BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00010454
         (3525 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III s...  1864   0.0  
ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III s...  1786   0.0  
ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|2...  1785   0.0  
ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, put...  1779   0.0  
ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arab...  1775   0.0  

>ref|XP_002265454.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2 [Vitis
            vinifera]
          Length = 1142

 Score = 1864 bits (4828), Expect = 0.0
 Identities = 919/1143 (80%), Positives = 1016/1143 (88%), Gaps = 4/1143 (0%)
 Frame = -3

Query: 3508 RLEMDKQDFAAPVKKVVDKYQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITS 3329
            R+ + K   A PVK+ VDK+ LLPEFLKVRGLVKQHLDSFNYFV+T IKKIV+AND I S
Sbjct: 3    RMSIHKHFPADPVKQAVDKFPLLPEFLKVRGLVKQHLDSFNYFVKTDIKKIVRANDRIVS 62

Query: 3328 SVDPNIYLRYKDVWIGEPSVMTDAVTEKLTPHNCRLSDMTYAAPIYVNIEYITGSNNSKQ 3149
            SVDP+IYLR+KDV IGEPS+  D ++EKL PH CRLSDMTYAAPI VNIEYITGS+  K 
Sbjct: 63   SVDPSIYLRFKDVRIGEPSITVDGISEKLNPHTCRLSDMTYAAPILVNIEYITGSHVQKT 122

Query: 3148 TQMKRNVVIGRMPIMLRSCRCILHGKDEDELARYGECPLDPGGYFVIKGTEKVILIQEQL 2969
               K +VVIGRMPIMLRSC C+L+ KDE ELAR GECPLDPGGYFV+KGTEKVILIQEQL
Sbjct: 123  RVEKNDVVIGRMPIMLRSCCCVLYKKDEAELARLGECPLDPGGYFVVKGTEKVILIQEQL 182

Query: 2968 SKNRIIIDTDKKGCVQASVASSTETIKSKTVLKMEKEKIYLYLNQFTSKVPIMVVLKAMG 2789
            SKNRIIIDTDKKG + ASV SSTE+ KSKTV+ MEKEKI+L LNQFTSK+PIM+V+KAMG
Sbjct: 183  SKNRIIIDTDKKGNINASVTSSTESTKSKTVIVMEKEKIWLQLNQFTSKIPIMIVMKAMG 242

Query: 2788 MESDQEVVQMIGRDPRYGELLTPSIEDCVKEAVHTQHQALEFIEQKVKRLP-YSTTPQKE 2612
            MESDQEVVQM+GR+PRY  LL PS+E+C    ++TQ QALEF+E+KVK+LP Y+ + +KE
Sbjct: 243  MESDQEVVQMVGRNPRYSALLLPSMEECASHGIYTQQQALEFLERKVKKLPFYNPSLEKE 302

Query: 2611 GRALSILRDIFIANVPVRENNFRPKCIYAAVMLRRMMEAILNKDTMDDKDYVGNKRLELS 2432
            GR ++ILRD FIANVPVR+NNFRPKC+Y AVMLRRMM+AILNKD MDDKDYVGNKRLELS
Sbjct: 303  GRGMAILRDTFIANVPVRQNNFRPKCLYVAVMLRRMMDAILNKDAMDDKDYVGNKRLELS 362

Query: 2431 GQMLSLLFEDLFKTMNDEARKTMDTALSKLHRSSRFDISQ---YIVKDRITVGLERALST 2261
            GQ++SLLFEDLFKTM  E +KT+D  L+K  RSSRFD SQ   +IV+D ITVGLER LST
Sbjct: 363  GQLISLLFEDLFKTMISEVKKTIDAILAKPSRSSRFDFSQCLRFIVRDSITVGLERTLST 422

Query: 2260 GNWDVKRFRMHRKGMTQVVARLSYIATLGNMTKISPQFEKSRKVSGPRALQPSQWGMLCP 2081
            GNWDVKRFRMHRKGM+QVVARLSYI +LG+MTKISPQFEKSRKVSGPRALQPSQWGMLCP
Sbjct: 423  GNWDVKRFRMHRKGMSQVVARLSYIGSLGHMTKISPQFEKSRKVSGPRALQPSQWGMLCP 482

Query: 2080 CDTPEGESCGLVKNLALMTHVTTDEVEGPLISMCYTLGVQSLESLSGEDLHMPNSYLIIF 1901
            CDTPEGE+CGLVKNLALMTHVTTDE E PLIS+CY+LGV+ LE LSGE+LH PNS+LIIF
Sbjct: 483  CDTPEGEACGLVKNLALMTHVTTDEEESPLISLCYSLGVEDLELLSGEELHTPNSFLIIF 542

Query: 1900 NGLILGKHRQPQKFASLMRKLRRTGKIGEFVSIFVNEKQCCVYIASDGGRVCRPLVIADK 1721
            NGLILGKHR+PQ+FA+ +RKLRR GKIGEFVS+FVNEKQ CVYIASDGGRVCRP+VIADK
Sbjct: 543  NGLILGKHRRPQRFANALRKLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPVVIADK 602

Query: 1720 GVSRIKEHHMKELKDGYRTFHSFLKEGLIEYLDVNEENNALIALYEENANAETTHIEIEP 1541
            G SRIKEHHMKEL DG RTF  FL++GLIEYLDVNEENNALIALYE +A  ETTHIEIEP
Sbjct: 603  GKSRIKEHHMKELIDGVRTFDDFLRDGLIEYLDVNEENNALIALYEADAKPETTHIEIEP 662

