BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00014187
         (824 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containi...   357   2e-96
ref|XP_002524479.1| pentatricopeptide repeat-containing protein,...   347   2e-93
ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containi...   330   3e-88
ref|XP_003627685.1| Pentatricopeptide repeat-containing protein ...   319   5e-85
ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|2...   315   1e-83

>ref|XP_002281953.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
            mitochondrial [Vitis vinifera]
          Length = 773

 Score =  357 bits (915), Expect = 2e-96
 Identities = 170/273 (62%), Positives = 215/273 (78%)
 Frame = -2

Query: 820  CADGEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSW 641
            C+D E F  GFQLH  +LK GL  E F+GNALITMYS+C R+++A R+F+EM+NKD VSW
Sbjct: 186  CSDHEGFIFGFQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSW 245

Query: 640  NAILSGYAQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSL 461
            NA+LSGYAQEG+ GLE IL F+EM K  M+LDHVS T  ISACG  +  + G+Q+H L++
Sbjct: 246  NAMLSGYAQEGNSGLEAILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAV 305

Query: 460  KRGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSINEEDAVSLFKEM 281
            K GY  HV VCNVL+S Y KC  +EDA LVFE+I DRNV+SWTTM+SI+EEDA SLF EM
Sbjct: 306  KIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSWTTMISISEEDATSLFNEM 365

Query: 280  IRDEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANSFITMYGKFKLV 101
             RD + PNDVTFVGLIH I+ + +++EG M+H  CVK++FLSE+NV+NS ITMY KF+ +
Sbjct: 366  RRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCVKTSFLSELNVSNSLITMYAKFESM 425

Query: 100  EDCVKVFEELDCRGIISWNALISAYSLNGMYQE 2
             D +KVFEEL+ R IISWN+LIS Y+ NG++QE
Sbjct: 426  SDSMKVFEELNYREIISWNSLISGYAQNGLWQE 458



 Score =  132 bits (333), Expect = 7e-29
 Identities = 80/270 (29%), Positives = 136/270 (50%), Gaps = 7/270 (2%)
 Frame = -2

Query: 820 CADGEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSW 641
           C D +   +G Q+H   +  G  +   + N+L+ MY K G    A  +F  + N D VSW
Sbjct: 91  CGDSK---LGCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVVFENLNNPDIVSW 147

Query: 640 NAILSGYAQEGSYGLETILGF-IEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLS 464
           N +LSG+ +      +  L F + M    +  D V+ T+V++ C       FG Q+H   
Sbjct: 148 NTVLSGFQRS-----DDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFGFQLHSRI 202

Query: 463 LKRGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSINEE------DA 302
           LK G    V V N L++MY +C  + +A  VF+ + +++++SW  MLS   +      +A
Sbjct: 203 LKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQEGNSGLEA 262

Query: 301 VSLFKEMIRDEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANSFITM 122
           + +F EM+++ +  + V+F G I         + G  +H+  VK  + + + V N  I+ 
Sbjct: 263 ILVFLEMLKEGMKLDHVSFTGAISACGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLIST 322

Query: 121 YGKFKLVEDCVKVFEELDCRGIISWNALIS 32
           Y K + +ED   VFE +  R ++SW  +IS
Sbjct: 323 YSKCEDIEDAKLVFESIIDRNVVSWTTMIS 352



 Score =  124 bits (312), Expect = 2e-26
 Identities = 79/280 (28%), Positives = 152/280 (54%), Gaps = 8/280 (2%)
 Frame = -2

Query: 820  CADGEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSW 641
            C  G+EF++G Q+H L +K+G      + N LI+ YSKC  + DA  +F  + +++ VSW
Sbjct: 288  CGHGKEFELGRQIHSLAVKIGYDTHVKVCNVLISTYSKCEDIEDAKLVFESIIDRNVVSW 347

Query: 640  NAILSGYAQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSL 461
              ++S  ++E +  L     F EM +  +  + V+   +I A   +  ++ G+ +HG+ +
Sbjct: 348  TTMIS-ISEEDATSL-----FNEMRRDGVYPNDVTFVGLIHAITMKNLVEEGQMIHGVCV 401

Query: 460  KRGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSINEEDAVSLFKEM 281
            K  + + + V N L++MY K   + D+  VFE +  R +ISW +++S   ++   L++E 
Sbjct: 402  KTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQNG--LWQEA 459

Query: 280  IRD------EICPNDVTFVGLIHTI-SKQGI-MQEGLMVHAFCVKSNFLSEINVANSFIT 125
            ++       E  PN+ TF  ++ +I S + I M+ G   H+  +K    +   V+++ + 
Sbjct: 460  LQTFLSALMESRPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLNTNPIVSSALLD 519

Query: 124  MYGKFKLVEDCVKVFEELDCRGIISWNALISAYSLNGMYQ 5
            MY K   + + + VF E   +  ++W A+ISA++ +G Y+
Sbjct: 520  MYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYE 559



