BLASTX nr result

ID: Scutellaria22_contig00007017 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00007017
         (818 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vit...   288   8e-76
ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like...   282   7e-74
ref|XP_002526350.1| GTP binding protein, putative [Ricinus commu...   265   9e-69
ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp....   248   9e-64
ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like...   243   4e-62

>ref|XP_002277185.1| PREDICTED: ribosome biogenesis GTPase A [Vitis vinifera]
           gi|297744953|emb|CBI38545.3| unnamed protein product
           [Vitis vinifera]
          Length = 369

 Score =  288 bits (738), Expect = 8e-76
 Identities = 144/216 (66%), Positives = 178/216 (82%)
 Frame = +1

Query: 169 IQNIGKAVKAVVKGRSSEWWYTPHMAAASRAIADRIPLVDLVLEVRDARIPLSSECLQLR 348
           I N+ K + + VK R+++ W++PHMAAASRA+++RIPLVDLVLEVRDARIPLSSE  QLR
Sbjct: 3   IANLEKRLGSGVK-RAAKTWFSPHMAAASRAVSERIPLVDLVLEVRDARIPLSSEYDQLR 61

Query: 349 KLPSSSNRIIVLNKMDLANHDQTKEWMKFFKEQKCMAFGVNAHNNENIKEFLTFLQARVR 528
             PSSS RIIVLNKMDLAN  + KEWM++F++Q C++FGVN+HN +NIKE L FLQA+V+
Sbjct: 62  NFPSSSKRIIVLNKMDLANRLEIKEWMRYFEQQNCISFGVNSHNKDNIKECLKFLQAQVK 121

Query: 529 ELKKKDAPDNAITLMLVGIPNVGKSALANSLHLVGRITAAEKGKLRRSVITPHPGETKSI 708
            +KK D      T+MLVGIPNVGKSALANSLH +GRI+AAEKGKL+ + ++P PGET+ I
Sbjct: 122 GVKKIDHSSYTATIMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHATVSPIPGETRDI 181

Query: 709 ISLKIASHPNIYVLDTPGVLPPDVNSYEVCSKLALT 816
            SLKI SHPN+YVLDTPG+LPPD+    VCSKLALT
Sbjct: 182 SSLKIGSHPNVYVLDTPGILPPDILDVVVCSKLALT 217


>ref|XP_004143028.1| PREDICTED: ribosome biogenesis GTPase A-like [Cucumis sativus]
           gi|449482814|ref|XP_004156412.1| PREDICTED: ribosome
           biogenesis GTPase A-like [Cucumis sativus]
          Length = 366

 Score =  282 bits (721), Expect = 7e-74
 Identities = 141/218 (64%), Positives = 171/218 (78%), Gaps = 1/218 (0%)
 Frame = +1

Query: 166 LIQNIGKAVKAVVKG-RSSEWWYTPHMAAASRAIADRIPLVDLVLEVRDARIPLSSECLQ 342
           L++ IG A+  +  G R S  WY  HM AASRA+A+RIPLVD VLEVRDARIP SSE   
Sbjct: 6   LMRKIGTAINQLAAGNRISSGWYDAHMEAASRAVAERIPLVDFVLEVRDARIPTSSEYEM 65

Query: 343 LRKLPSSSNRIIVLNKMDLANHDQTKEWMKFFKEQKCMAFGVNAHNNENIKEFLTFLQAR 522
           ++  P SS RIIVLNK DLA+  QT+ W + F++  C+++GVN+HN ENI+EFL FLQAR
Sbjct: 66  MKNHPPSSKRIIVLNKTDLADQSQTEVWTRHFEDHNCISYGVNSHNKENIREFLNFLQAR 125

Query: 523 VRELKKKDAPDNAITLMLVGIPNVGKSALANSLHLVGRITAAEKGKLRRSVITPHPGETK 702
           VRELKK     +A T+MLVGIPNVGKSALANSLH +GRI+AAEKGKL+ +V++  PGETK
Sbjct: 126 VRELKKSGHSSHATTMMLVGIPNVGKSALANSLHQIGRISAAEKGKLKHAVVSSQPGETK 185

Query: 703 SIISLKIASHPNIYVLDTPGVLPPDVNSYEVCSKLALT 816
           +I SLKIASHPNIYVLDTPG+ PP ++  EVCSKLALT
Sbjct: 186 NISSLKIASHPNIYVLDTPGIFPPKIDDIEVCSKLALT 223


>ref|XP_002526350.1| GTP binding protein, putative [Ricinus communis]
           gi|223534309|gb|EEF36021.1| GTP binding protein,
           putative [Ricinus communis]
          Length = 373

 Score =  265 bits (677), Expect = 9e-69
 Identities = 138/225 (61%), Positives = 164/225 (72%), Gaps = 7/225 (3%)
 Frame = +1

Query: 163 VLIQNIGKAVKAVVKGRSSEWWYTPHMAAASRAIADRIPLVDLVLEVRDARIPLSSECLQ 342
           +L   IGK V    + R   W Y PHMAAAS AIA+RI LVD V+EVRDARIPLSSEC  
Sbjct: 1   MLASEIGKRVMKASRNREQRW-YNPHMAAASSAIAERISLVDFVIEVRDARIPLSSECQL 59

