BLASTX nr result
ID: Scutellaria22_contig00010398
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Scutellaria22_contig00010398
(1718 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI29879.3| unnamed protein product [Vitis vinifera] 395 e-107
ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I sub... 395 e-107
ref|XP_002526734.1| DNA-directed RNA polymerase I largest subuni... 382 e-103
ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I sub... 355 3e-95
ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 348 3e-93
>emb|CBI29879.3| unnamed protein product [Vitis vinifera]
Length = 1669
Score = 395 bits (1016), Expect = e-107
Identities = 244/585 (41%), Positives = 330/585 (56%), Gaps = 14/585 (2%)
Frame = -1
Query: 1718 YDYTVRDSDGSIIQFYYGEDGVDVHRTSFLKNFKALEDNRETICQKFQNKRQFNSYISKL 1539
YDYTVRDSDGSI+QF YG+DGVDVH+TSF+ F+AL N E +C+KF +FN YI KL
Sbjct: 1041 YDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKL 1100
Query: 1538 PEGLEEEARSYIQ----EAEDHSSEKQKVNAIEXXXXXXXXXXXXXXXXXXXXXXKFLEL 1371
P+ L ++ + +I+ E +D + K++ + F+ L
Sbjct: 1101 PKELRKKTKKFIEGFMEERQDFDNMKKQKD--------------------------FVNL 1134
Query: 1370 VKQKYLSSLAQAGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA 1191
VKQKY+SSLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA
Sbjct: 1135 VKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTA 1194
Query: 1190 SDIIKTPILTCPFLEWRXXXXXXXXXXXXXXXXVADLLENMEVQI---SIEHHKVARIYK 1020
++ IKTPI+TCP R VAD+ E+MEV I +++ H+ IYK
Sbjct: 1195 ANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYK 1254
Query: 1019 LKMKLKDTEF------VSLEDTQETLQTVFLRELEDAIENHVILLSRVNGIKNIIXXXXX 858
LKMKL + +SLED +ETL+ VF+RELEDAI+NH++LLS+++GIKN +
Sbjct: 1255 LKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRS 1314
Query: 857 XXXXXXXXXXSG-ATTRKAXXXXXXXXXXXXXXDLGSDVQKRKLQATXXXXXXXXXXXXX 681
SG DLG D QKRK QA+
Sbjct: 1315 MASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPD 1374
Query: 680 XXXXXXXEREKGKSDVDHHVDIENSKXXXXXXXXXXXXXSNAQNVDEVXXXXXXXXXXXX 501
E+ V+ V+I N++ +++
Sbjct: 1375 EGEPSAGLTEE-IDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKK 1433
Query: 500 XXXKIRIEMPSSDFSGKKIRRAVYMEVKGLSFHVHFRFTSEPHLLLAQIAQKTAKKVYIK 321
I+ K RA+ ++ KG F VHFRFT+EPH+LLAQIAQK A KVYI+
Sbjct: 1434 RFRAIK----------KDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIR 1483