 Score =  102 bits (253), Expect = 1e-19
 Identities = 62/221 (28%), Positives = 120/221 (54%), Gaps = 9/221 (4%)
 Frame = -2

Query: 793  GFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSWNAILSGYAQ 614
            G  +H + +K    +E  + N+LITMY+K   + D+ ++F E+  ++ +SWN+++SGYAQ
Sbjct: 393  GQMIHGVCVKTSFLSELNVSNSLITMYAKFESMSDSMKVFEELNYREIISWNSLISGYAQ 452

Query: 613  EGSY--GLETILGFIEMAKGAMRLDHVSLTSVIS--ACGQERNLDFGKQVHGLSLKRGYG 446
             G +   L+T L  +  +    R +  +  SV+S  A  +  ++  G++ H   LK G  
Sbjct: 453  NGLWQEALQTFLSALMES----RPNEFTFGSVLSSIASAEAISMRHGQRCHSHILKLGLN 508

Query: 445  NHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSINE-----EDAVSLFKEM 281
             +  V + L+ MY K G + ++  VF     +N ++WT ++S +      E  ++LFK+M
Sbjct: 509  TNPIVSSALLDMYAKRGSICESLGVFSETPLKNEVAWTAIISAHARHGDYEAVMNLFKDM 568

Query: 280  IRDEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFL 158
             R+ + P+ +TF+ +I    ++G++  G  +    VK + +
Sbjct: 569  EREGVKPDSITFLAVITACGRKGMVDTGYQLFNSMVKDHLI 609



 Score = 99.8 bits (247), Expect = 7e-19
 Identities = 57/181 (31%), Positives = 101/181 (55%), Gaps = 2/181 (1%)
 Frame = -2

Query: 550 LDHVSLTSVISACGQERNLDFGKQVHGLSLKRGYGNHVTVCNVLMSMYYKCGIVEDAHLV 371
           +D V++  V+ AC  +  L  G Q+H  ++  G+ +HVTV N LM+MY K G+ + A +V
Sbjct: 78  IDQVTVAIVLKACCGDSKL--GCQIHAFAISSGFISHVTVPNSLMNMYCKAGLFDRALVV 135

Query: 370 FENIFDRNVISWTTMLS--INEEDAVSLFKEMIRDEICPNDVTFVGLIHTISKQGIMQEG 197
           FEN+ + +++SW T+LS     +DA++    M    +  + VT   ++   S       G
Sbjct: 136 FENLNNPDIVSWNTVLSGFQRSDDALNFALRMNFTGVAFDAVTCTTVLAFCSDHEGFIFG 195

Query: 196 LMVHAFCVKSNFLSEINVANSFITMYGKFKLVEDCVKVFEELDCRGIISWNALISAYSLN 17
             +H+  +K     E+ V N+ ITMY +   + +  +VF+E+  + ++SWNA++S Y+  
Sbjct: 196 FQLHSRILKCGLDCEVFVGNALITMYSRCCRLVEARRVFDEMRNKDLVSWNAMLSGYAQE 255

Query: 16  G 14
           G
Sbjct: 256 G 256


>ref|XP_002524479.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223536267|gb|EEF37919.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 576

 Score =  347 bits (890), Expect = 2e-93
 Identities = 171/273 (62%), Positives = 209/273 (76%)
 Frame = -2

Query: 820  CADGEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSW 641
            C+  EEF  G QLH  +LK+GL  E F+GNALITMYS+ G +++AGR+F EMQ  D VSW
Sbjct: 186  CSRIEEFLFGLQLHSCILKVGLDCEVFVGNALITMYSRWGCLLEAGRVFEEMQTTDLVSW 245

Query: 640  NAILSGYAQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSL 461
            NAI+SGY Q G YGLE I  FIEM +  ++LDHVS TS ISACG ERNL+ G+QVHGLS+
Sbjct: 246  NAIISGYTQAGIYGLEAISIFIEMVRRGIKLDHVSFTSAISACGHERNLEVGRQVHGLSI 305

Query: 460  KRGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSINEEDAVSLFKEM 281
            KRGYG HV+V NVL+S Y KC I+EDA LVF+N+ +RNV+SWTTM+SI+EE+AVS F EM
Sbjct: 306  KRGYGKHVSVGNVLISTYSKCEIIEDAKLVFQNMLERNVVSWTTMISIDEENAVSFFNEM 365

Query: 280  IRDEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANSFITMYGKFKLV 101
              DE+ PNDVTFVGLIH I+   +++ G  VH FC+KS F  E +V NSFITMY KF   
Sbjct: 366  RYDEVDPNDVTFVGLIHAITIGDLVESGKTVHGFCIKSGFSLEPSVQNSFITMYAKFGSA 425

Query: 100  EDCVKVFEELDCRGIISWNALISAYSLNGMYQE 2
            ED +KVFEEL+ R II+WNALIS Y+ NG+ QE
Sbjct: 426  EDSMKVFEELNYREIITWNALISGYAQNGLSQE 458