Query: 1540 FTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLVYPQRPLLT 1361
            FTILGVCAGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMD+L+YLLVYPQRPLLT
Sbjct: 663  FTILGVCAGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDSLLYLLVYPQRPLLT 722

Query: 1360 TRTINLVNYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKMSAVSQK 1181
            TRTI LV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV+KK SAV+Q+
Sbjct: 723  TRTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVMKKFSAVNQR 782

Query: 1180 YETGVSDRIVRPQREGYEADKMQILDDDGIAAPGQIIRPNDIYINKQSPKDIRSTVGNSK 1001
            YE   SDRIVRP + G++A++MQILDDDG+AAPG+II+PNDIYINK+SP   +  + +  
Sbjct: 783  YENNASDRIVRPLKVGHDAERMQILDDDGLAAPGEIIKPNDIYINKESPIITKGPLISPV 842

Query: 1000 SLSDSQYKPSKQTYKGPEGETPVVDRVSLCSDRNSNLCIKFMIRHTRRPEVGDKFSSRHG 821
             L DS YKPS+QT+KGPEGE  VVDRV+LCSD+NSNLCIKF+IRHTRRPEVGDKFSSRHG
Sbjct: 843  GLPDSAYKPSRQTFKGPEGEASVVDRVALCSDKNSNLCIKFLIRHTRRPEVGDKFSSRHG 902

Query: 820  QKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSDGRFHYGS 641
            QKGVCGTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGS
Sbjct: 903  QKGVCGTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGS 962

Query: 640  AFGEPSGHADKXXXXXXXXXXXXXXXXXXXXGKDFIYSGITGEPLQAYIFMGPIYYQKLK 461
            AFGEPSGHADK                    GKDFIYSGITG PLQAYIFMGPIYYQKLK
Sbjct: 963  AFGEPSGHADK----VETISKTLVKHGFSYSGKDFIYSGITGCPLQAYIFMGPIYYQKLK 1018

Query: 460  HMVLDKMHARGSGPRVMITRQPTEGKSRNGGLRVGEMERDCLIAYGASMLIYERLMISSD 281
            HMVLDKMHARGSGPRVM+TRQPTEG++RNGGLRVGEMERDCLIAYGASMLI+ERLM+SSD
Sbjct: 1019 HMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMVSSD 1078

Query: 280  PFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQELQAMNIIPRLK 101
            PFEVQVCR CGLLGYYN KLK GICSTCKNG+NISTMKLPYACKLLFQELQAMN++PRLK
Sbjct: 1079 PFEVQVCRVCGLLGYYNHKLKIGICSTCKNGDNISTMKLPYACKLLFQELQAMNVVPRLK 1138

Query: 100  LTE 92
            LTE
Sbjct: 1139 LTE 1141


>ref|XP_004141655.1| PREDICTED: DNA-directed RNA polymerase III subunit RPC2-like [Cucumis
            sativus]
          Length = 1158

 Score = 1786 bits (4626), Expect = 0.0
 Identities = 889/1144 (77%), Positives = 989/1144 (86%), Gaps = 2/1144 (0%)
 Frame = -3

Query: 3517 SPLRLEMDKQDFAAPVKKVVDKYQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDL 3338
            +P+  ++DKQ    P+K  VDK+QLLPEFLKVRGLVKQHLDSFNYFV T+IKKIV+AND 
Sbjct: 20   NPIDSDIDKQFIGLPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNTEIKKIVKANDR 79

Query: 3337 ITSSVDPNIYLRYKDVWIGEPSVMTDAVTEKLTPHNCRLSDMTYAAPIYVNIEYITGSNN 3158
            I SS DP+IYLR+ DV IGEPSV  +AV+E + PH CRLSD+TYAAPI V+IEYI  S+ 
Sbjct: 80   IESSTDPSIYLRFLDVRIGEPSVTVNAVSETINPHMCRLSDLTYAAPILVDIEYIEESHA 139

Query: 3157 SKQTQMKRNVVIGRMPIMLRSCRCILHGKDEDELARYGECPLDPGGYFVIKGTEKVILIQ 2978
             K  + K++VVIGRMPIMLRS  C+LHGKDE ELAR GECPLDPGGYF+IKGTEKV+LIQ
Sbjct: 140  QKAPREKKDVVIGRMPIMLRSRCCVLHGKDEAELARLGECPLDPGGYFIIKGTEKVVLIQ 199

Query: 2977 EQLSKNRIIIDTDKKGCVQASVASSTETIKSKTVLKMEKEKIYLYLNQFTS-KVPIMVVL 2801
            EQLSKNRIIIDTDKKG + ASV SSTE  KSKTV+KME EKIYL LN FT+ K+PIMVVL
Sbjct: 200  EQLSKNRIIIDTDKKGNINASVTSSTEATKSKTVIKMENEKIYLQLNIFTTPKIPIMVVL 259

Query: 2800 KAMGMESDQEVVQMIGRDPRYGELLTPSIEDCVKEAVHTQHQALEFIEQKVKRLPY-STT 2624
            KAMGMES QEVVQM+GRDPRYG LL PSIE+C KE ++TQ QALE++E KVK+  + S  
Sbjct: 260  KAMGMESIQEVVQMVGRDPRYGALLLPSIEECAKEKIYTQEQALEYLETKVKKFQFASAP 319

