BLASTX nr result

ID: Scutellaria22_contig00006163 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00006163
         (1141 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI23263.3| unnamed protein product [Vitis vinifera]              334   3e-89
ref|XP_002274688.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   334   3e-89
emb|CAN76636.1| hypothetical protein VITISV_010658 [Vitis vinifera]   334   3e-89
ref|XP_003534303.1| PREDICTED: DEAD-box ATP-dependent RNA helica...   325   1e-86
ref|NP_001237872.1| DEAD-box RNA helicase [Glycine max] gi|22989...   323   5e-86

>emb|CBI23263.3| unnamed protein product [Vitis vinifera]
          Length = 628

 Score =  334 bits (856), Expect = 3e-89
 Identities = 166/213 (77%), Positives = 186/213 (87%), Gaps = 2/213 (0%)
 Frame = -2

Query: 633 DEVRESTG--VVVSGKNVNDSKYKALDSFVESGLPDHVLECCKTFDKPSPIQSHSWPFLL 460
           ++ +ES G  V V+GK+  +SKY A  SF ES LPD VLECC+ F +PSPIQSH+WPFLL
Sbjct: 184 EDDKESRGACVAVTGKDAKESKYAAFKSFAESKLPDDVLECCRNFSQPSPIQSHAWPFLL 243

Query: 459 DGRDFIGIAATGSGKTLAFGIPAIMHVLSKRKSRTSKKVNPICLVLSPTRELAQQISDVL 280
           D RDFIGIAATGSGKTLAFG+PA+MHVLSKRKS+TSK VNP+CLVLSPTRELAQQISDVL
Sbjct: 244 DHRDFIGIAATGSGKTLAFGVPAMMHVLSKRKSKTSKGVNPLCLVLSPTRELAQQISDVL 303

Query: 279 CDAGRPSGVKSVCIYGGTSKGPQISSLKSGVDFVIGCPGRLQDLMEMGVCNLKEVSFVVL 100
           C+AG+  GVKSVC+YGGTSKGPQISSLKSGVD VIG PGRL+DL+EMGVC L EVSFVVL
Sbjct: 304 CEAGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEMGVCCLTEVSFVVL 363

Query: 99  DEADRMLDMGFEPHVRAILSQTCSVHQMLMFSA 1
           DEADRMLDMGFEP VR+ILSQTC   QM+MFSA
Sbjct: 364 DEADRMLDMGFEPEVRSILSQTCPARQMVMFSA 396


>ref|XP_002274688.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5 [Vitis vinifera]
          Length = 549

 Score =  334 bits (856), Expect = 3e-89
 Identities = 166/213 (77%), Positives = 186/213 (87%), Gaps = 2/213 (0%)
 Frame = -2

Query: 633 DEVRESTG--VVVSGKNVNDSKYKALDSFVESGLPDHVLECCKTFDKPSPIQSHSWPFLL 460
           ++ +ES G  V V+GK+  +SKY A  SF ES LPD VLECC+ F +PSPIQSH+WPFLL
Sbjct: 105 EDDKESRGACVAVTGKDAKESKYAAFKSFAESKLPDDVLECCRNFSQPSPIQSHAWPFLL 164

Query: 459 DGRDFIGIAATGSGKTLAFGIPAIMHVLSKRKSRTSKKVNPICLVLSPTRELAQQISDVL 280
           D RDFIGIAATGSGKTLAFG+PA+MHVLSKRKS+TSK VNP+CLVLSPTRELAQQISDVL
Sbjct: 165 DHRDFIGIAATGSGKTLAFGVPAMMHVLSKRKSKTSKGVNPLCLVLSPTRELAQQISDVL 224

Query: 279 CDAGRPSGVKSVCIYGGTSKGPQISSLKSGVDFVIGCPGRLQDLMEMGVCNLKEVSFVVL 100
           C+AG+  GVKSVC+YGGTSKGPQISSLKSGVD VIG PGRL+DL+EMGVC L EVSFVVL
Sbjct: 225 CEAGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEMGVCCLTEVSFVVL 284

Query: 99  DEADRMLDMGFEPHVRAILSQTCSVHQMLMFSA 1
           DEADRMLDMGFEP VR+ILSQTC   QM+MFSA
Sbjct: 285 DEADRMLDMGFEPEVRSILSQTCPARQMVMFSA 317


>emb|CAN76636.1| hypothetical protein VITISV_010658 [Vitis vinifera]
          Length = 539

 Score =  334 bits (856), Expect = 3e-89
 Identities = 166/213 (77%), Positives = 186/213 (87%), Gaps = 2/213 (0%)
 Frame = -2

Query: 633 DEVRESTG--VVVSGKNVNDSKYKALDSFVESGLPDHVLECCKTFDKPSPIQSHSWPFLL 460
           ++ +ES G  V V+GK+  +SKY A  SF ES LPD VLECC+ F +PSPIQSH+WPFLL
Sbjct: 95  EDDKESRGACVAVTGKDAKESKYAAFKSFAESKLPDDVLECCRNFSQPSPIQSHAWPFLL 154