 Score =  134 bits (336), Expect = 3e-29
 Identities = 80/262 (30%), Positives = 136/262 (51%), Gaps = 7/262 (2%)
 Frame = -2

Query: 796 IGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSWNAILSGYA 617
           +G Q+H   +  GL +   + N+L+ MY K G+   A  +F  + + D VSWN +LSG+ 
Sbjct: 96  LGSQIHGFAITSGLYSFITVPNSLMNMYCKSGQFTHALCIFETLNDPDIVSWNTVLSGFQ 155

Query: 616 QEGSYGLETILGF-IEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSLKRGYGNH 440
           +      E  L F ++M    +  D V+ T+V++ C +     FG Q+H   LK G    
Sbjct: 156 RS-----EEALNFALKMNSNGVVFDAVTYTTVLAFCSRIEEFLFGLQLHSCILKVGLDCE 210

Query: 439 VTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLS------INEEDAVSLFKEMI 278
           V V N L++MY + G + +A  VFE +   +++SW  ++S      I   +A+S+F EM+
Sbjct: 211 VFVGNALITMYSRWGCLLEAGRVFEEMQTTDLVSWNAIISGYTQAGIYGLEAISIFIEMV 270

Query: 277 RDEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANSFITMYGKFKLVE 98
           R  I  + V+F   I     +  ++ G  VH   +K  +   ++V N  I+ Y K +++E
Sbjct: 271 RRGIKLDHVSFTSAISACGHERNLEVGRQVHGLSIKRGYGKHVSVGNVLISTYSKCEIIE 330

Query: 97  DCVKVFEELDCRGIISWNALIS 32
           D   VF+ +  R ++SW  +IS
Sbjct: 331 DAKLVFQNMLERNVVSWTTMIS 352



 Score =  104 bits (259), Expect = 3e-20
 Identities = 70/244 (28%), Positives = 120/244 (49%), Gaps = 8/244 (3%)
 Frame = -2

Query: 820 CADGEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSW 641
           C      ++G Q+H L +K G      +GN LI+ YSKC  + DA  +F  M  ++ VSW
Sbjct: 288 CGHERNLEVGRQVHGLSIKRGYGKHVSVGNVLISTYSKCEIIEDAKLVFQNMLERNVVSW 347

Query: 640 NAILSGYAQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSL 461
             ++S   +E +        F EM    +  + V+   +I A      ++ GK VHG  +
Sbjct: 348 TTMIS-IDEENAVSF-----FNEMRYDEVDPNDVTFVGLIHAITIGDLVESGKTVHGFCI 401

Query: 460 KRGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLS------INEEDAV 299
           K G+    +V N  ++MY K G  ED+  VFE +  R +I+W  ++S      +++E  +
Sbjct: 402 KSGFSLEPSVQNSFITMYAKFGSAEDSMKVFEELNYREIITWNALISGYAQNGLSQEAII 461

Query: 298 SLFKEMIRDEICPNDVTFVGLIHTI--SKQGIMQEGLMVHAFCVKSNFLSEINVANSFIT 125
           + F  +   +  PN  TF  ++  I  ++   ++ G M HA  +K  F S+  V+++ + 
Sbjct: 462 TFFSALAESK--PNQYTFGSVLSAIGAAEDISLKHGQMCHAQIMKLGFNSDPVVSSALLD 519

Query: 124 MYGK 113
           MY K
Sbjct: 520 MYAK 523



 Score =  102 bits (254), Expect = 1e-19
 Identities = 57/183 (31%), Positives = 103/183 (56%), Gaps = 2/183 (1%)
 Frame = -2

Query: 550 LDHVSLTSVISACGQERNLDFGKQVHGLSLKRGYGNHVTVCNVLMSMYYKCGIVEDAHLV 371
           +D V++   + +C  ++ L  G Q+HG ++  G  + +TV N LM+MY K G    A  +
Sbjct: 78  IDEVTIALALKSCCGDKLL--GSQIHGFAITSGLYSFITVPNSLMNMYCKSGQFTHALCI 135

Query: 370 FENIFDRNVISWTTMLS--INEEDAVSLFKEMIRDEICPNDVTFVGLIHTISKQGIMQEG 197
           FE + D +++SW T+LS     E+A++   +M  + +  + VT+  ++   S+      G
Sbjct: 136 FETLNDPDIVSWNTVLSGFQRSEEALNFALKMNSNGVVFDAVTYTTVLAFCSRIEEFLFG 195

Query: 196 LMVHAFCVKSNFLSEINVANSFITMYGKFKLVEDCVKVFEELDCRGIISWNALISAYSLN 17
           L +H+  +K     E+ V N+ ITMY ++  + +  +VFEE+    ++SWNA+IS Y+  
Sbjct: 196 LQLHSCILKVGLDCEVFVGNALITMYSRWGCLLEAGRVFEEMQTTDLVSWNAIISGYTQA 255

