN N LV KRWLNLQG
Sbjct: 89  TLLLGDDLLLKILSKLPDSQRNPNSLVCKRWLNLQG 124


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