Query: 459 DGRDFIGIAATGSGKTLAFGIPAIMHVLSKRKSRTSKKVNPICLVLSPTRELAQQISDVL 280
           D RDFIGIAATGSGKTLAFG+PA+MHVLSKRKS+TSK VNP+CLVLSPTRELAQQISDVL
Sbjct: 155 DHRDFIGIAATGSGKTLAFGVPAMMHVLSKRKSKTSKGVNPLCLVLSPTRELAQQISDVL 214

Query: 279 CDAGRPSGVKSVCIYGGTSKGPQISSLKSGVDFVIGCPGRLQDLMEMGVCNLKEVSFVVL 100
           C+AG+  GVKSVC+YGGTSKGPQISSLKSGVD VIG PGRL+DL+EMGVC L EVSFVVL
Sbjct: 215 CEAGKHCGVKSVCLYGGTSKGPQISSLKSGVDIVIGTPGRLKDLIEMGVCCLTEVSFVVL 274

Query: 99  DEADRMLDMGFEPHVRAILSQTCSVHQMLMFSA 1
           DEADRMLDMGFEP VR+ILSQTC   QM+MFSA
Sbjct: 275 DEADRMLDMGFEPEVRSILSQTCPARQMVMFSA 307


>ref|XP_003534303.1| PREDICTED: DEAD-box ATP-dependent RNA helicase 5-like [Glycine max]
          Length = 537

 Score =  325 bits (833), Expect = 1e-86
 Identities = 158/211 (74%), Positives = 181/211 (85%)
 Frame = -2

Query: 633 DEVRESTGVVVSGKNVNDSKYKALDSFVESGLPDHVLECCKTFDKPSPIQSHSWPFLLDG 454
           DE      VVV+GKN  D+KY A+ SF +SGLP++VLECCK F KPSPIQS +WPFLLDG
Sbjct: 95  DETVADGSVVVTGKNAGDAKYAAVKSFADSGLPENVLECCKGFQKPSPIQSRAWPFLLDG 154

Query: 453 RDFIGIAATGSGKTLAFGIPAIMHVLSKRKSRTSKKVNPICLVLSPTRELAQQISDVLCD 274
           RD IGIAATGSGKTLAFG+PA+MHVL KRK ++SK  NP+ LVLSPTRELAQQISDV+CD
Sbjct: 155 RDLIGIAATGSGKTLAFGLPAVMHVLGKRKGKSSKGRNPLGLVLSPTRELAQQISDVMCD 214

Query: 273 AGRPSGVKSVCIYGGTSKGPQISSLKSGVDFVIGCPGRLQDLMEMGVCNLKEVSFVVLDE 94
           AGR  GV+S+C+YGGTSKGPQISSLKSG+D +IG PGR+QDL+EMG+C LKEVSFVVLDE
Sbjct: 215 AGRSCGVQSICLYGGTSKGPQISSLKSGIDIIIGTPGRIQDLIEMGICCLKEVSFVVLDE 274

Query: 93  ADRMLDMGFEPHVRAILSQTCSVHQMLMFSA 1
           ADRMLDMGFE  VR+IL QTCS  QM+MFSA
Sbjct: 275 ADRMLDMGFEQIVRSILGQTCSDRQMVMFSA 305


>ref|NP_001237872.1| DEAD-box RNA helicase [Glycine max] gi|229893773|gb|ACQ90244.1|
           DEAD-box RNA helicase [Glycine max]
          Length = 537

 Score =  323 bits (828), Expect = 5e-86
 Identities = 161/220 (73%), Positives = 184/220 (83%), Gaps = 4/220 (1%)
 Frame = -2

Query: 648 NKNAVDEVRESTG----VVVSGKNVNDSKYKALDSFVESGLPDHVLECCKTFDKPSPIQS 481
           N N     RE T     VVV+G N  ++KY A+ SF +SGLP++VLECCK F+KPSPIQS
Sbjct: 86  NNNGNGANREETATDGSVVVTGNNAGEAKYAAVKSFADSGLPENVLECCKGFEKPSPIQS 145

Query: 480 HSWPFLLDGRDFIGIAATGSGKTLAFGIPAIMHVLSKRKSRTSKKVNPICLVLSPTRELA 301
            +WPFLLDGRD IGIAATGSGKTLAFGIPA+MHVL KRK ++SK  NP+ LVLSPTRELA
Sbjct: 146 RAWPFLLDGRDLIGIAATGSGKTLAFGIPAVMHVLGKRKGKSSKGRNPLGLVLSPTRELA 205

Query: 300 QQISDVLCDAGRPSGVKSVCIYGGTSKGPQISSLKSGVDFVIGCPGRLQDLMEMGVCNLK 121
           QQISDV+CDAGR  GV+S+C+YGGTSKGPQISSLKSG+D VIG PGR+QDL+EMG+C LK
Sbjct: 206 QQISDVMCDAGRSCGVQSICLYGGTSKGPQISSLKSGIDIVIGTPGRIQDLIEMGICCLK 265

Query: 120 EVSFVVLDEADRMLDMGFEPHVRAILSQTCSVHQMLMFSA 1
           EVSFVVLDEADRMLDMGFE  VR+IL QTCS  QM+MFSA
Sbjct: 266 EVSFVVLDEADRMLDMGFEQIVRSILGQTCSDRQMVMFSA 305


Top