Query: 16  GMY 8
           G+Y
Sbjct: 256 GIY 258


>ref|XP_003521943.1| PREDICTED: pentatricopeptide repeat-containing protein At4g32430,
            mitochondrial-like [Glycine max]
          Length = 895

 Score =  330 bits (845), Expect = 3e-88
 Identities = 157/274 (57%), Positives = 206/274 (75%), Gaps = 1/274 (0%)
 Frame = -2

Query: 820  CADGEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSW 641
            C     F  G+QLH LV+K GL  E FIGNAL+TMYS+ G + +A R+F+EM  +D VSW
Sbjct: 185  CWGDHGFLFGWQLHSLVVKCGLGCEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSW 244

Query: 640  NAILSGYAQEGS-YGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLS 464
            NA++SGYAQEG  YGLE +L F+ M +  M +DHVSLT  +SACG  +NL+ G+Q+HGL+
Sbjct: 245  NAMISGYAQEGKCYGLEAVLLFVNMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLT 304

Query: 463  LKRGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSINEEDAVSLFKE 284
             K GYG HV+VCNVLMS Y KC + +DA  VFE+I +RNV+SWTTM+SI+EEDAVSLF  
Sbjct: 305  QKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSWTTMISIDEEDAVSLFNA 364

Query: 283  MIRDEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANSFITMYGKFKL 104
            M  + + PNDVTF+GLIH ++ + ++ EGL +H  C+KS FLSE  V+NSFITMY KF+ 
Sbjct: 365  MRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCIKSCFLSEQTVSNSFITMYAKFEC 424

Query: 103  VEDCVKVFEELDCRGIISWNALISAYSLNGMYQE 2
            +++  K+FEEL+CR  +SWNALIS Y+ NG Y+E
Sbjct: 425  IQESTKIFEELNCRETVSWNALISGYAQNGSYKE 458



 Score =  127 bits (319), Expect = 3e-27
 Identities = 77/284 (27%), Positives = 140/284 (49%), Gaps = 18/284 (6%)
 Frame = -2

Query: 805 EFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSWNAILS 626
           E  +G Q+H   +  G  +   + N+L+ MY K G    A  +F  + + D VSWN +LS
Sbjct: 92  ESKLGCQIHGFAVCSGFVSFVTVSNSLMKMYCKSGNFGKALIVFENLSHPDIVSWNTVLS 151

Query: 625 GYAQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSLKRGYG 446
           G+ +     ++ +     M    +  D V+ TS ++ C  +    FG Q+H L +K G G
Sbjct: 152 GFEES----VDALNFARSMHYCGIAFDPVTYTSALAFCWGDHGFLFGWQLHSLVVKCGLG 207

Query: 445 NHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSINEE-------DAVSLFK 287
             V + N L++MY + G++++A  VF+ + +R+++SW  M+S   +       +AV LF 
Sbjct: 208 CEVFIGNALVTMYSRWGMLDEARRVFDEMPERDLVSWNAMISGYAQEGKCYGLEAVLLFV 267

Query: 286 EMIRDEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANSFITMYGKFK 107
            M+R  +  + V+  G +        ++ G  +H    K  + + ++V N  ++ Y K +
Sbjct: 268 NMVRHGMLIDHVSLTGAVSACGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCE 327

Query: 106 LVEDCVKVFEELDCRGIISWNALIS-----------AYSLNGMY 8
           + +D   VFE +  R ++SW  +IS           A  +NG+Y
Sbjct: 328 VPKDAKAVFESISNRNVVSWTTMISIDEEDAVSLFNAMRVNGVY 371



 Score =  115 bits (287), Expect = 2e-23
 Identities = 70/249 (28%), Positives = 132/249 (53%), Gaps = 8/249 (3%)
 Frame = -2

Query: 793  GFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSWNAILSGYAQ 614
            G  +H L +K    +E  + N+ ITMY+K   + ++ ++F E+  ++ VSWNA++SGYAQ
Sbjct: 393  GLTIHGLCIKSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISGYAQ 452

Query: 613  EGSYGLETILGFIEMAKGAMRLDHVSLTSVISA--CGQERNLDFGKQVHGLSLKRGYGNH 440
             GSY  E +L ++   K  ++ +  +  SV++A    ++ +L+ GK  H   LK G G  
Sbjct: 453  NGSYK-EALLTYLSAVK-EIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLGTD 510

Query: 439  VTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSI-----NEEDAVSLFKEMIR 275
              V   L+ MY K G + ++  VF    +R   +WT ++S      + E  +SL+ EM R
Sbjct: 511  PIVSGALLDMYGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGDFESVMSLYTEMER 570

Query: 274  DEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANS-FITMYGKFKLVE 98
            + I P+ +TF+ ++    ++G++  G  V    VK + +   +   S  + M G+   ++
Sbjct: 571  EGINPDSITFLSVLAACCRKGMVDAGHRVFDSMVKKHSIEPTSEHYSIMVDMLGRVGRLD 630