Query: 320 RSGKISQCRMVQYDPDEKTVIWDDNIKPKRGSQKSDADDATLYWAVKASGVDFKSLWEMA 141
SGKI C+++ + D+ VI+ KR + ++ A++ +GVDF + W+M
Sbjct: 1484 SSGKIDLCQVIDCNKDQ--VIYYGRDPKKR--ENIPGEEKKKLPALQTAGVDFTAFWKMQ 1539
Query: 140 DDLDLSRLYSNNITSVLNTYGVEAARATLIREVKQVFDIYGVKID 6
D+LD+ +YSNN+ ++LNT+GVEAARAT+I+EV VF+ YGVK++
Sbjct: 1540 DELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVN 1584
>ref|XP_002277555.1| PREDICTED: DNA-directed RNA polymerase I subunit RPA1-like [Vitis
vinifera]
Length = 1740
Score = 395 bits (1016), Expect = e-107
Identities = 244/585 (41%), Positives = 330/585 (56%), Gaps = 14/585 (2%)
Frame = -1
Query: 1718 YDYTVRDSDGSIIQFYYGEDGVDVHRTSFLKNFKALEDNRETICQKFQNKRQFNSYISKL 1539
YDYTVRDSDGSI+QF YG+DGVDVH+TSF+ F+AL N E +C+KF +FN YI KL
Sbjct: 1112 YDYTVRDSDGSIVQFNYGDDGVDVHQTSFITEFEALAVNEEVVCEKFGQDGKFNGYIQKL 1171
Query: 1538 PEGLEEEARSYIQ----EAEDHSSEKQKVNAIEXXXXXXXXXXXXXXXXXXXXXXKFLEL 1371
P+ L ++ + +I+ E +D + K++ + F+ L
Sbjct: 1172 PKELRKKTKKFIEGFMEERQDFDNMKKQKD--------------------------FVNL 1205
Query: 1370 VKQKYLSSLAQAGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTA 1191
VKQKY+SSLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGE+NVTLGIPRLQEILMTA
Sbjct: 1206 VKQKYISSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEVNVTLGIPRLQEILMTA 1265
Query: 1190 SDIIKTPILTCPFLEWRXXXXXXXXXXXXXXXXVADLLENMEVQI---SIEHHKVARIYK 1020
++ IKTPI+TCP R VAD+ E+MEV I +++ H+ IYK
Sbjct: 1266 ANDIKTPIMTCPLQMGRSKDDAERLAAKLKKVTVADITESMEVSIVPFTVQDHQTCSIYK 1325
Query: 1019 LKMKLKDTEF------VSLEDTQETLQTVFLRELEDAIENHVILLSRVNGIKNIIXXXXX 858
LKMKL + +SLED +ETL+ VF+RELEDAI+NH++LLS+++GIKN +
Sbjct: 1326 LKMKLYEPALYPPHTGISLEDCEETLEAVFVRELEDAIQNHLLLLSKISGIKNFLPDSRS 1385
Query: 857 XXXXXXXXXXSG-ATTRKAXXXXXXXXXXXXXXDLGSDVQKRKLQATXXXXXXXXXXXXX 681
SG DLG D QKRK QA+
Sbjct: 1386 MASKETDEDASGDGLAGGNGDEDDDGEDDGGAEDLGLDAQKRKQQASDEMDYGDSEGEPD 1445
Query: 680 XXXXXXXEREKGKSDVDHHVDIENSKXXXXXXXXXXXXXSNAQNVDEVXXXXXXXXXXXX 501
E+ V+ V+I N++ +++
Sbjct: 1446 EGEPSAGLTEE-IDLVEDEVEISNNEEVGISDPKDEDSKVPSKSKSSKNKKAKTEAKRKK 1504
Query: 500 XXXKIRIEMPSSDFSGKKIRRAVYMEVKGLSFHVHFRFTSEPHLLLAQIAQKTAKKVYIK 321
I+ K RA+ ++ KG F VHFRFT+EPH+LLAQIAQK A KVYI+
Sbjct: 1505 RFRAIK----------KDFDRAILVKAKGTYFEVHFRFTNEPHILLAQIAQKAANKVYIR 1554
Query: 320 RSGKISQCRMVQYDPDEKTVIWDDNIKPKRGSQKSDADDATLYWAVKASGVDFKSLWEMA 141