Query: 2623 PQKEGRALSILRDIFIANVPVRENNFRPKCIYAAVMLRRMMEAILNKDTMDDKDYVGNKR 2444
            P+KEGRAL ILRD+F+ANVPV +NNF PKCIY AVM+RRMM+AIL+KD MDDKDYVGNKR
Sbjct: 320  PEKEGRALGILRDVFLANVPVYKNNFHPKCIYVAVMMRRMMDAILSKDAMDDKDYVGNKR 379

Query: 2443 LELSGQMLSLLFEDLFKTMNDEARKTMDTALSKLHRSSRFDISQYIVKDRITVGLERALS 2264
            LELSGQ++SLLFEDLFKTM  E +KT+D  L K  RSSRFD SQ++  + I+ GLER LS
Sbjct: 380  LELSGQLISLLFEDLFKTMVSEVKKTIDKLLGKHSRSSRFDFSQHLNSNIISFGLERTLS 439

Query: 2263 TGNWDVKRFRMHRKGMTQVVARLSYIATLGNMTKISPQFEKSRKVSGPRALQPSQWGMLC 2084
            TGNWDVKRFRMHRKGM+QV+ARLS+I+T+G++T++SPQFEKSRKVSGPRALQPSQWGMLC
Sbjct: 440  TGNWDVKRFRMHRKGMSQVLARLSFISTMGHVTRVSPQFEKSRKVSGPRALQPSQWGMLC 499

Query: 2083 PCDTPEGESCGLVKNLALMTHVTTDEVEGPLISMCYTLGVQSLESLSGEDLHMPNSYLII 1904
            PCDTPEGE+CGLVKNLALMTHVTTD+ EGPLIS+CY LGV+ LE LS E+LH PNS+L+I
Sbjct: 500  PCDTPEGEACGLVKNLALMTHVTTDQEEGPLISLCYCLGVEDLELLSAEELHTPNSFLVI 559

Query: 1903 FNGLILGKHRQPQKFASLMRKLRRTGKIGEFVSIFVNEKQCCVYIASDGGRVCRPLVIAD 1724
            FNG ILGKHR+PQ FA+ MR LRR GKIGEFVS+FVNEKQ CVYIASDGGRVCRPLVIAD
Sbjct: 560  FNGRILGKHRRPQYFATGMRMLRRAGKIGEFVSVFVNEKQHCVYIASDGGRVCRPLVIAD 619

Query: 1723 KGVSRIKEHHMKELKDGYRTFHSFLKEGLIEYLDVNEENNALIALYEENANAETTHIEIE 1544
            KGVSRIKE+HMKEL DG RTF  FL++GLIEYLDVNEENNALIALYE  A  ETTHIEIE
Sbjct: 620  KGVSRIKEYHMKELSDGVRTFDDFLRDGLIEYLDVNEENNALIALYEGEATPETTHIEIE 679

Query: 1543 PFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLVYPQRPLL 1364
            PFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+YLLVYPQRPLL
Sbjct: 680  PFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLRRMDTLLYLLVYPQRPLL 739

Query: 1363 TTRTINLVNYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKMSAVSQ 1184
            TT+TI LV YDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV KK S+V+Q
Sbjct: 740  TTKTIELVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVFKKYSSVNQ 799

Query: 1183 KYETGVSDRIVRPQREGYEADKMQILDDDGIAAPGQIIRPNDIYINKQSPKDIRSTVGNS 1004
            KYE   +DRIVRP R       MQILDDDG+AAPG+IIRPNDIY+NKQSP  ++ +    
Sbjct: 800  KYENNTADRIVRPNRNEDFTGNMQILDDDGLAAPGEIIRPNDIYVNKQSPIIMKGS--PL 857

Query: 1003 KSLSDSQYKPSKQTYKGPEGETPVVDRVSLCSDRNSNLCIKFMIRHTRRPEVGDKFSSRH 824
              + D+ Y+P +Q +KG EGE  VVDRV+L +D+N  LCIKF+IR TRRPE+GDKFSSRH
Sbjct: 858  PGIPDNAYRPCRQIFKGSEGEPTVVDRVALSTDKNDCLCIKFLIRQTRRPELGDKFSSRH 917

Query: 823  GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSDGRFHYG 644
            GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYG
Sbjct: 918  GQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYG 977

Query: 643  SAFGEPSGHADKXXXXXXXXXXXXXXXXXXXXGKDFIYSGITGEPLQAYIFMGPIYYQKL 464
            SAFGEPSGHADK                    GKDF+YSGITG PLQAYIFMGPIYYQKL
Sbjct: 978  SAFGEPSGHADK----VDAISETLIKRGFSYNGKDFLYSGITGCPLQAYIFMGPIYYQKL 1033

Query: 463  KHMVLDKMHARGSGPRVMITRQPTEGKSRNGGLRVGEMERDCLIAYGASMLIYERLMISS 284
            KHMVLDKMHARGSGPRVM+TRQPTEG++RNGGLRVGEMERDCLIAYGASMLIYERLMISS
Sbjct: 1034 KHMVLDKMHARGSGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIYERLMISS 1093

