BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00010361
         (750 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, I...   125   7e-27
gb|ACF06506.1| RNA polymerase [Elaeis guineensis]                     125   1e-26
ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymer...   124   3e-26
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   122   6e-26
gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi...   121   2e-25

>ref|XP_002274208.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           RPABC3 [Vitis vinifera] gi|296084254|emb|CBI24642.3|
           unnamed protein product [Vitis vinifera]
          Length = 145

 Score =  125 bits (315), Expect = 7e-27
 Identities = 64/142 (45%), Positives = 96/142 (67%), Gaps = 1/142 (0%)
 Frame = +3

Query: 66  MADFHFDEIVKVVNVD-SQVVYDKVSRIIAKGEEDDSYLELDVNSELYPMLPGEKYRVVI 242
           M +  FD+I  V   D     +DKVSRI A  E+ D +++LDVN E YP+  GEK+R+V+
Sbjct: 1   MVETFFDDIFVVDGQDPGGKKFDKVSRIEASSEQYDMFMQLDVNIEAYPIQAGEKFRMVL 60

Query: 243 SNNLLMDGSIIPSYFPEGKQKSLADKFEYVMHGVVYKMSQAKESADDGNIDVRVVVYISF 422
           +  L +DG+ +  YF +G+QKSLADKF+YVM+G++YK+S      +    DV+ V+Y SF
Sbjct: 61  APTLHLDGADVTDYFTQGEQKSLADKFDYVMYGIIYKVSN-----EGSGPDVKGVIYASF 115

Query: 423 GGLQLMLKGDPLKMHKFSVDQK 488
           GGL ++LKGDP  ++K  V+++
Sbjct: 116 GGLLMILKGDPSNLNKLEVNKR 137


>gb|ACF06506.1| RNA polymerase [Elaeis guineensis]
          Length = 145

 Score =  125 bits (313), Expect = 1e-26
 Identities = 62/142 (43%), Positives = 96/142 (67%), Gaps = 1/142 (0%)
 Frame = +3

Query: 66  MADFHFDEIVKVVNVDSQ-VVYDKVSRIIAKGEEDDSYLELDVNSELYPMLPGEKYRVVI 242
           M +  F++I  +  +D     +DKVSRI A+ E+ D Y++LDVN+E+YP+  G+K+ +V+
Sbjct: 1   MVELLFEDIFTLTRIDPDGKKFDKVSRIEARSEQFDMYMQLDVNTEIYPLHVGDKFTMVL 60

Query: 243 SNNLLMDGSIIPSYFPEGKQKSLADKFEYVMHGVVYKMSQAKESADDGNIDVRVVVYISF 422
           +  L +DG+    Y+ +G++KSLADKFEYVMHG +YK+S+     +    +V+V +Y SF
Sbjct: 61  APTLSLDGTPDSGYYMQGQRKSLADKFEYVMHGKLYKISE-----ESSGPNVKVEIYASF 115

Query: 423 GGLQLMLKGDPLKMHKFSVDQK 488
           GGL +MLKGDP     F +DQ+
Sbjct: 116 GGLLMMLKGDPSNATNFELDQR 137


>ref|XP_004149143.1| PREDICTED: probable DNA-directed RNA polymerases I, II, and III
           subunit RPABC3-like [Cucumis sativus]
           gi|449509097|ref|XP_004163492.1| PREDICTED: probable
           DNA-directed RNA polymerases I, II, and III subunit
           RPABC3-like [Cucumis sativus]
          Length = 146

 Score =  124 bits (310), Expect = 3e-26
 Identities = 73/143 (51%), Positives = 97/143 (67%), Gaps = 3/143 (2%)
 Frame = +3

Query: 66  MADFHFDEIVKV--VNVDSQVVYDKVSRIIAKGEEDDSYLELDVNSELYPMLPGEKYRVV 239
           MA   F++I KV  VN D +  YDKVSRI A+ E+   ++ LDVN+E+YP+  GEK  +V
Sbjct: 1   MAGLLFNDIFKVKCVNPDGKK-YDKVSRIEARSEKLSMHMLLDVNTEIYPIDEGEKLLMV 59

Query: 240 ISNNLLMDGSIIPSYFPEGKQKSLADKFEYVMHGVVYKMSQAKESADDGN-IDVRVVVYI 416
           +S  L  DGS + SY  +  +KSLADKFEY+MHG  YK+S      D+G+  D++V VY 
Sbjct: 60  LSPTLNYDGSPVTSYKDQEGKKSLADKFEYIMHGKTYKLS------DEGSGSDLKVEVYA 113

Query: 417 SFGGLQLMLKGDPLKMHKFSVDQ 485
           SFGGLQ++LKGDP+   KF VDQ
Sbjct: 114 SFGGLQMLLKGDPIHCAKFRVDQ 136


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  122 bits (307), Expect = 6e-26
 Identities = 62/137 (45%), Positives = 93/137 (67%), Gaps = 1/137 (0%)
 Frame = +3

Query: 81  FDEIVKVVNVDSQ-VVYDKVSRIIAKGEEDDSYLELDVNSELYPMLPGEKYRVVISNNLL 257
           F +I KV+ +D     +DKVSRI A+ E+ D Y++LDVN+E+YPM  GEK+ + +++ L 
Sbjct: 6   FGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSLASTLD 65

Query: 258 MDGSIIPSYFPEGKQKSLADKFEYVMHGVVYKMSQAKESADDGNIDVRVVVYISFGGLQL 437
           +DG+    Y+ +  +KSLADKFEYVMHG +YK+S+     +    +V+ V+Y+SFGGL +
Sbjct: 66  LDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISE-----EGSGPNVKGVIYVSFGGLLM 120

Query: 438 MLKGDPLKMHKFSVDQK 488
           ML GDP    K  +DQ+
Sbjct: 121 MLSGDPANTAKLDLDQR 137


>gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group]
          Length = 215

 Score =  121 bits (303), Expect = 2e-25
 Identities = 61/145 (42%), Positives = 99/145 (68%), Gaps = 1/145 (0%)
 Frame = +3

Query: 57  QTTMADFHFDEIVKVVNVDSQ-VVYDKVSRIIAKGEEDDSYLELDVNSELYPMLPGEKYR 233
           Q  MA+F F++I  V  +D     +D+VSRI A+ ++ D Y++LDV +++YPM PG+++ 
Sbjct: 65  QGGMAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFT 124

Query: 234 VVISNNLLMDGSIIPSYFPEGKQKSLADKFEYVMHGVVYKMSQAKESADDGNIDVRVVVY 413
           +V+   L +DG+   ++F +  +K+LADK+EYVMHG +YK+S+ K+++D      +V +Y
Sbjct: 125 MVLVPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQN--AKKVEMY 182

Query: 414 ISFGGLQLMLKGDPLKMHKFSVDQK 488
            SFGGL +MLKGDP     F +DQ+
Sbjct: 183 ASFGGLLVMLKGDPSSAANFELDQR 207