Query: 97   DCVKVFEEL 71
            +  ++  ++
Sbjct: 631  EAEELMHQI 639



 Score =  102 bits (255), Expect = 8e-20
 Identities = 72/279 (25%), Positives = 137/279 (49%), Gaps = 7/279 (2%)
 Frame = -2

Query: 820  CADGEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSW 641
            C   +  ++G Q+H L  K+G      + N L++ YSKC    DA  +F  + N++ VSW
Sbjct: 288  CGHMKNLELGRQIHGLTQKVGYGTHVSVCNVLMSTYSKCEVPKDAKAVFESISNRNVVSW 347

Query: 640  NAILSGYAQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSL 461
              ++S   +E +  L     F  M    +  + V+   +I A      +  G  +HGL +
Sbjct: 348  TTMIS-IDEEDAVSL-----FNAMRVNGVYPNDVTFIGLIHAVTIRNLVTEGLTIHGLCI 401

Query: 460  KRGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSI-----NEEDAVS 296
            K  + +  TV N  ++MY K   ++++  +FE +  R  +SW  ++S      + ++A+ 
Sbjct: 402  KSCFLSEQTVSNSFITMYAKFECIQESTKIFEELNCRETVSWNALISGYAQNGSYKEALL 461

Query: 295  LFKEMIRDEICPNDVTFVGLIHTIS--KQGIMQEGLMVHAFCVKSNFLSEINVANSFITM 122
             +   ++ EI PN  TF  +++ I+  +   +  G   H+  +K    ++  V+ + + M
Sbjct: 462  TYLSAVK-EIKPNQYTFGSVLNAIAAAEDISLNHGKSCHSHLLKLGLGTDPIVSGALLDM 520

Query: 121  YGKFKLVEDCVKVFEELDCRGIISWNALISAYSLNGMYQ 5
            YGK   + +  +VF E   R   +W A+ISAY+ +G ++
Sbjct: 521  YGKRGDIIESQRVFNETLERTQFAWTAIISAYARHGDFE 559


>ref|XP_003627685.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
            gi|358344437|ref|XP_003636296.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
            gi|358345563|ref|XP_003636846.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
            gi|355502231|gb|AES83434.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
            gi|355502781|gb|AES83984.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
            gi|355521707|gb|AET02161.1| Pentatricopeptide
            repeat-containing protein [Medicago truncatula]
          Length = 791

 Score =  319 bits (817), Expect = 5e-85
 Identities = 157/272 (57%), Positives = 202/272 (74%), Gaps = 1/272 (0%)
 Frame = -2

Query: 814  DGEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSWNA 635
            D   F  G QLH LV+K G   E FIGNAL+TMYS+ G + +AGR+FNEM  +D VSWNA
Sbjct: 199  DDHGFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNA 258

Query: 634  ILSGYAQEGS-YGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSLK 458
            +LSGYAQEG  YGLE +L F  M +  M LDHVSLT  ISACG  +NL+FGKQ+HGL+ K
Sbjct: 259  MLSGYAQEGECYGLEAVLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQK 318

Query: 457  RGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSINEEDAVSLFKEMI 278
             GYG HV VCNVL+S Y KC ++ DA  VF+++  RNV+SWTT++SI+EE+ VSLF  M 
Sbjct: 319  LGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSWTTLISIDEENVVSLFNAMR 378

Query: 277  RDEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANSFITMYGKFKLVE 98
             D + PNDVTF+GL+H I+ + +++EGLMVH  C+KS   SE NV+NS ITMY KF+ ++
Sbjct: 379  VDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQ 438

Query: 97   DCVKVFEELDCRGIISWNALISAYSLNGMYQE 2
            +  K+FEEL+ +G ISWNALIS Y+ NG+ +E
Sbjct: 439  ESKKIFEELNYQGTISWNALISGYAQNGLCKE 470



 Score =  131 bits (329), Expect = 2e-28
 Identities = 84/270 (31%), Positives = 135/270 (50%), Gaps = 12/270 (4%)
 Frame = -2

Query: 805 EFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSWNAILS 626
           EF +G Q+H  V+  G  +   + N+L+ MY K GR   A  +F  +   D VSWN ILS
Sbjct: 99  EFILGAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCVFEGLSCPDIVSWNTILS 158

Query: 625 GYAQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLD-----FGKQVHGLSL 461
           G+  E S        F+ +    +  D V+ T+ +S C      D     FG Q+H L +
Sbjct: 159 GF--EKSVDALNFACFMHL--NGVVFDPVTYTTALSFCWDRDYWDDHGFLFGLQLHSLVV 214

Query: 460 KRGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSINEE-------DA 302
           K G+G  V + N L++MY + G +++A  VF  +  R+++SW  MLS   +       +A
Sbjct: 215 KCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLSGYAQEGECYGLEA 274

Query: 301 VSLFKEMIRDEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANSFITM 122
           V LF  M+R+ +  + V+  G I        ++ G  +H    K  + + + V N  I+ 
Sbjct: 275 VLLFGNMVREGMLLDHVSLTGAISACGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLIST 334

Query: 121 YGKFKLVEDCVKVFEELDCRGIISWNALIS 32
           Y K K++ D   VF+++  R ++SW  LIS
Sbjct: 335 YSKCKVLRDAKAVFQDMSARNVVSWTTLIS 364



 Score =  108 bits (271), Expect = 1e-21
 Identities = 78/279 (27%), Positives = 133/279 (47%), Gaps = 7/279 (2%)
 Frame = -2

Query: 820  CADGEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSW 641
            C   +  + G Q+H L  KLG      + N LI+ YSKC  + DA  +F +M  ++ VSW
Sbjct: 300  CGYTKNLEFGKQIHGLAQKLGYGTHVAVCNVLISTYSKCKVLRDAKAVFQDMSARNVVSW 359

Query: 640  NAILSGYAQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSL 461
              ++S   +E    L     F  M    +  + V+   ++ A      +  G  VHGL L
Sbjct: 360  TTLIS-IDEENVVSL-----FNAMRVDGVYPNDVTFIGLLHAITIRNMVKEGLMVHGLCL 413

Query: 460  KRGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSINEE-----DAVS 296
            K    +   V N L++MY K   ++++  +FE +  +  ISW  ++S   +     +A  
Sbjct: 414  KSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQNGLCKEAFL 473

Query: 295  LFKEMIRDEICPNDVTFVGLIHTI--SKQGIMQEGLMVHAFCVKSNFLSEINVANSFITM 122
             F   I+ EI PN  TF  +++ I  ++   ++ G   H+  +K    ++  VA + + M
Sbjct: 474  TFLSAIK-EIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTDPFVAGALLDM 532

Query: 121  YGKFKLVEDCVKVFEELDCRGIISWNALISAYSLNGMYQ 5
            YGK   + +  +VF E   +   SW  +ISAY+ +G Y+
Sbjct: 533  YGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGDYE 571



 Score =  102 bits (254), Expect = 1e-19
 Identities = 70/269 (26%), Positives = 137/269 (50%), Gaps = 9/269 (3%)
 Frame = -2

Query: 793  GFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSWNAILSGYAQ 614
            G  +H L LK  L +E  + N+LITMY+K   + ++ ++F E+  +  +SWNA++SGYAQ
Sbjct: 405  GLMVHGLCLKSCLSSEQNVSNSLITMYAKFESIQESKKIFEELNYQGTISWNALISGYAQ 464

Query: 613  EGSYGLETILGFIEMAKGAMRLDHVSLTSVISA--CGQERNLDFGKQVHGLSLKRGYGNH 440
             G    E  L F+   K  ++ +  +  SV++A    ++ +L  G++ H   +K G    
Sbjct: 465  NGLCK-EAFLTFLSAIK-EIKPNQYTFGSVLNAIAAAEDISLKHGQRCHSHLIKLGLNTD 522

Query: 439  VTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSI-----NEEDAVSLFKEMIR 275
              V   L+ MY K G + ++  VF    ++   SWT M+S      + E  +SL+KE+ R
Sbjct: 523  PFVAGALLDMYGKRGNINESQRVFNETPEKTQFSWTGMISAYARHGDYESVMSLYKEIER 582

Query: 274  DEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANS-FITMYGKFKLVE 98
            +    + +TF+ ++    ++G++  G ++    VK + +       S  + M G+   ++
Sbjct: 583  EGSNLDSITFLSVLAACCRKGMVDVGHIIFDSMVKKHSIEPTPEHYSIMVDMLGRVGRLD 642

Query: 97   DCVKVFEEL-DCRGIISWNALISAYSLNG 14
            +  ++  ++    G+    +L+ +  L+G
Sbjct: 643  EAEELMHQIPGGPGLSVLQSLLGSCKLHG 671



 Score = 96.7 bits (239), Expect = 6e-18
 Identities = 60/186 (32%), Positives = 99/186 (53%), Gaps = 7/186 (3%)
 Frame = -2

Query: 550 LDHVSLTSVISACGQERNLDFGKQVHGLSLKRGYGNHVTVCNVLMSMYYKCGIVEDAHLV 371
           +D V+L     AC  E  L  G Q+HG  +  G+ + VTV N LM MY K G  E A  V
Sbjct: 84  IDEVTLALSFKACRGEFIL--GAQIHGFVVATGFVSRVTVSNSLMKMYCKAGRFELALCV 141

Query: 370 FENIFDRNVISWTTMLSINEE--DAVSLFKEMIRDEICPNDVTFVGLIHTISKQGIMQE- 200
           FE +   +++SW T+LS  E+  DA++    M  + +  + VT+   +     +    + 
Sbjct: 142 FEGLSCPDIVSWNTILSGFEKSVDALNFACFMHLNGVVFDPVTYTTALSFCWDRDYWDDH 201

