BLASTX nr result

ID: Scutellaria22_contig00013818 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00013818
         (624 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK95213.1| unknown [Populus trichocarpa]                          263   2e-68
ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|2...   257   1e-66
ref|XP_003543240.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   254   1e-65
ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   252   4e-65
ref|XP_003540466.1| PREDICTED: 50S ribosomal protein L3-2, chlor...   251   6e-65

>gb|ABK95213.1| unknown [Populus trichocarpa]
          Length = 315

 Score =  263 bits (672), Expect = 2e-68
 Identities = 136/187 (72%), Positives = 148/187 (79%), Gaps = 8/187 (4%)
 Frame = -3

Query: 538 MSAASRVLVSRLRQVLFVGPRSLNTGH-----LRTLSAVAEHDDDSMSFH---RIIEAKP 383
           MSA SR L+SRL ++L    R+  T       LR  SA A  D   + +H   RIIEAKP
Sbjct: 1   MSALSRGLISRLYRILSANSRTPPTATTKFYLLRCFSADALIDGSQVEYHQQSRIIEAKP 60

Query: 382 GVMTHNSKRTGTIAVKCGMTALWDKWGARVPITILWMDDNIVSQVKTPENEGLCALQVGC 203
           GVMT NSKRTG +AVKCGMTALWDKWGAR+PIT+LW+DDNIVSQVKT E EG  ALQVGC
Sbjct: 61  GVMTPNSKRTGVVAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFALQVGC 120

Query: 202 GQKKEKHLRKPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTSIGVRHFVAGQYVDVTGI 23
           GQKKEKHL KPEVGHFRAQGVPMKRKLREFPVTEDALLPVGT +GVRHFV GQ+VDV GI
Sbjct: 121 GQKKEKHLTKPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTYVGVRHFVPGQFVDVAGI 180

Query: 22  TKGKGFQ 2
           T GKGFQ
Sbjct: 181 TMGKGFQ 187


>ref|XP_002315468.1| predicted protein [Populus trichocarpa] gi|222864508|gb|EEF01639.1|
           predicted protein [Populus trichocarpa]
          Length = 320

 Score =  257 bits (657), Expect = 1e-66
 Identities = 134/192 (69%), Positives = 147/192 (76%), Gaps = 13/192 (6%)
 Frame = -3

Query: 538 MSAASRVLVSRLRQVLFVGPRSLNTGH----------LRTLSAVAEHDDDSMSFH---RI 398
           M A SR L+SRL Q+L +  R+  +            LR  S+ A  D   + +    RI
Sbjct: 1   MPALSRGLISRLHQILSLNSRTTQSASPPIATTQLYLLRRFSSDALVDGSEIQYQQPSRI 60

Query: 397 IEAKPGVMTHNSKRTGTIAVKCGMTALWDKWGARVPITILWMDDNIVSQVKTPENEGLCA 218
           IEAKPGVMT NSKRTG IAVKCGMTALWDKWGAR+PIT+LW+DDNIVSQVKT E EG  A
Sbjct: 61  IEAKPGVMTPNSKRTGVIAVKCGMTALWDKWGARIPITVLWVDDNIVSQVKTVEKEGFFA 120

Query: 217 LQVGCGQKKEKHLRKPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTSIGVRHFVAGQYV 38
           LQVGCGQKKEKHL KPEVGHFRAQGVPMKRKLREFPVTE+ALLPVGT IGVRHFV GQ+V
Sbjct: 121 LQVGCGQKKEKHLTKPEVGHFRAQGVPMKRKLREFPVTENALLPVGTCIGVRHFVPGQFV 180

Query: 37  DVTGITKGKGFQ 2
           DV GIT GKGFQ
Sbjct: 181 DVAGITMGKGFQ 192


>ref|XP_003543240.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like [Glycine
           max]
          Length = 300

 Score =  254 bits (648), Expect = 1e-65
 Identities = 130/179 (72%), Positives = 144/179 (80%)
 Frame = -3

Query: 538 MSAASRVLVSRLRQVLFVGPRSLNTGHLRTLSAVAEHDDDSMSFHRIIEAKPGVMTHNSK 359
           M A SR LVSRL++       S     LR+LS+     D +    RIIE KP VMT NSK
Sbjct: 1   MLALSRGLVSRLQRFAVDSSPS----PLRSLSS-----DAAAIQTRIIEPKPSVMTPNSK 51

