BLASTX nr result

ID: Scutellaria22_contig00010550 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00010550
         (680 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum] gi...   262   5e-68
gb|AFK33567.1| unknown [Lotus japonicus]                              250   2e-64
ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinife...   248   6e-64
ref|XP_002513076.1| conserved hypothetical protein [Ricinus comm...   240   2e-61
ref|XP_003598631.1| F-box protein SKIP5 [Medicago truncatula] gi...   238   1e-60

>ref|NP_001234135.1| SKIP5-like protein [Solanum lycopersicum]
           gi|15777895|gb|AAL05932.1| SKIP5-like protein [Solanum
           lycopersicum]
          Length = 265

 Score =  262 bits (669), Expect = 5e-68
 Identities = 128/162 (79%), Positives = 144/162 (88%), Gaps = 3/162 (1%)
 Frame = +1

Query: 1   RPGDTILIAAGGIHHTSNIQIKKPLCLIGAGELPDDTTLICSRGSESALEFLSTCKLANL 180
           RPGDTILIAAGG HH SNIQI+KPLCLIGAGE PDDTTLICSRGS+SALEF+STCKLANL
Sbjct: 89  RPGDTILIAAGGSHHVSNIQIEKPLCLIGAGESPDDTTLICSRGSDSALEFMSTCKLANL 148

Query: 181 TVRAELGCCLLHRSGRLTIDGCILQCESDPLDHLSHAIVTTASE---IPPIIKNSGDRVT 351
           TVR ELGCCLLHRSG+LT+DGCILQCES+PLDHLS+AI++TA     IP  +K   D V+
Sbjct: 149 TVRTELGCCLLHRSGKLTVDGCILQCESNPLDHLSYAIISTAGAAEVIPSALKTCSDAVS 208

Query: 352 VMQTRIEGGAKAVLTSGTLSLQKVRVIYTRTSLFFWFNIEHS 477
           V++T+I GGAKAVLTSGTLSLQ+VRVIYTRTSLFFWF +E S
Sbjct: 209 VLKTQIAGGAKAVLTSGTLSLQRVRVIYTRTSLFFWFEVEGS 250


>gb|AFK33567.1| unknown [Lotus japonicus]
          Length = 268

 Score =  250 bits (638), Expect = 2e-64
 Identities = 129/162 (79%), Positives = 140/162 (86%), Gaps = 5/162 (3%)
 Frame = +1

Query: 1   RPGDTILIAAGGIHHTSNIQIKKPLCLIGAGELPDDTTLICSRGSESALEFLSTCKLANL 180
           RPGDTILIAAGG HHTSNIQIKKPLCLIGAGELPDDTTLICSRGS+SALE LSTCKLANL
Sbjct: 105 RPGDTILIAAGGSHHTSNIQIKKPLCLIGAGELPDDTTLICSRGSDSALELLSTCKLANL 164

Query: 181 TVRAELGCCLLHRSGRLTIDGCILQCESDPLDHLSHAIVTTA--SEIPPIIKNS---GDR 345
           TV+AELGCCLLHR GRLT+DGCILQCES+PLD LS  IV+TA  SE+ P    S   GD 
Sbjct: 165 TVKAELGCCLLHRKGRLTVDGCILQCESNPLDFLSCPIVSTANSSEVLPSQTKSNGGGDG 224

Query: 346 VTVMQTRIEGGAKAVLTSGTLSLQKVRVIYTRTSLFFWFNIE 471
           V V QTRIEGGAKAV+TSG L+LQ+VRVIY RTSL FWF++E
Sbjct: 225 VFVSQTRIEGGAKAVVTSGDLALQRVRVIYARTSLLFWFDVE 266


>ref|XP_002269519.1| PREDICTED: F-box protein SKIP5 [Vitis vinifera]
           gi|297742690|emb|CBI35143.3| unnamed protein product
           [Vitis vinifera]
          Length = 254

 Score =  248 bits (634), Expect = 6e-64
 Identities = 122/160 (76%), Positives = 143/160 (89%), Gaps = 3/160 (1%)
 Frame = +1

Query: 1   RPGDTILIAAGGIHHTSNIQIKKPLCLIGAGELPDDTTLICSRGSESALEFLSTCKLANL 180
           RPGDTILIAAGG H  SNIQIKKPLCLIG GELPDDTTL+CSRGS+SALEFLSTCK+ANL
Sbjct: 93  RPGDTILIAAGGSHLASNIQIKKPLCLIGGGELPDDTTLLCSRGSDSALEFLSTCKVANL 152

