BLASTX nr result

ID: Scutellaria22_contig00007181 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00007181
         (206 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAC83464.1| eIF3c [Arabidopsis thaliana]                            65   7e-09
ref|NP_191174.1| translation initiation factor eIF-3 subunit 8 [...    65   7e-09
ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arab...    65   7e-09
sp|Q9XHM1.1|EIF3C_MEDTR RecName: Full=Eukaryotic translation ini...    62   5e-08
ref|XP_003592908.1| Eukaryotic translation initiation factor 3 s...    62   5e-08

>gb|AAC83464.1| eIF3c [Arabidopsis thaliana]
          Length = 900

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/56 (58%), Positives = 37/56 (66%)
 Frame = +3

Query: 3   ALAFHLTEKLTILAETNERAFESXXXXXXXXXXXXRRKDGQDYAAAASGGGNRWQD 170
           +LAF LTEKL+ILAE+NERA ES            RR + QDYA AASGGG  WQD
Sbjct: 781 SLAFQLTEKLSILAESNERAMESRTGGGGLDLSSRRRDNNQDYAGAASGGGGYWQD 836


>ref|NP_191174.1| translation initiation factor eIF-3 subunit 8 [Arabidopsis
           thaliana] gi|334186011|ref|NP_001190102.1| translation
           initiation factor eIF-3 subunit 8 [Arabidopsis thaliana]
           gi|23503063|sp|O49160.2|EIF3C_ARATH RecName:
           Full=Eukaryotic translation initiation factor 3 subunit
           C; Short=eIF3c; AltName: Full=Eukaryotic translation
           initiation factor 3 subunit 8; AltName: Full=eIF3 p110;
           AltName: Full=p105 gi|7572913|emb|CAB87414.1| PROBABLE
           EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT 8
           [Arabidopsis thaliana] gi|17381100|gb|AAL36362.1|
           putative eukaryotic translation initiation factor 3
           subunit 8 [Arabidopsis thaliana]
           gi|25054977|gb|AAN71960.1| putative eukaryotic
           translation initiation factor 3 subunit 8 [Arabidopsis
           thaliana] gi|332645965|gb|AEE79486.1| translation
           initiation factor eIF-3 subunit 8 [Arabidopsis thaliana]
           gi|332645966|gb|AEE79487.1| translation initiation
           factor eIF-3 subunit 8 [Arabidopsis thaliana]
          Length = 900

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/56 (58%), Positives = 37/56 (66%)
 Frame = +3

Query: 3   ALAFHLTEKLTILAETNERAFESXXXXXXXXXXXXRRKDGQDYAAAASGGGNRWQD 170
           +LAF LTEKL+ILAE+NERA ES            RR + QDYA AASGGG  WQD
Sbjct: 781 SLAFQLTEKLSILAESNERAMESRTGGGGLDLSSRRRDNNQDYAGAASGGGGYWQD 836


>ref|XP_002878070.1| hypothetical protein ARALYDRAFT_486056 [Arabidopsis lyrata subsp.
           lyrata] gi|297323908|gb|EFH54329.1| hypothetical protein
           ARALYDRAFT_486056 [Arabidopsis lyrata subsp. lyrata]
          Length = 888

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 33/56 (58%), Positives = 37/56 (66%)
 Frame = +3

Query: 3   ALAFHLTEKLTILAETNERAFESXXXXXXXXXXXXRRKDGQDYAAAASGGGNRWQD 170
           +LAF LTEKL+ILAE+NERA ES            RR + QDYA AASGGG  WQD
Sbjct: 769 SLAFQLTEKLSILAESNERAMESRTGGGGLDLSSRRRDNNQDYAGAASGGGGYWQD 824


>sp|Q9XHM1.1|EIF3C_MEDTR RecName: Full=Eukaryotic translation initiation factor 3 subunit C;
           Short=eIF3c; AltName: Full=Eukaryotic translation
           initiation factor 3 subunit 8; AltName: Full=eIF3 p110
           gi|5106926|gb|AAD39891.1|AF106930_1 putative translation
           initiation protein [Medicago truncatula]
          Length = 935

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 6/62 (9%)
 Frame = +3

Query: 3   ALAFHLTEKLTILAETNERAFESXXXXXXXXXXXXRRKDGQDYAAAASGGGN------RW 164
           ALAF LTEKL+ILAE+NERA E+            RR+DGQDYAAAA+GGG+      RW
Sbjct: 801 ALAFQLTEKLSILAESNERATEA-RLGGGGLDLPPRRRDGQDYAAAAAGGGSGTSSGGRW 859

Query: 165 QD 170
           QD
Sbjct: 860 QD 861


>ref|XP_003592908.1| Eukaryotic translation initiation factor 3 subunit C [Medicago
            truncatula] gi|355481956|gb|AES63159.1| Eukaryotic
            translation initiation factor 3 subunit C [Medicago
            truncatula]
          Length = 984

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 36/62 (58%), Positives = 42/62 (67%), Gaps = 6/62 (9%)
 Frame = +3

Query: 3    ALAFHLTEKLTILAETNERAFESXXXXXXXXXXXXRRKDGQDYAAAASGGGN------RW 164
            ALAF LTEKL+ILAE+NERA E+            RR+DGQDYAAAA+GGG+      RW
Sbjct: 850  ALAFQLTEKLSILAESNERATEA-RLGGGGLDLPPRRRDGQDYAAAAAGGGSGTSSGGRW 908

Query: 165  QD 170
            QD
Sbjct: 909  QD 910


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