Query: 283  DPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQELQAMNIIPRL 104
            DPFEVQVCR CGLLGYYN KLKTGICS+CKNG+NISTMKLPYACKLL QELQ+MNI+PRL
Sbjct: 1094 DPFEVQVCRVCGLLGYYNHKLKTGICSSCKNGDNISTMKLPYACKLLIQELQSMNIVPRL 1153

Query: 103  KLTE 92
            KL E
Sbjct: 1154 KLAE 1157


>ref|XP_002321356.1| predicted protein [Populus trichocarpa] gi|222868352|gb|EEF05483.1|
            predicted protein [Populus trichocarpa]
          Length = 1141

 Score = 1785 bits (4622), Expect = 0.0
 Identities = 881/1140 (77%), Positives = 991/1140 (86%), Gaps = 4/1140 (0%)
 Frame = -3

Query: 3499 MDKQDFAA-PVKKVVDKYQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSSV 3323
            +DKQ  AA PVK  VDK+QLLPEFLK RGLVKQHLDSFNYF+   IKKIV+AND I S+V
Sbjct: 4    IDKQKHAAAPVKSAVDKFQLLPEFLKGRGLVKQHLDSFNYFINIGIKKIVRANDRIVSTV 63

Query: 3322 DPNIYLRYKDVWIGEPSVMTDAVTEKLTPHNCRLSDMTYAAPIYVNIEYITGSNNSKQTQ 3143
            DP++YLR+ DV IG+PS++ DA++E++TPH CRLSD TYAAPI VNIEYI+GS+  K+  
Sbjct: 64   DPSLYLRFTDVKIGKPSMVVDAISEQITPHMCRLSDTTYAAPILVNIEYISGSHGRKEKM 123

Query: 3142 MKRNVVIGRMPIMLRSCRCILHGKDEDELARYGECPLDPGGYFVIKGTEKVILIQEQLSK 2963
            +K +VVIGRMPIMLRSC C+L+GK+E ELAR GECPLDPGGYFV+KGTEKVILIQEQLSK
Sbjct: 124  IKNDVVIGRMPIMLRSCCCVLYGKNEAELARLGECPLDPGGYFVVKGTEKVILIQEQLSK 183

Query: 2962 NRIIIDTDKKGCVQASVASSTETIKSKTVLKMEKEKIYLYLNQFTSKVPIMVVLKAMGME 2783
            NRIIID DKKG + ASV SSTE  KSKTV+ MEKEK+YL LNQF  K+PIMVV+KAMGME
Sbjct: 184  NRIIIDNDKKGNINASVTSSTEATKSKTVILMEKEKMYLCLNQFAKKIPIMVVMKAMGME 243

Query: 2782 SDQEVVQMIGRDPRYGELLTPSIEDCVKEAVHTQHQALEFIEQKVKRLPYSTTP-QKEGR 2606
            SDQEVVQM+GRDPRY  LL PSIE+C    V+TQ QALE++E  VKR  YS++  +KE R
Sbjct: 244  SDQEVVQMVGRDPRYSALLLPSIEECASHGVYTQQQALEYLEAMVKRSTYSSSSTEKENR 303

Query: 2605 ALSILRDIFIANVPVRENNFRPKCIYAAVMLRRMMEAILNKDTMDDKDYVGNKRLELSGQ 2426
            AL+ILRD+FIANVPVR+NNFRPKCIY AVMLRRMMEA+LNKD MDDKDYVGNKRLELSGQ
Sbjct: 304  ALAILRDVFIANVPVRKNNFRPKCIYVAVMLRRMMEALLNKDAMDDKDYVGNKRLELSGQ 363

Query: 2425 MLSLLFEDLFKTMNDEARKTMDTALSKLHRSSRFDISQYIVKDRITVGLERALSTGNWDV 2246
            ++SLLFEDLFKTM  E +KT DT L K +RSSRFD SQYIV+D IT GLERALSTGNWDV
Sbjct: 364  LISLLFEDLFKTMITEVQKTADTLLVKQNRSSRFDFSQYIVRDSITNGLERALSTGNWDV 423

Query: 2245 KRFRMHRKGMTQVVARLSYIATLGNMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 2066
            KRFRM+RKG+TQV+ RLSY+A+LG+MT+ISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE
Sbjct: 424  KRFRMNRKGVTQVLVRLSYMASLGHMTRISPQFEKSRKVSGPRALQPSQWGMLCPCDTPE 483

Query: 2065 GESCGLVKNLALMTHVTTDEVEGPLISMCYTLGVQSLESLSGEDLHMPNSYLIIFNGLIL 1886
            GE+CGLVKNLALMTHVTTDE E PLIS+C  LGV+ LE LSGE+LH PNS+L+IFNGLIL
Sbjct: 484  GEACGLVKNLALMTHVTTDEEESPLISLCKCLGVEDLELLSGEELHTPNSFLVIFNGLIL 543

Query: 1885 GKHRQPQKFASLMRKLRRTGKIGEFVSIFVNEKQCCVYIASDGGRVCRPLVIADKGVSRI 1706
            GKHR+PQ+FA+ MRKLRR GKIGEFVS+FVNEKQ  VYIASDGGRVCRPLVIADKGVSRI
Sbjct: 544  GKHRRPQQFANAMRKLRRAGKIGEFVSVFVNEKQRAVYIASDGGRVCRPLVIADKGVSRI 603

