BLASTX nr result

ID: Scutellaria22_contig00004230 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00004230
         (666 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002887588.1| EMB2184 [Arabidopsis lyrata subsp. lyrata] g...   159   4e-37
ref|XP_002510420.1| 50S ribosomal protein L31, putative [Ricinus...   158   8e-37
ref|NP_565109.1| 50S ribosomal protein L31 [Arabidopsis thaliana...   157   1e-36
ref|XP_002281680.1| PREDICTED: 50S ribosomal protein L31, chloro...   157   2e-36
emb|CAN64555.1| hypothetical protein VITISV_040159 [Vitis vinifera]   157   2e-36

>ref|XP_002887588.1| EMB2184 [Arabidopsis lyrata subsp. lyrata]
           gi|297333429|gb|EFH63847.1| EMB2184 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 145

 Score =  159 bits (403), Expect = 4e-37
 Identities = 71/86 (82%), Positives = 81/86 (94%)
 Frame = -1

Query: 516 SCRKKDIHPEFHEDARVYCNSELVMTTGGTKQEYVVDVWSGNHPFYLGSRSQNLIDADQV 337
           +CRKKD+HPEFHEDA+VYCN ELVMTTGGTK+EYVVDVWSGNHPFYLG+RS  ++DADQV
Sbjct: 47  TCRKKDLHPEFHEDAKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQV 106

Query: 336 EKFRKKFSGLDSIMEIPVLKGEIVLP 259
           EKFRK+F+GL  IMEIPVLKGEIV+P
Sbjct: 107 EKFRKRFAGLSEIMEIPVLKGEIVMP 132


>ref|XP_002510420.1| 50S ribosomal protein L31, putative [Ricinus communis]
           gi|223551121|gb|EEF52607.1| 50S ribosomal protein L31,
           putative [Ricinus communis]
          Length = 134

 Score =  158 bits (400), Expect = 8e-37
 Identities = 76/100 (76%), Positives = 85/100 (85%), Gaps = 1/100 (1%)
 Frame = -1

Query: 555 KVKGVVGSN-QMRWSCRKKDIHPEFHEDARVYCNSELVMTTGGTKQEYVVDVWSGNHPFY 379
           KVK     N  ++ +CRKKDIHPEFHEDA+VYCN ELVMTTGGT++EYVVDVWSGNHPFY
Sbjct: 24  KVKASAVRNFNLQVTCRKKDIHPEFHEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHPFY 83

Query: 378 LGSRSQNLIDADQVEKFRKKFSGLDSIMEIPVLKGEIVLP 259
           LG+RS  L+DADQVEKFRKKF  L  IMEIPVLKGEI+LP
Sbjct: 84  LGNRSAVLVDADQVEKFRKKFGELSQIMEIPVLKGEIILP 123


>ref|NP_565109.1| 50S ribosomal protein L31 [Arabidopsis thaliana]
           gi|75172893|sp|Q9FWS4.1|RK31_ARATH RecName: Full=50S
           ribosomal protein L31, chloroplastic; AltName:
           Full=CL31; AltName: Full=Protein EMBRYO DEFECTIVE 2184;
           Flags: Precursor gi|189096149|pdb|3BBO|1 Chain 1,
           Homology Model For The Spinach Chloroplast 50s Subunit
           Fitted To 9.4a Cryo-Em Map Of The 70s Chlororibosome
           gi|10120448|gb|AAG13073.1|AC023754_11 Unknown protein
           [Arabidopsis thaliana]
           gi|13877927|gb|AAK44041.1|AF370226_1 putative
           chloroplast 50S ribosomal protein L31 [Arabidopsis
           thaliana] gi|16323460|gb|AAL15224.1| putative
           chloroplast 50S ribosomal protein L31 [Arabidopsis
           thaliana] gi|21593299|gb|AAM65248.1| chloroplast 50S
           ribosomal protein L31, putative [Arabidopsis thaliana]
           gi|332197584|gb|AEE35705.1| 50S ribosomal protein L31
           [Arabidopsis thaliana]
          Length = 144

 Score =  157 bits (398), Expect = 1e-36
 Identities = 69/86 (80%), Positives = 81/86 (94%)
 Frame = -1

Query: 516 SCRKKDIHPEFHEDARVYCNSELVMTTGGTKQEYVVDVWSGNHPFYLGSRSQNLIDADQV 337
           +CRKK++HPEFHEDA+VYCN ELVMTTGGTK+EYVVDVWSGNHPFYLG+RS  ++DADQV
Sbjct: 47  TCRKKELHPEFHEDAKVYCNGELVMTTGGTKKEYVVDVWSGNHPFYLGNRSALMVDADQV 106

Query: 336 EKFRKKFSGLDSIMEIPVLKGEIVLP 259
           EKFRK+F+GL  IMEIPVLKGEI++P
Sbjct: 107 EKFRKRFAGLSEIMEIPVLKGEIIMP 132


>ref|XP_002281680.1| PREDICTED: 50S ribosomal protein L31, chloroplastic isoform 1
           [Vitis vinifera] gi|359492152|ref|XP_003634370.1|
           PREDICTED: 50S ribosomal protein L31, chloroplastic
           isoform 2 [Vitis vinifera] gi|302142528|emb|CBI19731.3|
           unnamed protein product [Vitis vinifera]
          Length = 135

 Score =  157 bits (396), Expect = 2e-36
 Identities = 74/101 (73%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
 Frame = -1

Query: 555 KVKGVVGSNQMRWSCRKKDIHPEFHEDARVYCNSELVMTTGGTKQEYVVDVWSGNHPFYL 376
           K    V + + +W+CRKKDIHP+F+EDA+VYCN ELVMTTGGT++EYVVDVWSGNHPFYL
Sbjct: 22  KKANAVRAYRPQWTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHPFYL 81

Query: 375 GSRSQNLIDADQVEKFRKKFSGLDSIMEIPVLK-GEIVLPP 256
           G+RS  L+DADQVEKFRKKF  +  IMEIPVLK GEIVLPP
Sbjct: 82  GNRSGLLVDADQVEKFRKKFGEISQIMEIPVLKYGEIVLPP 122


>emb|CAN64555.1| hypothetical protein VITISV_040159 [Vitis vinifera]
          Length = 241

 Score =  157 bits (396), Expect = 2e-36
 Identities = 74/101 (73%), Positives = 86/101 (85%), Gaps = 1/101 (0%)
 Frame = -1

Query: 555 KVKGVVGSNQMRWSCRKKDIHPEFHEDARVYCNSELVMTTGGTKQEYVVDVWSGNHPFYL 376
           K    V + + +W+CRKKDIHP+F+EDA+VYCN ELVMTTGGT++EYVVDVWSGNHPFYL
Sbjct: 22  KKANAVRAYRPQWTCRKKDIHPQFYEDAKVYCNGELVMTTGGTQKEYVVDVWSGNHPFYL 81

Query: 375 GSRSQNLIDADQVEKFRKKFSGLDSIMEIPVLK-GEIVLPP 256
           G+RS  L+DADQVEKFRKKF  +  IMEIPVLK GEIVLPP
Sbjct: 82  GNRSGLLVDADQVEKFRKKFGEISQIMEIPVLKYGEIVLPP 122


Top