Query: 181 TVRAELGCCLLHRSGRLTIDGCILQCESDPLDHLSHAIVTTASE---IPPIIKNSGDRVT 351
           TV+AELGCCLLHRSGRLTIDGCILQCES+PLD+LS  IV+TA+    +   +K+ GD V+
Sbjct: 153 TVKAELGCCLLHRSGRLTIDGCILQCESNPLDYLSCPIVSTAAGPEILTSSVKSHGDSVS 212

Query: 352 VMQTRIEGGAKAVLTSGTLSLQKVRVIYTRTSLFFWFNIE 471
           V +TRIEGGAKAV+TSG+L+LQ+VRVIY RTS+FFWF+++
Sbjct: 213 VSRTRIEGGAKAVVTSGSLALQRVRVIYARTSIFFWFDVD 252


>ref|XP_002513076.1| conserved hypothetical protein [Ricinus communis]
           gi|223548087|gb|EEF49579.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 250

 Score =  240 bits (612), Expect = 2e-61
 Identities = 118/161 (73%), Positives = 138/161 (85%), Gaps = 3/161 (1%)
 Frame = +1

Query: 1   RPGDTILIAAGGIHHTSNIQIKKPLCLIGAGELPDDTTLICSRGSESALEFLSTCKLANL 180
           RPGDTILI+AGG H  SNIQI KPLCLIG GELPD+T L+CSRGS+SALEFLSTCKLANL
Sbjct: 89  RPGDTILISAGGSHLASNIQINKPLCLIGGGELPDETMLLCSRGSDSALEFLSTCKLANL 148

Query: 181 TVRAELGCCLLHRSGRLTIDGCILQCESDPLDHLSHAIVTTASE---IPPIIKNSGDRVT 351
           TV+AELGCCLLHRSG+LTID C+LQCESDPLD+LS  IV+TA +   +   +K +GD VT
Sbjct: 149 TVKAELGCCLLHRSGKLTIDSCVLQCESDPLDYLSCPIVSTAGKHEVLSAPMKTNGDSVT 208

Query: 352 VMQTRIEGGAKAVLTSGTLSLQKVRVIYTRTSLFFWFNIEH 474
           V QTRIEGGAKAVLT+G L LQ+VRVIY+RT ++FWF++ H
Sbjct: 209 VSQTRIEGGAKAVLTNGDLVLQRVRVIYSRTYVYFWFDVGH 249


>ref|XP_003598631.1| F-box protein SKIP5 [Medicago truncatula]
           gi|355487679|gb|AES68882.1| F-box protein SKIP5
           [Medicago truncatula]
          Length = 260

 Score =  238 bits (606), Expect = 1e-60
 Identities = 120/161 (74%), Positives = 136/161 (84%), Gaps = 4/161 (2%)
 Frame = +1

Query: 1   RPGDTILIAAGGIHHTSNIQIKKPLCLIGAGELPDDTTLICSRGSESALEFLSTCKLANL 180
           RPGDTILIAAGGIH  +NIQI KPLCLIGAGE+PDDT L CSRG +SA EFLS CKL+NL
Sbjct: 98  RPGDTILIAAGGIHRVANIQINKPLCLIGAGEIPDDTMLTCSRGLDSAFEFLSNCKLSNL 157

Query: 181 TVRAELGCCLLHRSGRLTIDGCILQCESDPLDHLSHAIVTTA--SEIPPIIKNS--GDRV 348
           TV+AELGCCLLHRSGRLTIDGC+LQCES+PLD LS  I++TA  S++ P   NS  GD V
Sbjct: 158 TVKAELGCCLLHRSGRLTIDGCVLQCESNPLDFLSCPIISTANSSDMVPSQTNSNNGDGV 217

Query: 349 TVMQTRIEGGAKAVLTSGTLSLQKVRVIYTRTSLFFWFNIE 471
            V QTRIEGGAKAVLTSG L+LQ+VRV+Y RTSL FWF++E
Sbjct: 218 FVSQTRIEGGAKAVLTSGDLALQRVRVVYARTSLLFWFDVE 258


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