Query: 1705 KEHHMKELKDGYRTFHSFLKEGLIEYLDVNEENNALIALYEENANAETTHIEIEPFTILG 1526
            KEHHM+EL DG RTF  FL EGLIEYLDVNEENNALIALYE  A  ETTHIEIEPFTILG
Sbjct: 604  KEHHMRELMDGARTFDDFLHEGLIEYLDVNEENNALIALYEWEATPETTHIEIEPFTILG 663

Query: 1525 VCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLVYPQRPLLTTRTIN 1346
            V AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQ  RMD+L+YLLVYPQRPLLTTRTI 
Sbjct: 664  VVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQASRMDSLLYLLVYPQRPLLTTRTIE 723

Query: 1345 LVNYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKMSAVSQKYETGV 1166
            LV YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KK +  +QKYE G 
Sbjct: 724  LVGYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVLKKYTCTNQKYENGA 783

Query: 1165 SDRIVRPQREGYEADKMQILDDDGIAAPGQIIRPNDIYINKQSPKDIRSTVGNSKSLSDS 986
            SDRI+RP++     ++ ++LDDDG+AAPG+IIR  DIYINK+SP + R  + ++ +L+D 
Sbjct: 784  SDRILRPRK---NEERERVLDDDGLAAPGEIIRHGDIYINKESPIETRGPLKSAAALADV 840

Query: 985  QYKPSKQTYKGPEGETPVVDRVSLCSDRNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVC 806
            +Y+P  Q +KG EGE+ VVDRV+LCSD+N+NLCIK+ IRHTRRPEVGDKFSSRHGQKGVC
Sbjct: 841  KYRPCAQIFKGTEGESCVVDRVALCSDKNNNLCIKYKIRHTRRPEVGDKFSSRHGQKGVC 900

Query: 805  GTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSDGRFHYGSAFGEP 626
            GTI+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEP
Sbjct: 901  GTIIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEP 960

Query: 625  SGHADK--XXXXXXXXXXXXXXXXXXXXGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMV 452
            SGHAD+                      GKDFIYSGITG PLQAYIFMGPIYYQKLKHMV
Sbjct: 961  SGHADRVEAIRHFLSLIETLVKHGFSYNGKDFIYSGITGCPLQAYIFMGPIYYQKLKHMV 1020

Query: 451  LDKMHARGSGPRVMITRQPTEGKSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFE 272
            LDKMHARGSGPRVM+TRQPT+G++RNGGLRVGEME+DCL+AYG SML+YERLM+SSD FE
Sbjct: 1021 LDKMHARGSGPRVMLTRQPTDGRARNGGLRVGEMEKDCLVAYGTSMLLYERLMVSSDQFE 1080

Query: 271  VQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQELQAMNIIPRLKLTE 92
             QVCR CGLLGYYN KLK  +C+TCKNG+ +STMKLPYACKLL QELQ+MNI+PRLKL E
Sbjct: 1081 AQVCRACGLLGYYNQKLKAAMCTTCKNGDKVSTMKLPYACKLLIQELQSMNIVPRLKLAE 1140


>ref|XP_002525541.1| DNA-directed RNA polymerase III subunit, putative [Ricinus communis]
            gi|223535120|gb|EEF36800.1| DNA-directed RNA polymerase
            III subunit, putative [Ricinus communis]
          Length = 1139

 Score = 1779 bits (4607), Expect = 0.0
 Identities = 877/1136 (77%), Positives = 985/1136 (86%)
 Frame = -3

Query: 3499 MDKQDFAAPVKKVVDKYQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSSVD 3320
            +DKQ   AP+K  VDK+QLLPEFLKVRGLVKQHLDSFNYFV   IKKIV+AND I S+VD
Sbjct: 22   IDKQKLTAPIKSAVDKFQLLPEFLKVRGLVKQHLDSFNYFVNIGIKKIVRANDRIVSTVD 81

Query: 3319 PNIYLRYKDVWIGEPSVMTDAVTEKLTPHNCRLSDMTYAAPIYVNIEYITGSNNSKQTQM 3140
            P IYLR+KDV IG PS + D V+E+L+PH CRLSD TYAAPI VN+EYI GS++ K    
Sbjct: 82   PGIYLRFKDVRIGTPSDIMDGVSEQLSPHMCRLSDKTYAAPILVNVEYIYGSHDQKTRVE 141

Query: 3139 KRNVVIGRMPIMLRSCRCILHGKDEDELARYGECPLDPGGYFVIKGTEKVILIQEQLSKN 2960
            K +VVIGRMPIMLRS  C+L+GKDE ELAR GECPLDPGGYFVIKGTEKVILIQEQLSKN
Sbjct: 142  KNDVVIGRMPIMLRSRSCVLYGKDEAELARLGECPLDPGGYFVIKGTEKVILIQEQLSKN 201

Query: 2959 RIIIDTDKKGCVQASVASSTETIKSKTVLKMEKEKIYLYLNQFTSKVPIMVVLKAMGMES 2780
            RIIIDTDKKG + ASV SSTE  KSKT+++MEKEK+YL LNQF  K+PIMVV+KAMGMES
Sbjct: 202  RIIIDTDKKGNINASVTSSTEATKSKTIIQMEKEKMYLCLNQFVKKIPIMVVIKAMGMES 261

