BLASTX nr result

ID: Scutellaria22_contig00004464 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00004464
         (1261 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI28691.3| unnamed protein product [Vitis vinifera]              332   1e-88
ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|2...   329   8e-88
gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]      329   1e-87
ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloro...   324   3e-86
ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloro...   322   1e-85

>emb|CBI28691.3| unnamed protein product [Vitis vinifera]
          Length = 274

 Score =  332 bits (851), Expect = 1e-88
 Identities = 173/274 (63%), Positives = 211/274 (77%), Gaps = 12/274 (4%)
 Frame = +3

Query: 96  MATSFSPASHVRS------------FCYAPNTRLSLPDFGNVGCWGASANYVKLQVAVKG 239
           MA +FSPA+ VR+            +C  P       + G      ++ANYV+L    + 
Sbjct: 1   MAMTFSPATPVRTIFQRKSLSPGGCYCRGPGYEKCHLNIGIAFTLRSAANYVRLGDGARE 60

Query: 240 LSGRPLVVKHTWKKRMGVLRCATXXXXXXXXXXXXXDAKERMEKTIESMKSSFNSIRTGR 419
            SG+  V K  ++KR G+ RCAT             D KERMEKTIE+++++FNSIRTGR
Sbjct: 61  YSGKLFVAKRNFQKRTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNSIRTGR 120

Query: 420 ANPSILDKIEVEYYGTPVILKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVNSDTGLTP 599
           ANP+ILD++EVEYYGTPV LKSIAQISTPD++SLLVQPYDKSSLK IEKAIV+SD GLTP
Sbjct: 121 ANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAIVSSDLGLTP 180

Query: 600 NNDGDVIRLTLPQLTSERRKELSKIVAKQAEEGKVAIRNIRRDAIKSYDKLQKEKKLSED 779
           NNDG+VIRL+LPQLTSERRKELSK+VAKQ EEGKVA+RNIRRDA+K+Y+KL+K+KKLSED
Sbjct: 181 NNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDALKAYEKLEKDKKLSED 240

Query: 780 NVKDLSADLQKMTDEYMKKIDTVYKQKEKEVLTV 881
           NVKDLS+DLQK+ DEYMKKI+T+YKQKEKE+L V
Sbjct: 241 NVKDLSSDLQKLIDEYMKKIETIYKQKEKELLKV 274


>ref|XP_002302112.1| predicted protein [Populus trichocarpa] gi|222843838|gb|EEE81385.1|
           predicted protein [Populus trichocarpa]
          Length = 286

 Score =  329 bits (844), Expect = 8e-88
 Identities = 173/264 (65%), Positives = 206/264 (78%)
 Frame = +3

Query: 90  VSMATSFSPASHVRSFCYAPNTRLSLPDFGNVGCWGASANYVKLQVAVKGLSGRPLVVKH 269
           +S+  SF    H    CY      S      V  W +SANY  L+     LSG+P+ VK 
Sbjct: 29  LSLTGSFHRGPHRAKVCYNSIGATS------VSLWSSSANYSSLRNGSTKLSGKPVAVKR 82

Query: 270 TWKKRMGVLRCATXXXXXXXXXXXXXDAKERMEKTIESMKSSFNSIRTGRANPSILDKIE 449
             + R GV+R AT             DAK RMEKTI++M+++FNS+RTGRANPS+LDKIE
Sbjct: 83  LLQNRRGVVRNATIEEIEAEKSLIEDDAKGRMEKTIDTMRANFNSVRTGRANPSMLDKIE 142

Query: 450 VEYYGTPVILKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVNSDTGLTPNNDGDVIRLT 629
           VEYYGTPV LKSIAQISTPDASSLLVQPYDKSSLKAIEKAIV+SD GLTPNNDG+VIR++
Sbjct: 143 VEYYGTPVSLKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVSSDLGLTPNNDGEVIRMS 202

Query: 630 LPQLTSERRKELSKIVAKQAEEGKVAIRNIRRDAIKSYDKLQKEKKLSEDNVKDLSADLQ 809
           +PQLTSERRKELSK+VAK AEEGKVA+RNIRRDA+K+Y+KL+KEKKLSEDNVKDLS+DLQ
Sbjct: 203 IPQLTSERRKELSKMVAKLAEEGKVALRNIRRDALKAYEKLEKEKKLSEDNVKDLSSDLQ 262

Query: 810 KMTDEYMKKIDTVYKQKEKEVLTV 881
           K+TDEYMKK++ ++KQKEKE+L V
Sbjct: 263 KLTDEYMKKLENIFKQKEKELLKV 286


>gb|ABK96574.1| unknown [Populus trichocarpa x Populus deltoides]
          Length = 286

 Score =  329 bits (843), Expect = 1e-87
 Identities = 167/234 (71%), Positives = 198/234 (84%)
 Frame = +3

Query: 180 NVGCWGASANYVKLQVAVKGLSGRPLVVKHTWKKRMGVLRCATXXXXXXXXXXXXXDAKE 359
           +V  W +SANY  L+     LSG+P+ VK   + R GV+R AT             DAK 
Sbjct: 53  SVSLWSSSANYSSLRNGSSKLSGKPVAVKRLLQNRRGVVRNATIEEIEAEKSLIEDDAKG 112

Query: 360 RMEKTIESMKSSFNSIRTGRANPSILDKIEVEYYGTPVILKSIAQISTPDASSLLVQPYD 539
           RMEKTI++M+++FNS+RTGRANPS+LDKIEVEYYGTPV LKSIAQISTPDASSLLVQPYD
Sbjct: 113 RMEKTIDTMRTNFNSVRTGRANPSMLDKIEVEYYGTPVSLKSIAQISTPDASSLLVQPYD 172