SGKI C+++ + D+ VI+ KR + ++ A++ +GVDF + W+M
Sbjct: 1555 SSGKIDLCQVIDCNKDQ--VIYYGRDPKKR--ENIPGEEKKKLPALQTAGVDFTAFWKMQ 1610
Query: 140 DDLDLSRLYSNNITSVLNTYGVEAARATLIREVKQVFDIYGVKID 6
D+LD+ +YSNN+ ++LNT+GVEAARAT+I+EV VF+ YGVK++
Sbjct: 1611 DELDVRYVYSNNVHAMLNTFGVEAARATIIKEVFNVFNAYGVKVN 1655
>ref|XP_002526734.1| DNA-directed RNA polymerase I largest subunit, putative [Ricinus
communis] gi|223533923|gb|EEF35648.1| DNA-directed RNA
polymerase I largest subunit, putative [Ricinus communis]
Length = 1686
Score = 382 bits (981), Expect = e-103
Identities = 245/586 (41%), Positives = 323/586 (55%), Gaps = 16/586 (2%)
Frame = -1
Query: 1718 YDYTVRDSDGSIIQFYYGEDGVDVHRTSFLKNFKALEDNRETICQKFQNKR-QFNSYISK 1542
YD+TVRD+DGS++QFYYGEDGVDVH+TSF+ FK L N++ I ++ + FNSYIS+
Sbjct: 1041 YDHTVRDADGSVVQFYYGEDGVDVHQTSFIAKFKELALNQDMIYKRSGGQLGAFNSYISE 1100
Query: 1541 LPEGLEEEARSYIQEAEDHSSEKQKVNAIEXXXXXXXXXXXXXXXXXXXXXXKFLELVKQ 1362
LPE L+E+A ++ + + E L+KQ
Sbjct: 1101 LPEALKEKADRFLDDFSIMGRIASNLVKRED----------------------LYNLMKQ 1138
Query: 1361 KYLSSLAQAGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDI 1182
K+L SLAQ GEPVGV+AAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTAS
Sbjct: 1139 KFLLSLAQPGEPVGVLAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASID 1198
Query: 1181 IKTPILTCPFLEWRXXXXXXXXXXXXXXXXVADLLENMEVQI---SIEHHKVARIYKLKM 1011
IKTPI+TCP E R VAD++E+MEV + +I+ V RIYKLKM
Sbjct: 1199 IKTPIMTCPLQEGRTNEDADHLADKLRKVTVADIVESMEVSVVPFAIQDGGVCRIYKLKM 1258
Query: 1010 KL------KDTEFVSLEDTQETLQTVFLRELEDAIENHVILLSRVNGIKNIIXXXXXXXX 849
KL +S+ED +ETL+ VFLRELEDAI+NH+ LLSR++GIK+ +
Sbjct: 1259 KLYRPAHYPQYANISVEDWEETLEVVFLRELEDAIQNHMFLLSRISGIKDFLPESRSRAS 1318
Query: 848 XXXXXXXSG-ATTRKAXXXXXXXXXXXXXXDLGSDVQKRKLQATXXXXXXXXXXXXXXXX 672
+G + R+ DLG D QKRKLQAT
Sbjct: 1319 GEADEDVAGDMSHREERDDDNDDDDGERADDLGLDAQKRKLQATDEMDYDDGFEEELNEG 1378
Query: 671 XXXXEREKG--KSDV---DHHVDIENSKXXXXXXXXXXXXXSNAQNVDEVXXXXXXXXXX 507
E+ +S++ D+ +I N ++ +
Sbjct: 1379 ESTASEEESGFESEIDQGDNETEISNDVMLDNEASETLPLRKPSKPKSKKKAAESPSHGE 1438
Query: 506 XXXXXKIRIEMPSSDFSGKKIRRAVYMEVKGLSFHVHFRFTSEPHLLLAQIAQKTAKKVY 327
K + + K RA+++E + + F VHF+FT+EPH+LLA+IAQKTAKKVY
Sbjct: 1439 KSKDKKKKPKAKRKSRISKDFDRAIFVEARKMHFEVHFKFTNEPHILLAEIAQKTAKKVY 1498
Query: 326 IKRSGKISQCRMVQYDPDEKTVIWDDNIKPKRGSQKSDADDATLYWAVKASGVDFKSLWE 147
