BLASTX nr result

ID: Scutellaria22_contig00010497 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00010497
         (726 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein ...   167   2e-39
dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris] gi|29...   162   5e-38
gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undul...   161   1e-37
dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]                          161   1e-37
gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumb...   160   2e-37

>ref|XP_002264895.1| PREDICTED: glycine-rich RNA-binding protein 2, mitochondrial [Vitis
           vinifera] gi|147833478|emb|CAN75185.1| hypothetical
           protein VITISV_001912 [Vitis vinifera]
           gi|298205231|emb|CBI17290.3| unnamed protein product
           [Vitis vinifera]
          Length = 152

 Score =  167 bits (424), Expect = 2e-39
 Identities = 86/123 (69%), Positives = 103/123 (83%), Gaps = 4/123 (3%)
 Frame = -2

Query: 725 FYNKVGTMLRQSISANTSLSGQSSM---FNAVRCMTT-KLFVGGLSFGTDDQSLKDAFSS 558
           F N+ G +LRQSIS N++  GQ SM    N++RCM++ KLF+GGLS+GTDDQSLKDAFSS
Sbjct: 3   FCNRFGNLLRQSISQNSASKGQGSMGALLNSIRCMSSAKLFIGGLSYGTDDQSLKDAFSS 62

Query: 557 FGEVEFARVITDRETGRSKGFGFVNFQTEECATSALSAMDGQELNGRNIRVSYAQERERA 378
           FG+V  ARVITDR+TGRS+GFGFVNF +++ A+SALSAMDGQELNGRNIRVSYA ER   
Sbjct: 63  FGDVVEARVITDRDTGRSRGFGFVNFTSDDSASSALSAMDGQELNGRNIRVSYANERTPG 122

Query: 377 PRS 369
           PRS
Sbjct: 123 PRS 125


>dbj|BAA22083.1| RNA binding protein [Nicotiana sylvestris]
           gi|295393569|gb|ADG03640.1| RNA-binding glycine-rich
           protein [Nicotiana tabacum] gi|399931789|gb|AFP57444.1|
           RNA-binding glycine-rich protein [Nicotiana tabacum]
           gi|399931793|gb|AFP57446.1| RNA-binding glycine-rich
           protein [Nicotiana acuminata]
           gi|399931795|gb|AFP57447.1| RNA-binding glycine-rich
           protein [Nicotiana alata] gi|399931809|gb|AFP57454.1|
           RNA-binding glycine-rich protein [Nicotiana sylvestris]
          Length = 144

 Score =  162 bits (411), Expect = 5e-38
 Identities = 84/121 (69%), Positives = 100/121 (82%), Gaps = 2/121 (1%)
 Frame = -2

Query: 725 FYNKVGTMLRQSISAN--TSLSGQSSMFNAVRCMTTKLFVGGLSFGTDDQSLKDAFSSFG 552
           FYNK+G +LRQSIS N  ++ S   SM +AVRCM+TKLFVGGLS+GTDDQSL+DAF++FG
Sbjct: 3   FYNKLGGLLRQSISGNAVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFG 62

Query: 551 EVEFARVITDRETGRSKGFGFVNFQTEECATSALSAMDGQELNGRNIRVSYAQERERAPR 372
           +V  ARVI DR++GRS+GFGFVNF  +ECA  A+ AMDGQEL GRNIRVS AQ  ERAPR
Sbjct: 63  DVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQ--ERAPR 120

Query: 371 S 369
           S
Sbjct: 121 S 121


>gb|AFP57455.1| RNA-binding glycine-rich protein [Nicotiana undulata]
          Length = 144

 Score =  161 bits (407), Expect = 1e-37
 Identities = 84/121 (69%), Positives = 100/121 (82%), Gaps = 2/121 (1%)
 Frame = -2

Query: 725 FYNKVGTMLRQSISAN--TSLSGQSSMFNAVRCMTTKLFVGGLSFGTDDQSLKDAFSSFG 552
           FYNK+G +LRQSIS N  ++ S   SMF+AVRCM+TKLFVGGLS+GTDDQSL+DAF++FG
Sbjct: 3   FYNKLGGLLRQSISGNAVSATSPMPSMFDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFG 62

Query: 551 EVEFARVITDRETGRSKGFGFVNFQTEECATSALSAMDGQELNGRNIRVSYAQERERAPR 372
           +V  ARVI DR++GRS+GFGFVNF  +E A  A+ AMDGQEL GRNIRVS AQ  ERAPR
Sbjct: 63  DVVDARVIVDRDSGRSRGFGFVNFSDDESANEAIKAMDGQELQGRNIRVSIAQ--ERAPR 120

Query: 371 S 369
           S
Sbjct: 121 S 121


>dbj|BAA11089.1| RGP-3 [Nicotiana sylvestris]
          Length = 144

 Score =  161 bits (407), Expect = 1e-37
 Identities = 83/121 (68%), Positives = 99/121 (81%), Gaps = 2/121 (1%)
 Frame = -2

Query: 725 FYNKVGTMLRQSISAN--TSLSGQSSMFNAVRCMTTKLFVGGLSFGTDDQSLKDAFSSFG 552
           FYNK+G +LRQSIS N  ++ S   SM +AVRCM+TKLFVGGLS+GTDDQSL+DAF++FG
Sbjct: 3   FYNKLGGLLRQSISGNAVSATSPMKSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFG 62

Query: 551 EVEFARVITDRETGRSKGFGFVNFQTEECATSALSAMDGQELNGRNIRVSYAQERERAPR 372
           +V  ARVI DR++GRS+GFGFVNF  +ECA  A+ AMDGQEL GRNIRV  AQ  ERAPR
Sbjct: 63  DVVDARVIVDRDSGRSRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVRIAQ--ERAPR 120

Query: 371 S 369
           S
Sbjct: 121 S 121


>gb|AFP57451.1| RNA-binding glycine-rich protein [Nicotiana plumbaginifolia]
          Length = 144

 Score =  160 bits (406), Expect = 2e-37
 Identities = 83/121 (68%), Positives = 99/121 (81%), Gaps = 2/121 (1%)
 Frame = -2

Query: 725 FYNKVGTMLRQSISAN--TSLSGQSSMFNAVRCMTTKLFVGGLSFGTDDQSLKDAFSSFG 552
           FYNK+G +LRQSIS N  ++ S   SM +AVRCM+TKLFVGGLS+GTDDQSL+DAF++FG
Sbjct: 3   FYNKLGGLLRQSISGNAVSATSPMPSMLDAVRCMSTKLFVGGLSWGTDDQSLRDAFATFG 62

Query: 551 EVEFARVITDRETGRSKGFGFVNFQTEECATSALSAMDGQELNGRNIRVSYAQERERAPR 372
           +V  ARVI DR++GR +GFGFVNF  +ECA  A+ AMDGQEL GRNIRVS AQ  ERAPR
Sbjct: 63  DVVDARVIVDRDSGRPRGFGFVNFSDDECANEAIKAMDGQELQGRNIRVSIAQ--ERAPR 120

Query: 371 S 369
           S
Sbjct: 121 S 121


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