Query: 2779 DQEVVQMIGRDPRYGELLTPSIEDCVKEAVHTQHQALEFIEQKVKRLPYSTTPQKEGRAL 2600
            DQEVVQM+GRDPRY  LL PSIE+C   +++TQ +ALE+++ K            E RAL
Sbjct: 262  DQEVVQMVGRDPRYSALLLPSIEECAGLSIYTQQKALEYLDGK------------ENRAL 309

Query: 2599 SILRDIFIANVPVRENNFRPKCIYAAVMLRRMMEAILNKDTMDDKDYVGNKRLELSGQML 2420
            +ILRD+F+ANVPV +NNFRPKC+Y AVMLRRMMEA+LNKD MDDKDYVGNKRLELSGQ++
Sbjct: 310  TILRDVFLANVPVHKNNFRPKCLYVAVMLRRMMEAMLNKDAMDDKDYVGNKRLELSGQLI 369

Query: 2419 SLLFEDLFKTMNDEARKTMDTALSKLHRSSRFDISQYIVKDRITVGLERALSTGNWDVKR 2240
            SLLFEDLFKTM  E ++T+DT L+K +RSSRFD++QYIV+D IT GLER LSTGN+DVKR
Sbjct: 370  SLLFEDLFKTMITEVQRTIDTVLTKQNRSSRFDLAQYIVRDNITNGLERTLSTGNFDVKR 429

Query: 2239 FRMHRKGMTQVVARLSYIATLGNMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 2060
            F+MHRKGMTQV+ RLSYIA+LG MT++SPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE
Sbjct: 430  FKMHRKGMTQVLVRLSYIASLGMMTRVSPQFEKSRKVSGPRALQPSQWGMLCPCDTPEGE 489

Query: 2059 SCGLVKNLALMTHVTTDEVEGPLISMCYTLGVQSLESLSGEDLHMPNSYLIIFNGLILGK 1880
            +CGLVKNLALMTHVTTD+ EGPLIS+CY LGV+ LE LSGE+LH PNS+L+IFNGLILGK
Sbjct: 490  ACGLVKNLALMTHVTTDDEEGPLISLCYCLGVEDLELLSGEELHTPNSFLVIFNGLILGK 549

Query: 1879 HRQPQKFASLMRKLRRTGKIGEFVSIFVNEKQCCVYIASDGGRVCRPLVIADKGVSRIKE 1700
            HR+PQ F + MRKLRR GKIGEFVS+FVNEKQ  VY+ASDGGRVCRPLVIAD+GVSRIKE
Sbjct: 550  HRRPQYFVNSMRKLRRAGKIGEFVSVFVNEKQRAVYLASDGGRVCRPLVIADRGVSRIKE 609

Query: 1699 HHMKELKDGYRTFHSFLKEGLIEYLDVNEENNALIALYEENANAETTHIEIEPFTILGVC 1520
            HHMKEL+DG RTF  FL++GLIEYLDVNEENNAL+ALYE  A  ETTHIEIEPFTILGVC
Sbjct: 610  HHMKELRDGVRTFDDFLRDGLIEYLDVNEENNALVALYEGEATPETTHIEIEPFTILGVC 669

Query: 1519 AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYLLVYPQRPLLTTRTINLV 1340
            AGLIP+PHHNQSPRNTYQCAMGKQAMGNIAYNQL RMD+L+YLLVYPQRPLLTTRTI LV
Sbjct: 670  AGLIPFPHHNQSPRNTYQCAMGKQAMGNIAYNQLFRMDSLLYLLVYPQRPLLTTRTIELV 729

Query: 1339 NYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIVIKKMSAVSQKYETGVSD 1160
             YDKLGAGQNATVAVMSYSGYDIEDAIVMNK+SLDRGFGRCIV+KK  A+ QKYE G SD
Sbjct: 730  GYDKLGAGQNATVAVMSYSGYDIEDAIVMNKASLDRGFGRCIVMKKYPAIRQKYENGASD 789

Query: 1159 RIVRPQREGYEADKMQILDDDGIAAPGQIIRPNDIYINKQSPKDIRSTVGNSKSLSDSQY 980
            RI+RP R     ++ ++LD DG+AAPG+II+P+DIY+ K+ P D    V +S +L + +Y
Sbjct: 790  RILRPDR---TVERERVLDYDGLAAPGEIIKPSDIYVKKECPIDTMGPVKSSAALENIKY 846

Query: 979  KPSKQTYKGPEGETPVVDRVSLCSDRNSNLCIKFMIRHTRRPEVGDKFSSRHGQKGVCGT 800
            +PS  +YKGPEGE+PV+DRV+L SDRN+NLCIK MIRHTRRPEVGDKFSSRHGQKGVCGT
Sbjct: 847  RPSPLSYKGPEGESPVIDRVALSSDRNNNLCIKVMIRHTRRPEVGDKFSSRHGQKGVCGT 906

Query: 799  IVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKAGVSDGRFHYGSAFGEPSG 620
            I+QQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLG KAGVS GRFHYGSAFGEPSG
Sbjct: 907  IIQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGGKAGVSCGRFHYGSAFGEPSG 966