I+ GKI QCR+ D E VI+ +R K D + A+ A+GVDF + W+
Sbjct: 1499 IQNPGKIEQCRVT--DCKESQVIYYGKDPKERVDLKPDVKEKVP--ALHATGVDFNTFWK 1554
Query: 146 MADDLDLSRLYSNNITSVLNTYGVEAARATLIREVKQVFDIYGVKI 9
M D LD+ +YSNNI ++L TYGVEAAR T+IRE+ VF YG+ +
Sbjct: 1555 MQDHLDVRYIYSNNIHAMLKTYGVEAARETIIREINHVFKSYGIAV 1600
>ref|XP_003537204.1| PREDICTED: DNA-directed RNA polymerase I subunit rpa1-like [Glycine
max]
Length = 1653
Score = 355 bits (910), Expect = 3e-95
Identities = 234/591 (39%), Positives = 319/591 (53%), Gaps = 20/591 (3%)
Frame = -1
Query: 1718 YDYTVRDSDGSIIQFYYGEDGVDVHRTSFLKNFKALEDNRETICQKFQNKRQFNS-YISK 1542
YD+TVRD+DGSIIQF+YGEDGVDVH+TSF+ F AL N+E + + + +S YI+K
Sbjct: 1026 YDHTVRDADGSIIQFHYGEDGVDVHQTSFITEFGALSTNKELVFSNYCRQLDRSSPYINK 1085
Query: 1541 LPEGLEEEARSYIQEAEDHSSEKQKVNAIEXXXXXXXXXXXXXXXXXXXXXXKFLELVKQ 1362
LPE LE +A + ++ S E+ FL L++
Sbjct: 1086 LPEALEGKAEKFSKQRNLGSMEQAD----------------------------FLRLMEH 1117
Query: 1361 KYLSSLAQAGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDI 1182
KY+S LAQ GEPVGV+A+QSVGEP+TQMTLNTFHLAGRGEMNVTLGIPRLQEILM A+
Sbjct: 1118 KYVSCLAQPGEPVGVLASQSVGEPATQMTLNTFHLAGRGEMNVTLGIPRLQEILMAAARD 1177
Query: 1181 IKTPILTCPFLEWRXXXXXXXXXXXXXXXXVADLLENMEVQ---ISIEHHKVARIYKLKM 1011
IKTP +TCP + VAD++++M+V +++ +V IYKL M
Sbjct: 1178 IKTPFMTCPLRHDKSMKDAICLADKLKKITVADIIKSMKVSVVPVTVLGGQVCSIYKLVM 1237
Query: 1010 KL-KDTEF-----VSLEDTQETLQTVFLRELEDAIENHVILLSRVNGIK--------NII 873
KL K ++ ++L+D +ETL+ F+RELEDAI+NH+ LLS+++GIK N
Sbjct: 1238 KLYKSKQYPEYTDITLDDWEETLRVNFVRELEDAIQNHMTLLSKISGIKKFKTDPQSNYS 1297
Query: 872 XXXXXXXXXXXXXXXSGATTRKAXXXXXXXXXXXXXXDLGSDVQKRKLQATXXXXXXXXX 693
G DLGSD QKRKLQ T
Sbjct: 1298 NSSEDAHSNGSESEKKGQNNDDDDEDGGGVEDTEGYEDLGSDAQKRKLQGTDEVDYEDGP 1357
Query: 692 XXXXXXXXXXXERE--KGKSDVDHHVDIENSKXXXXXXXXXXXXXSNAQNVDEVXXXXXX 519
E E + SDVD + + N S ++ +DE
Sbjct: 1358 EEETHDGELSEEIEGDEDGSDVDANENYNN--VTDANNSEGLEKPSKSKTIDE------- 1408
Query: 518 XXXXXXXXXKIRIEMPSSDFSGKKIRRAVYMEVKGLSFHVHFRFTSEPHLLLAQIAQKTA 339
++ E S+ + KK RA+++E KG F +HFRFT EPH+LL QIAQ+TA
Sbjct: 1409 -------KQNLKREKKKSEPTTKKYDRAIFVEAKGKHFEIHFRFTGEPHILLTQIAQRTA 1461
Query: 338 KKVYIKRSGKISQCRMVQYDPDEKTVIWDDNIKPKRGSQKSDADDATLYWAVKASGVDFK 159
KKV I+ GK+ +C+ + E VI+ K R + A + A++ SGV FK
Sbjct: 1462 KKVCIQNFGKVGECKAITC--KESGVIYYG--KDGRKRIEISASEKEQIPALQTSGVHFK 1517
Query: 158 SLWEMADDLDLSRLYSNNITSVLNTYGVEAARATLIREVKQVFDIYGVKID 6