Query: 540 KSSLKAIEKAIVNSDTGLTPNNDGDVIRLTLPQLTSERRKELSKIVAKQAEEGKVAIRNI 719
           KSSLKAIEKAIV+SD GLTPNNDG+VIR+++PQLTSERRKELSK+VAK AEEGKVA+RNI
Sbjct: 173 KSSLKAIEKAIVSSDLGLTPNNDGEVIRMSIPQLTSERRKELSKMVAKLAEEGKVALRNI 232

Query: 720 RRDAIKSYDKLQKEKKLSEDNVKDLSADLQKMTDEYMKKIDTVYKQKEKEVLTV 881
           RRDA+K+Y+KL+KEKKLSEDNVKDLS+DLQK+TDEYMKK+D ++KQKEKE+L V
Sbjct: 233 RRDALKAYEKLEKEKKLSEDNVKDLSSDLQKLTDEYMKKLDNIFKQKEKELLKV 286


>ref|XP_004140097.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Cucumis
           sativus]
          Length = 278

 Score =  324 bits (831), Expect = 3e-86
 Identities = 175/278 (62%), Positives = 213/278 (76%), Gaps = 16/278 (5%)
 Frame = +3

Query: 96  MATSFSPASHVRSFCYA---PNTRLSLPDF-GNVGC------------WGASANYVKLQV 227
           MAT FS  + +R   +    P + LSL D+ G + C            W +++NYV+L  
Sbjct: 1   MATPFSATASIRRSLFQNPPPKSLLSLRDYNGGLNCVKCGSITAHLCSWKSASNYVRLNR 60

Query: 228 AVKGLSGRPLVVKHTWKKRMGVLRCATXXXXXXXXXXXXXDAKERMEKTIESMKSSFNSI 407
               +S +  V  + +K R  V+R AT             D K RMEKTI++++S+FNSI
Sbjct: 61  QALVISTQLSVSGNVFKNRRLVVRAATIEEIEAEKTLIEKDVKARMEKTIDTVRSNFNSI 120

Query: 408 RTGRANPSILDKIEVEYYGTPVILKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVNSDT 587
           RTGR+NP++LDKIEVEYYG+PV LKSIAQISTPDASSLLVQPYDKSSLK+IEKAIVNSD 
Sbjct: 121 RTGRSNPAMLDKIEVEYYGSPVSLKSIAQISTPDASSLLVQPYDKSSLKSIEKAIVNSDL 180

Query: 588 GLTPNNDGDVIRLTLPQLTSERRKELSKIVAKQAEEGKVAIRNIRRDAIKSYDKLQKEKK 767
           G+TPNNDG+VIRLTLPQLTSERRKELSK+VAKQAEEGKVA+RNIRRDA+K+Y+KL+KEKK
Sbjct: 181 GMTPNNDGEVIRLTLPQLTSERRKELSKVVAKQAEEGKVAVRNIRRDALKAYEKLEKEKK 240

Query: 768 LSEDNVKDLSADLQKMTDEYMKKIDTVYKQKEKEVLTV 881
           LSEDNVKDLS+DLQK+TD+YMKKID +YKQKEKE+L V
Sbjct: 241 LSEDNVKDLSSDLQKLTDDYMKKIDVLYKQKEKELLKV 278


>ref|XP_002272648.1| PREDICTED: ribosome-recycling factor, chloroplastic-like [Vitis
           vinifera]
          Length = 280

 Score =  322 bits (825), Expect = 1e-85
 Identities = 171/279 (61%), Positives = 209/279 (74%), Gaps = 20/279 (7%)
 Frame = +3

Query: 105 SFSPASHVRS------------FCYAPNTRLSLPDFGNVGCWGASANYVKLQVAVKGLSG 248
           +FSPA+ VR+            +C  P       + G      ++ANYV+L    +  SG
Sbjct: 2   TFSPATPVRTIFQRKSLSPGGCYCRGPGYEKCHLNIGIAFTLRSAANYVRLGDGAREYSG 61

Query: 249 RPLVVKHTWKKRM--------GVLRCATXXXXXXXXXXXXXDAKERMEKTIESMKSSFNS 404
           +  V K  ++KR         G+ RCAT             D KERMEKTIE+++++FNS
Sbjct: 62  KLFVAKRNFQKRQVESYGYKTGIFRCATIEEIEAEKSSIEKDVKERMEKTIETVRTNFNS 121

Query: 405 IRTGRANPSILDKIEVEYYGTPVILKSIAQISTPDASSLLVQPYDKSSLKAIEKAIVNSD 584
           IRTGRANP+ILD++EVEYYGTPV LKSIAQISTPD++SLLVQPYDKSSLK IEKAIV+SD
Sbjct: 122 IRTGRANPAILDRVEVEYYGTPVSLKSIAQISTPDSASLLVQPYDKSSLKVIEKAIVSSD 181

Query: 585 TGLTPNNDGDVIRLTLPQLTSERRKELSKIVAKQAEEGKVAIRNIRRDAIKSYDKLQKEK 764
            GLTPNNDG+VIRL+LPQLTSERRKELSK+VAKQ EEGKVA+RNIRRDA+K+Y+KL+K+K
Sbjct: 182 LGLTPNNDGEVIRLSLPQLTSERRKELSKVVAKQTEEGKVALRNIRRDALKAYEKLEKDK 241

Query: 765 KLSEDNVKDLSADLQKMTDEYMKKIDTVYKQKEKEVLTV 881
           KLSEDNVKDLS+DLQK+ DEYMKKI+T+YKQKEKE+L V
Sbjct: 242 KLSEDNVKDLSSDLQKLIDEYMKKIETIYKQKEKELLKV 280


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