Query: 343 LRKLPSSSNRIIVLNKMDLANHDQTKEWMKFFKEQKCMAFGVNAHNNENIKEFLTFLQAR 522
           L     SS RIIV+NKMDLAN  Q K+W+K+FK++  +++ +N+HN +N+KEFL FLQ +
Sbjct: 60  LTNHSDSSRRIIVMNKMDLANRLQLKDWIKYFKQRGFVSYAINSHNKDNVKEFLNFLQGQ 119

Query: 523 VRELKKKDAPDNAITLMLVGIPNVGKSALANSLHLVGRITAAEKGKLRRSVITPHPGETK 702
           VR LK  D     IT+M+VGIPNVGKSALA SLH +GRI+AAEKGKL+ + +TPHPGETK
Sbjct: 120 VRGLKNIDHSGCTITMMMVGIPNVGKSALAKSLHHIGRISAAEKGKLKHAKVTPHPGETK 179

Query: 703 SIISLK-------IASHPNIYVLDTPGVLPPDVNSYEVCSKLALT 816
            I SLK       I SHPNIYVLDTPGVLPP +   EVC KLALT
Sbjct: 180 DISSLKACSLSLIIGSHPNIYVLDTPGVLPPQIFDAEVCFKLALT 224


>ref|XP_002874640.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297320477|gb|EFH50899.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 373

 Score =  248 bits (634), Expect = 9e-64
 Identities = 126/218 (57%), Positives = 165/218 (75%), Gaps = 1/218 (0%)
 Frame = +1

Query: 166 LIQNIGKAVKAVVKGRSSEWWYTPHMAAASRAIADRIPLVDLVLEVRDARIPLSSECLQL 345
           + + IG AV    +  +  W Y PHMAAA RAI++RIPLVD VLE+RDARIPLSS+   L
Sbjct: 9   IAREIGDAVIKASRNPNRRW-YGPHMAAAVRAISERIPLVDFVLEIRDARIPLSSDYELL 67

Query: 346 RKL-PSSSNRIIVLNKMDLANHDQTKEWMKFFKEQKCMAFGVNAHNNENIKEFLTFLQAR 522
           RK  P  S RIIVLNKM+LA   + K+ + +F+E+K +++ VN+HN E +K+FL FLQ++
Sbjct: 68  RKFSPFPSQRIIVLNKMELAEPLELKKCIDYFEERKYLSYAVNSHNKECVKQFLNFLQSQ 127

Query: 523 VRELKKKDAPDNAITLMLVGIPNVGKSALANSLHLVGRITAAEKGKLRRSVITPHPGETK 702
           VREL K     +  T+ML+GIPN+GKSALANSLH +GRI+AAEKGKL+ + ++  PG+TK
Sbjct: 128 VRELHKAGYSGHTTTMMLLGIPNIGKSALANSLHQIGRISAAEKGKLKHTTVSSQPGDTK 187

Query: 703 SIISLKIASHPNIYVLDTPGVLPPDVNSYEVCSKLALT 816
            I+SLKI SHPN+YVLDTPG+ PP +N  E+CSKLALT
Sbjct: 188 DIMSLKIGSHPNVYVLDTPGIFPPTLNDAEICSKLALT 225


>ref|XP_003532888.1| PREDICTED: ribosome biogenesis GTPase A-like [Glycine max]
          Length = 399

 Score =  243 bits (620), Expect = 4e-62
 Identities = 128/225 (56%), Positives = 158/225 (70%), Gaps = 2/225 (0%)
 Frame = +1

Query: 148 MAVTEVLIQNIGKAVKAVVKGRSSEWWYTPHMAAASRAIADRIPLVDLVLEVRDARIPLS 327
           M+    L + +G   K  ++ R+   W  P  AAASRAIA+RIPL DLV++VRDARIPLS
Sbjct: 23  MSAAARLGRRVGTTAKEELR-RNKGAWRDPLPAAASRAIAERIPLADLVVQVRDARIPLS 81

Query: 328 SECLQLRKLPSSSNRIIVLNKMDLANHDQTKEWMKFFKEQKCMAFGVNAHNNENIKEFLT 507
           SEC  LR  P S  +I+ LNKMDL      K WM +F+E+ C++ GVNAHN ENIK+ L+
Sbjct: 82  SECEILRNYPPSLKQIVALNKMDLVGTSNVKAWMGYFRERNCISCGVNAHNKENIKQLLS 141

Query: 508 FLQARVRELKKKDAPDN--AITLMLVGIPNVGKSALANSLHLVGRITAAEKGKLRRSVIT 681
            +Q RV ELK  D  DN    T+MLVGIPNVGKSAL N+LH VGRI+AAEKGKL+ + ++
Sbjct: 142 LIQRRVSELKGADQCDNNYTATVMLVGIPNVGKSALVNALHQVGRISAAEKGKLKHATVS 201

Query: 682 PHPGETKSIISLKIASHPNIYVLDTPGVLPPDVNSYEVCSKLALT 816
           P PGETK I S KI SHPNIYVLDTP +L P V + ++ SKL LT
Sbjct: 202 PEPGETKDIRSFKIGSHPNIYVLDTPAILSPKVPNVDILSKLILT 246


Top