Query: 619  HADKXXXXXXXXXXXXXXXXXXXXGKDFIYSGITGEPLQAYIFMGPIYYQKLKHMVLDKM 440
            HAD                     GKD IYSGITG PLQAYIFMGPIYYQKLKHMVLDKM
Sbjct: 967  HAD----TVEAISETLVNRGFSYNGKDIIYSGITGCPLQAYIFMGPIYYQKLKHMVLDKM 1022

Query: 439  HARGSGPRVMITRQPTEGKSRNGGLRVGEMERDCLIAYGASMLIYERLMISSDPFEVQVC 260
            HARG+GPRVM+TRQPTEG++RNGGLRVGEMERDCLIAYGASMLI+ERLMISSDPFEVQVC
Sbjct: 1023 HARGNGPRVMLTRQPTEGRARNGGLRVGEMERDCLIAYGASMLIFERLMISSDPFEVQVC 1082

Query: 259  RKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQELQAMNIIPRLKLTE 92
            R CGLLGY+N KL+ GICSTCKNG+NISTMKLPYACKLL QELQ+MNI+PRLKL E
Sbjct: 1083 RVCGLLGYFNQKLRAGICSTCKNGDNISTMKLPYACKLLIQELQSMNIVPRLKLAE 1138


>ref|XP_002863522.1| hypothetical protein ARALYDRAFT_917015 [Arabidopsis lyrata subsp.
            lyrata] gi|297309357|gb|EFH39781.1| hypothetical protein
            ARALYDRAFT_917015 [Arabidopsis lyrata subsp. lyrata]
          Length = 1165

 Score = 1775 bits (4597), Expect = 0.0
 Identities = 869/1154 (75%), Positives = 993/1154 (86%), Gaps = 18/1154 (1%)
 Frame = -3

Query: 3499 MDKQDFAAPVKKVVDKYQLLPEFLKVRGLVKQHLDSFNYFVRTQIKKIVQANDLITSSVD 3320
            +DK+  +AP+K   DK+QL+PEFLKVRGLVKQHLDSFNYF+   IKKIV AN  I S  D
Sbjct: 17   IDKEKLSAPIKSTADKFQLVPEFLKVRGLVKQHLDSFNYFINVGIKKIVHANCRIASVTD 76

Query: 3319 PNIYLRYKDVWIGEPSVMTDAVTEKLTPHNCRLSDMTYAAPIYVNIEYITGSNNSKQTQM 3140
            P+IYLR+K+V +GEPS+M   ++E++ PH CRL+DMTYAAPIYVNIEY+ GS+  K T +
Sbjct: 77   PSIYLRFKNVRVGEPSIMNINISEEINPHMCRLADMTYAAPIYVNIEYVHGSHGKKATSV 136

Query: 3139 KRNVVIGRMPIMLRSCRCILHGKDEDELARYGECPLDPGGYFVIKGTEKVILIQEQLSKN 2960
            K + +IGRMPIMLRSCRC+LHGKDE+ELAR GECPLDPGGYFVIKGTEKV+LIQEQLSKN
Sbjct: 137  KNDFIIGRMPIMLRSCRCVLHGKDEEELARLGECPLDPGGYFVIKGTEKVLLIQEQLSKN 196

Query: 2959 RIIIDTDKKGCVQASVASSTETIKSKTVLKMEKEKIYLYLNQFTSKVPIMVVLKAMGMES 2780
            RIIID+DKKG + ASV SSTE  KSKTV++MEKEKIYL+L+QF  K+PI++VLKAMGMES
Sbjct: 197  RIIIDSDKKGNINASVTSSTEMTKSKTVIQMEKEKIYLFLHQFVKKIPIVIVLKAMGMES 256

Query: 2779 DQEVVQMIGRDPRYGELLTPSIEDCVKEAVHTQHQALEFIEQKVKRLPYSTTPQKEGRAL 2600
            DQE+VQM+GRDPR+   L PSIE+CV E V+TQ QAL+++E KVK+  Y   P+K+GRAL
Sbjct: 257  DQEIVQMVGRDPRFSASLLPSIEECVSEGVNTQKQALDYLEAKVKKTSYGPPPEKDGRAL 316

Query: 2599 SILRDIFIANVPVRENNFRPKCIYAAVMLRRMMEAILNKDTMDDKDYVGNKRLELSGQML 2420
             ILRD+F+A+VPVR+NNFR KC Y  VMLRRM+EA+LNKD+MDDKDYVGNKRLELSGQ++
Sbjct: 317  YILRDLFLAHVPVRDNNFRQKCFYVGVMLRRMIEAMLNKDSMDDKDYVGNKRLELSGQLM 376

Query: 2419 SLLFEDLFKTMNDEARKTMDTALSKLHRSSRFDISQYIV----KDRITVGLERALSTGNW 2252
            SLLFEDLFKTM  EA K +D  LSK  R+SRFD SQY+     ++ I+VGLER LSTGN+
Sbjct: 377  SLLFEDLFKTMLSEAIKKVDAILSKPSRASRFDFSQYLTTGDSQNTISVGLERTLSTGNF 436

Query: 2251 DVKRFRMHRKGMTQVVARLSYIATLGNMTKISPQFEKSRKVSGPRALQPSQWGMLCPCDT 2072
            D+KRFRMHRKGMTQV+ RLS+I +LG +TKISPQFEKSRKVSGPR+LQPSQWGMLCPCDT
Sbjct: 437  DIKRFRMHRKGMTQVLTRLSFIGSLGFITKISPQFEKSRKVSGPRSLQPSQWGMLCPCDT 496