Query: 199 ----GLMVHAFCVKSNFLSEINVANSFITMYGKFKLVEDCVKVFEELDCRGIISWNALIS 32
               GL +H+  VK  F  E+ + N+ +TMY ++  +++  +VF E+  R ++SWNA++S
Sbjct: 202 GFLFGLQLHSLVVKCGFGCEVFIGNALVTMYSRWGGLDEAGRVFNEMTIRDLVSWNAMLS 261

Query: 31  AYSLNG 14
            Y+  G
Sbjct: 262 GYAQEG 267


>ref|XP_002323929.1| predicted protein [Populus trichocarpa] gi|222866931|gb|EEF04062.1|
           predicted protein [Populus trichocarpa]
          Length = 770

 Score =  315 bits (806), Expect = 1e-83
 Identities = 149/267 (55%), Positives = 199/267 (74%)
 Frame = -2

Query: 802 FDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSWNAILSG 623
           F IG QLH  ++K G   E F+GNALI+MYS+ G +++A R+F EM+ +D VSWNA++SG
Sbjct: 180 FLIGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISG 239

Query: 622 YAQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSLKRGYGN 443
           Y+QEG YGLE I  F++M +G M LD +S TS +SACG E+NL+  +Q+HGLS+K  +  
Sbjct: 240 YSQEGIYGLEAISMFLQMFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEK 299

Query: 442 HVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSINEEDAVSLFKEMIRDEIC 263
           HV V NVL+S Y+KC ++EDA LVF+N+ +RNV+SWTTM+SI+E +AVS F EM  D + 
Sbjct: 300 HVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSWTTMISIDEAEAVSFFNEMRLDGVY 359

Query: 262 PNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANSFITMYGKFKLVEDCVKV 83
           PNDVTFVGLIH I+   ++ +G MVH FC K+ F S+ NV NS ITMY KFK ++D VKV
Sbjct: 360 PNDVTFVGLIHAITIGELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKV 419

Query: 82  FEELDCRGIISWNALISAYSLNGMYQE 2
           F+EL  + II+WNALIS +  NG+ QE
Sbjct: 420 FQELKYQDIIAWNALISGFVHNGLCQE 446



 Score =  116 bits (291), Expect = 5e-24
 Identities = 73/264 (27%), Positives = 131/264 (49%), Gaps = 9/264 (3%)
 Frame = -2

Query: 796 IGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSWNAILSG-Y 620
           +G Q+H   +         + N+L+ MY K G+   A  +F  + + D VSWN +LSG  
Sbjct: 82  LGSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCIFENLTHPDIVSWNTVLSGCQ 141

Query: 619 AQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDF--GKQVHGLSLKRGYG 446
             E ++         +M    +  D V+ T+V+S C +     F  G Q+H   +K G+ 
Sbjct: 142 TSEDAFSFA-----CKMNSSGVVFDAVTYTTVLSFCWRHVEAYFLIGLQLHSCIVKFGFD 196

Query: 445 NHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLS------INEEDAVSLFKE 284
             V V N L+SMY + G + +A  VFE +  R+++SW  M+S      I   +A+S+F +
Sbjct: 197 CEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYSQEGIYGLEAISMFLQ 256

Query: 283 MIRDEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVKSNFLSEINVANSFITMYGKFKL 104
           M R  +  + ++F   +     +  ++    +H   +K+     + V+N  I+ Y K ++
Sbjct: 257 MFRGGMELDRISFTSAVSACGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQV 316

Query: 103 VEDCVKVFEELDCRGIISWNALIS 32
           +ED   VF+ ++ R ++SW  +IS
Sbjct: 317 IEDARLVFQNMNERNVVSWTTMIS 340



 Score =  103 bits (256), Expect = 6e-20
 Identities = 71/280 (25%), Positives = 136/280 (48%), Gaps = 8/280 (2%)
 Frame = -2

Query: 820  CADGEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSW 641
            C   +  ++  Q+H L +K   +    + N LI+ Y KC  + DA  +F  M  ++ VSW
Sbjct: 276  CGYEKNLELARQIHGLSIKTRHEKHVAVSNVLISTYFKCQVIEDARLVFQNMNERNVVSW 335

Query: 640  NAILSGYAQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSL 461
              ++S    E     E +  F EM    +  + V+   +I A      +  GK VHG   
Sbjct: 336  TTMIS--IDEA----EAVSFFNEMRLDGVYPNDVTFVGLIHAITIGELVVQGKMVHGFCT 389

Query: 460  KRGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLS------INEEDAV 299
            K G+ +   VCN +++MY K   ++D+  VF+ +  +++I+W  ++S      + +E   
Sbjct: 390  KTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNALISGFVHNGLCQEAIR 449

Query: 298  SLFKEMIRDEICPNDVTFVGLIHTI--SKQGIMQEGLMVHAFCVKSNFLSEINVANSFIT 125
            + F  +I  +  PN  +F  +++ I  ++   ++ G   H+  +K    ++  V+++ + 
Sbjct: 450  AFFSGLIESK--PNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLD 507

Query: 124  MYGKFKLVEDCVKVFEELDCRGIISWNALISAYSLNGMYQ 5
            MY K   + +  KVF E   +   +W  +ISAY+ +G Y+
Sbjct: 508  MYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYE 547



 Score = 99.0 bits (245), Expect = 1e-18
 Identities = 61/185 (32%), Positives = 99/185 (53%), Gaps = 4/185 (2%)
 Frame = -2

Query: 550 LDHVSLTSVISACGQERNLDFGKQVHGLSLKRGYGNHVTVCNVLMSMYYKCGIVEDAHLV 371
           +D  ++ + + AC     L  G Q+HG S+   + N   V N LM+MY K G    A  +
Sbjct: 64  IDEFTVANALKACRGYPLL--GSQIHGFSIIHEFVNVTIVSNSLMNMYCKSGQFCKALCI 121

Query: 370 FENIFDRNVISWTTMLS--INEEDAVSLFKEMIRDEICPNDVTFVGLIHTISK--QGIMQ 203
           FEN+   +++SW T+LS     EDA S   +M    +  + VT+  ++    +  +    
Sbjct: 122 FENLTHPDIVSWNTVLSGCQTSEDAFSFACKMNSSGVVFDAVTYTTVLSFCWRHVEAYFL 181

Query: 202 EGLMVHAFCVKSNFLSEINVANSFITMYGKFKLVEDCVKVFEELDCRGIISWNALISAYS 23
            GL +H+  VK  F  E+ V N+ I+MY ++  + +  +VFEE+  R ++SWNA+IS YS
Sbjct: 182 IGLQLHSCIVKFGFDCEVFVGNALISMYSRWGHLVEARRVFEEMKTRDLVSWNAMISGYS 241

Query: 22  LNGMY 8
             G+Y
Sbjct: 242 QEGIY 246



 Score = 96.3 bits (238), Expect = 7e-18
 Identities = 59/221 (26%), Positives = 116/221 (52%), Gaps = 7/221 (3%)
 Frame = -2

Query: 811  GEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSWNAI 632
            GE    G  +H    K G  +++ + N++ITMY+K   + D+ ++F E++ +D ++WNA+
Sbjct: 375  GELVVQGKMVHGFCTKTGFSSKSNVCNSIITMYAKFKSMQDSVKVFQELKYQDIIAWNAL 434

Query: 631  LSGYAQEGSYGLETILGFIEMAKGAMRLDHVSLTSVISACG--QERNLDFGKQVHGLSLK 458
            +SG+   G    E I  F        + +  S  S+++A G  ++ +L +G++ H   +K
Sbjct: 435  ISGFVHNG-LCQEAIRAFFS-GLIESKPNQYSFGSILNAIGAAEDVSLKYGQRCHSQIIK 492

Query: 457  RGYGNHVTVCNVLMSMYYKCGIVEDAHLVFENIFDRNVISWTTMLSI-----NEEDAVSL 293
             G      V + L+ MY K G + ++  VF     ++  +WTT++S      + E  ++ 
Sbjct: 493  LGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWTTIISAYARHGDYESVMNW 552

Query: 292  FKEMIRDEICPNDVTFVGLIHTISKQGIMQEGLMVHAFCVK 170
            F+EM R E+ P+ +TF+ ++    ++G++  G  +    VK
Sbjct: 553  FEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFGSMVK 593



 Score = 72.4 bits (176), Expect = 1e-10
 Identities = 43/156 (27%), Positives = 84/156 (53%), Gaps = 3/156 (1%)
 Frame = -2

Query: 817 ADGEEFDIGFQLHCLVLKLGLKAENFIGNALITMYSKCGRVMDAGRLFNEMQNKDFVSWN 638
           A+      G + H  ++KLGL  +  + +AL+ MY+K G + ++ ++F E   +   +W 
Sbjct: 475 AEDVSLKYGQRCHSQIIKLGLNTDPIVSSALLDMYAKRGSICESQKVFVETPQQSQFAWT 534

Query: 637 AILSGYAQEGSYGLETILG-FIEMAKGAMRLDHVSLTSVISACGQERNLDFGKQVHGLSL 461
            I+S YA+ G Y  E+++  F EM +  +R D ++  S+++ACG+   +D G  + G S+
Sbjct: 535 TIISAYARHGDY--ESVMNWFEEMRRLEVRPDSITFLSILTACGRRGMVDMGCHLFG-SM 591

Query: 460 KRGYGNHVTV--CNVLMSMYYKCGIVEDAHLVFENI 359
            + Y    +    + L+ M  + G +E+A  +  +I
Sbjct: 592 VKDYQIEPSAEHYSCLVDMLGRAGRLEEAERLMSHI 627