Query: 358 RTGTIAVKCGMTALWDKWGARVPITILWMDDNIVSQVKTPENEGLCALQVGCGQKKEKHL 179
           RTG IAVKCGM+ALWDKWGAR+PIT+LW+DDNIVSQVKTPE EG CALQ+GCG KK+KHL
Sbjct: 52  RTGLIAVKCGMSALWDKWGARIPITVLWVDDNIVSQVKTPEKEGFCALQIGCGHKKDKHL 111

Query: 178 RKPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTSIGVRHFVAGQYVDVTGITKGKGFQ 2
            KPEVGHFRAQGVPMKRKL+EFPVTEDALLPVGTS+ VRHFV GQYVD+TGITKGKGFQ
Sbjct: 112 TKPEVGHFRAQGVPMKRKLKEFPVTEDALLPVGTSLNVRHFVPGQYVDITGITKGKGFQ 170


>ref|XP_002268657.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic [Vitis
           vinifera] gi|297736812|emb|CBI26013.3| unnamed protein
           product [Vitis vinifera]
          Length = 307

 Score =  252 bits (643), Expect = 4e-65
 Identities = 132/182 (72%), Positives = 148/182 (81%), Gaps = 3/182 (1%)
 Frame = -3

Query: 538 MSAASRVLVSRLRQVLFVGPRS---LNTGHLRTLSAVAEHDDDSMSFHRIIEAKPGVMTH 368
           MSAASR L+S  R  L +GPR+   + +   R   + +  D++     RII  KPGVM+ 
Sbjct: 1   MSAASRGLISGFR-FLSIGPRTSAIVASYQFRRFGSESLIDEEP----RIIVPKPGVMSP 55

Query: 367 NSKRTGTIAVKCGMTALWDKWGARVPITILWMDDNIVSQVKTPENEGLCALQVGCGQKKE 188
           NSKRTG IAVKCGM+ALWDKWGARVPIT+LW+DDNIVSQVKT E EGL ALQVGCGQKK 
Sbjct: 56  NSKRTGAIAVKCGMSALWDKWGARVPITVLWLDDNIVSQVKTFEKEGLNALQVGCGQKKA 115

Query: 187 KHLRKPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTSIGVRHFVAGQYVDVTGITKGKG 8
           KHL KPEVGHFRAQGVP+KRKLREFPVTEDALLPVGT+IGVRHFV GQYVDVTGIT+GKG
Sbjct: 116 KHLTKPEVGHFRAQGVPLKRKLREFPVTEDALLPVGTTIGVRHFVPGQYVDVTGITRGKG 175

Query: 7   FQ 2
           FQ
Sbjct: 176 FQ 177


>ref|XP_003540466.1| PREDICTED: 50S ribosomal protein L3-2, chloroplastic-like [Glycine
           max]
          Length = 299

 Score =  251 bits (642), Expect = 6e-65
 Identities = 128/179 (71%), Positives = 143/179 (79%)
 Frame = -3

Query: 538 MSAASRVLVSRLRQVLFVGPRSLNTGHLRTLSAVAEHDDDSMSFHRIIEAKPGVMTHNSK 359
           M A SR LVSRL++V      SL     R LS+     D +    RIIE KP  MT NSK
Sbjct: 1   MLALSRGLVSRLQRVAVDSQLSL-----RFLSS-----DAAAIRSRIIEPKPSAMTPNSK 50

Query: 358 RTGTIAVKCGMTALWDKWGARVPITILWMDDNIVSQVKTPENEGLCALQVGCGQKKEKHL 179
           RTG IAVKCGM+ALWDKWGAR+PIT+LW+DDNIVSQ+KTPE EG CALQ+GCG KK+KHL
Sbjct: 51  RTGLIAVKCGMSALWDKWGARIPITVLWVDDNIVSQIKTPEKEGFCALQIGCGHKKDKHL 110

Query: 178 RKPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTSIGVRHFVAGQYVDVTGITKGKGFQ 2
            KPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTS+ VRHFV GQ+VD++GITKGKGFQ
Sbjct: 111 TKPEVGHFRAQGVPMKRKLREFPVTEDALLPVGTSLNVRHFVPGQFVDISGITKGKGFQ 169


Top