Query: 2071 PEGESCGLVKNLALMTHVTTDEVEGPLISMCYTLGVQSLESLSGEDLHMPNSYLIIFNGL 1892
            PEGESCGLVKNLALMTHVTTDE EGPL++MCY LGV  LE LS E+LH P+S+L+I NGL
Sbjct: 497  PEGESCGLVKNLALMTHVTTDEEEGPLVAMCYKLGVTDLEVLSAEELHTPDSFLVILNGL 556

Query: 1891 ILGKHRQPQKFASLMRKLRRTGKIGEFVSIFVNEKQCCVYIASDGGRVCRPLVIADKGVS 1712
            ILGKHR+PQ FA+ +R+LRR GKIGEFVS+F NEKQ CVY+ASDGGRVCRPLVIADKG+S
Sbjct: 557  ILGKHRRPQYFANSLRRLRRAGKIGEFVSVFTNEKQHCVYVASDGGRVCRPLVIADKGIS 616

Query: 1711 RIKEHHMKELKDGYRTFHSFLKEGLIEYLDVNEENNALIALYEENA-------------N 1571
            R+K+HHMKEL+DG RTF  F+++GLIEYLDVNEENNALIALYE  A              
Sbjct: 617  RVKQHHMKELQDGVRTFDDFIRDGLIEYLDVNEENNALIALYESEATTELDEGAEAAKIK 676

Query: 1570 AETTHIEIEPFTILGVCAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLCRMDTLIYL 1391
            A+TTHIEIEPFTILGV AGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQL RMDTL+YL
Sbjct: 677  ADTTHIEIEPFTILGVVAGLIPYPHHNQSPRNTYQCAMGKQAMGNIAYNQLNRMDTLLYL 736

Query: 1390 LVYPQRPLLTTRTINLVNYDKLGAGQNATVAVMSYSGYDIEDAIVMNKSSLDRGFGRCIV 1211
            LVYPQRPLLTTRTI LV YDKLGAGQNATVAVMS SGYDIEDAIVMNKSSLDRGFGRCIV
Sbjct: 737  LVYPQRPLLTTRTIELVGYDKLGAGQNATVAVMSNSGYDIEDAIVMNKSSLDRGFGRCIV 796

Query: 1210 IKKMSAVSQKYETGVSDRIVRPQREGYEADKMQILDDDGIAAPGQIIRPNDIYINKQSPK 1031
            +KK+ A  QKYE G  DRI+ PQR G +A+KMQILDDDGIA+PG+IIRPND+YI KQ P 
Sbjct: 797  MKKIVATCQKYENGTVDRILMPQRTGPDAEKMQILDDDGIASPGEIIRPNDVYIYKQIPV 856

Query: 1030 -DIRSTVGNSKSLSDSQYKPSKQTYKGPEGETPVVDRVSLCSDRNSNLCIKFMIRHTRRP 854
               R  +  +  LSDSQY+P+++ +KGPEGET VVDRV+LCSD++ +LCIK++IRHTRRP
Sbjct: 857  CTTRDKI--TSPLSDSQYRPAREFFKGPEGETQVVDRVALCSDKSGSLCIKYIIRHTRRP 914

Query: 853  EVGDKFSSRHGQKGVCGTIVQQEDFPFSERGICPDLIMNPHGFPSRMTVGKMIELLGSKA 674
            E+GDKFSSRHGQKGVCGTI+QQEDFPFSE GICPDLIMNPHGFPSRMTVGKMIELLGSKA
Sbjct: 915  ELGDKFSSRHGQKGVCGTIIQQEDFPFSELGICPDLIMNPHGFPSRMTVGKMIELLGSKA 974

Query: 673  GVSDGRFHYGSAFGEPSGHADKXXXXXXXXXXXXXXXXXXXXGKDFIYSGITGEPLQAYI 494
            GVS GRFHYGSAFGE SGHADK                    GKD +YSG++GEPL+AYI
Sbjct: 975  GVSCGRFHYGSAFGERSGHADK----VETISKTLVDKGFSYSGKDLLYSGLSGEPLEAYI 1030

Query: 493  FMGPIYYQKLKHMVLDKMHARGSGPRVMITRQPTEGKSRNGGLRVGEMERDCLIAYGASM 314
            FMGPIYYQKLKHMVLDKMHARGSGPRVM+TRQPTEGKS+NGGLRVGEMERDCLIAYGASM
Sbjct: 1031 FMGPIYYQKLKHMVLDKMHARGSGPRVMMTRQPTEGKSKNGGLRVGEMERDCLIAYGASM 1090

Query: 313  LIYERLMISSDPFEVQVCRKCGLLGYYNFKLKTGICSTCKNGENISTMKLPYACKLLFQE 134
            LIYERLMISSDPFEVQVCR CGLLGYYN+KLK  +CSTCKNG+NI+TMKLPYACKLLFQE
Sbjct: 1091 LIYERLMISSDPFEVQVCRACGLLGYYNYKLKKAVCSTCKNGDNIATMKLPYACKLLFQE 1150

Query: 133  LQAMNIIPRLKLTE 92
            LQ+MN++PRLKL E
Sbjct: 1151 LQSMNVVPRLKLVE 1164