+ WE+ DDLD+ +YSNN+ ++LN YGVEAAR T+IREV+ VF YG+ ++
Sbjct: 1518 TFWELEDDLDVRYIYSNNVHAMLNAYGVEAARETIIREVQNVFKSYGISVN 1568
>ref|XP_004165748.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase I subunit
RPA1-like [Cucumis sativus]
Length = 1652
Score = 348 bits (892), Expect = 3e-93
Identities = 218/581 (37%), Positives = 316/581 (54%), Gaps = 10/581 (1%)
Frame = -1
Query: 1718 YDYTVRDSDGSIIQFYYGEDGVDVHRTSFLKNFKALEDNRETICQKFQNKR-QFNSYISK 1542
YD+TVRD+DGS+IQF YGEDGVDVH+T+F+ F+AL N++ + + ++ ++N +I++
Sbjct: 1024 YDHTVRDADGSVIQFQYGEDGVDVHKTAFITKFEALAANQDMLYENSHHQLGKYNVFINE 1083
Query: 1541 LPEGLEEEARSYIQEAEDHSSEKQKVNAIEXXXXXXXXXXXXXXXXXXXXXXKFLELVKQ 1362
LP L E+ E +S K KV + F+ L++
Sbjct: 1084 LPSALREKG-----EFIYNSLSKDKVPGL-------------------VLKEDFIRLLEN 1119
Query: 1361 KYLSSLAQAGEPVGVIAAQSVGEPSTQMTLNTFHLAGRGEMNVTLGIPRLQEILMTASDI 1182
KYLSSLAQ GEPVGV+AAQS+GEPSTQMTLNTFH AGRGEMNVTLGIPRLQEILMTAS
Sbjct: 1120 KYLSSLAQPGEPVGVLAAQSIGEPSTQMTLNTFHHAGRGEMNVTLGIPRLQEILMTASQD 1179
Query: 1181 IKTPILTCPFLEWRXXXXXXXXXXXXXXXXVADLLENMEVQI---SIEHHKVARIYKLKM 1011
IKTPI+TCP E VAD++E+M V + S ++ IYKL++
Sbjct: 1180 IKTPIMTCPLKEGYSMDVAKGLANKLKKITVADIIESMNVTVVPFSQRKREICSIYKLRI 1239
Query: 1010 KLKDTE------FVSLEDTQETLQTVFLRELEDAIENHVILLSRVNGIKNIIXXXXXXXX 849
E +S ED + TL+TVFL ELE IE ++LLS++NGIK +
Sbjct: 1240 DFYPLENNAQHGHISPEDLENTLETVFLEELEGLIEREMVLLSKINGIKXFV--PDSQSK 1297
Query: 848 XXXXXXXSGATTRKAXXXXXXXXXXXXXXDLGSDVQKRKLQATXXXXXXXXXXXXXXXXX 669
++ ++ DLGSD +K+KLQA
Sbjct: 1298 GSSEGDEVSSSRQEEMDDDDEGNDLDVAEDLGSDXEKQKLQAN-------DEMDYEDDSE 1350
Query: 668 XXXEREKGKSDVDHHVDIENSKXXXXXXXXXXXXXSNAQNVDEVXXXXXXXXXXXXXXXK 489
++ + + VD + S ++N E+
Sbjct: 1351 DDLNAKESSTGFESEVDQGDEAEITNNDMIEIVKDSASENQPEIVDVSKSMSKEKTTETS 1410
Query: 488 IRIEMPSSDFSGKKIRRAVYMEVKGLSFHVHFRFTSEPHLLLAQIAQKTAKKVYIKRSGK 309
+ S+ K+ R++++E K F VHF+FT+EPH LL+QI Q+ A+KV I+RSGK
Sbjct: 1411 KEKKKVKSELVRKETDRSIFVEAKENHFEVHFKFTNEPHTLLSQIVQRAAQKVSIQRSGK 1470
Query: 308 ISQCRMVQYDPDEKTVIWDDNIKPKRGSQKSDADDATLYWAVKASGVDFKSLWEMADDLD 129
I QC+ + + + + +N+K ++ + + + A++ SGVDFK+LWEM D+LD
Sbjct: 1471 IIQCQQITC-KEGQVIYHGNNLKERKNLKPEEKEKIP---ALQTSGVDFKTLWEMQDELD 1526
Query: 128 LSRLYSNNITSVLNTYGVEAARATLIREVKQVFDIYGVKID 6
+ +YSN+I ++L TYGVEAARAT+IRE++ +F YG+ ++
Sbjct: 1527 VRYIYSNDIHAMLQTYGVEAARATIIREIQNIFTSYGISVN 1567