BLASTX nr result

ID: Scutellaria22_contig00013916 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00013916
         (409 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containi...   182   3e-44
emb|CBI21323.3| unnamed protein product [Vitis vinifera]              176   2e-42
ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containi...   172   3e-41
ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40

>ref|XP_004158532.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 640

 Score =  182 bits (461), Expect = 3e-44
 Identities = 87/135 (64%), Positives = 106/135 (78%)
 Frame = +1

Query: 1   LEEMKKIGLSPDVSTYNSLLKACCREDLVRPAKRLWDEMFACGCCGNLESYNILITKFSE 180
           L+EMKK G  PDVS YNS+L+ACCREDL+RPA++LWDEMFA GCCGNL++Y+ILI KFS+
Sbjct: 421 LQEMKKNGFDPDVSFYNSVLEACCREDLLRPARKLWDEMFAGGCCGNLKTYSILIQKFSK 480

Query: 181 LGQVEDACHLFHQMLGKGLEPDESTYKSLLQGLCQAKNLELALEVFNMSVKQDVKLGNTL 360
             Q+E+A  L+  MLGK +EPD + Y SLLQGLCQ   LE A EVF+ SV+QDV L  TL
Sbjct: 481 SNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDSQLEAAFEVFSKSVEQDVNLAATL 540

Query: 361 LTKFVHCLCKEGFFL 405
           L+ F+ CLCK G FL
Sbjct: 541 LSTFILCLCKVGHFL 555


>emb|CBI21323.3| unnamed protein product [Vitis vinifera]
          Length = 676

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/135 (62%), Positives = 104/135 (77%)
 Frame = +1

Query: 1   LEEMKKIGLSPDVSTYNSLLKACCREDLVRPAKRLWDEMFACGCCGNLESYNILITKFSE 180
           L+EMKK GL PD+S+YN L++ACCREDL+RPAKRLWDEMFA G   NL++YNILI KFSE
Sbjct: 421 LQEMKKNGLDPDISSYNCLMEACCREDLLRPAKRLWDEMFASGYGVNLKTYNILIQKFSE 480

Query: 181 LGQVEDACHLFHQMLGKGLEPDESTYKSLLQGLCQAKNLELALEVFNMSVKQDVKLGNTL 360
           +GQ+++A  LF  ML KG+ PD +TY SLL+GLCQ K  E A EVF  SV+QDV L  T+
Sbjct: 481 IGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGLCQEKKFESAFEVFKKSVEQDVMLAQTI 540

Query: 361 LTKFVHCLCKEGFFL 405
           L  F+  +CKEG FL
Sbjct: 541 LNTFILYICKEGNFL 555


>ref|XP_002274670.1| PREDICTED: pentatricopeptide repeat-containing protein At5g14080
           [Vitis vinifera]
          Length = 660

 Score =  176 bits (446), Expect = 2e-42
 Identities = 85/135 (62%), Positives = 104/135 (77%)
 Frame = +1

Query: 1   LEEMKKIGLSPDVSTYNSLLKACCREDLVRPAKRLWDEMFACGCCGNLESYNILITKFSE 180
           L+EMKK GL PD+S+YN L++ACCREDL+RPAKRLWDEMFA G   NL++YNILI KFSE
Sbjct: 421 LQEMKKNGLDPDISSYNCLMEACCREDLLRPAKRLWDEMFASGYGVNLKTYNILIQKFSE 480

Query: 181 LGQVEDACHLFHQMLGKGLEPDESTYKSLLQGLCQAKNLELALEVFNMSVKQDVKLGNTL 360
           +GQ+++A  LF  ML KG+ PD +TY SLL+GLCQ K  E A EVF  SV+QDV L  T+
Sbjct: 481 IGQIQEAQWLFQHMLEKGVNPDATTYTSLLEGLCQEKKFESAFEVFKKSVEQDVMLAQTI 540

Query: 361 LTKFVHCLCKEGFFL 405
           L  F+  +CKEG FL
Sbjct: 541 LNTFILYICKEGNFL 555


>ref|XP_003549091.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Glycine max]
          Length = 647

 Score =  172 bits (435), Expect = 3e-41
 Identities = 76/135 (56%), Positives = 106/135 (78%)
 Frame = +1

Query: 1   LEEMKKIGLSPDVSTYNSLLKACCREDLVRPAKRLWDEMFACGCCGNLESYNILITKFSE 180
           L+EMKK G  P+V++YN +++ACC+EDL+RPA++LWDEMF+ GCCGNL++YNILI KFSE
Sbjct: 417 LQEMKKKGFRPNVTSYNYIMEACCKEDLLRPARKLWDEMFSSGCCGNLKTYNILIQKFSE 476

Query: 181 LGQVEDACHLFHQMLGKGLEPDESTYKSLLQGLCQAKNLELALEVFNMSVKQDVKLGNTL 360
           +GQ E+A  LF+ ML KG+EPD ++Y  LL+GLCQ   LE A E++N SVKQD+ L   +
Sbjct: 477 VGQAEEAHMLFYHMLDKGVEPDVTSYTLLLEGLCQEDKLEAAFELYNKSVKQDIILARDI 536

Query: 361 LTKFVHCLCKEGFFL 405
           L+ F+  LC++G  +
Sbjct: 537 LSSFISSLCRKGHLM 551


>ref|XP_004138797.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g14080-like [Cucumis sativus]
          Length = 635

 Score =  170 bits (430), Expect = 1e-40
 Identities = 81/127 (63%), Positives = 100/127 (78%)
 Frame = +1

Query: 1   LEEMKKIGLSPDVSTYNSLLKACCREDLVRPAKRLWDEMFACGCCGNLESYNILITKFSE 180
           L+EMKK G  PDVS YNS+L+ACCREDL+RPA++LWDEMFA GCCGNL++Y+ILI KFS+
Sbjct: 421 LQEMKKNGFDPDVSFYNSVLEACCREDLLRPARKLWDEMFAGGCCGNLKTYSILIQKFSK 480

Query: 181 LGQVEDACHLFHQMLGKGLEPDESTYKSLLQGLCQAKNLELALEVFNMSVKQDVKLGNTL 360
             Q+E+A  L+  MLGK +EPD + Y SLLQGLCQ   LE A EVF+ SV+QDV L  TL
Sbjct: 481 SNQIEEALVLYSHMLGKNVEPDIAIYTSLLQGLCQDSQLEAAFEVFSKSVEQDVNLAATL 540

Query: 361 LTKFVHC 381
           L+ F+ C
Sbjct: 541 LSTFILC 547


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