BLASTX nr result

ID: Scutellaria22_contig00004172 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00004172
         (434 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein lig...   189   3e-46
emb|CBI30505.3| unnamed protein product [Vitis vinifera]              189   3e-46
ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein lig...   187   8e-46
ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ...   185   3e-45
emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]   185   4e-45

>ref|XP_002271900.2| PREDICTED: probable E3 ubiquitin-protein ligase HERC3-like isoform
           1 [Vitis vinifera]
          Length = 514

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/143 (62%), Positives = 104/143 (72%)
 Frame = +2

Query: 5   GYFPGVTAQRSPLTSPAIVQFPEAEVAGDSWNDVCPGGCGFGMALSASGKLITWGSADDQ 184
           GY PG + Q SPL SP  V  P + ++ DSW DVC GGCGF +A+S SGKLITWGS DD 
Sbjct: 39  GYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVCGGGCGFAVAISESGKLITWGSEDDL 98

Query: 185 GQSYLTSGKHGENPEVYPLSTADPIVKAAAGWAHCVSVTDKGEVYAWGWKECVPSVKIGR 364
           GQSYLTSG+HGE PE +PL T  PIVKAAAGWAHCVS+TDKGE Y WGWKECVPS K+  
Sbjct: 99  GQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGKVLL 158

Query: 365 SWTSVKTCEDETATKQSSTMTEE 433
             T V+  E ++  KQS   TE+
Sbjct: 159 DSTGVR-FEKDSFGKQSLLQTEQ 180


>emb|CBI30505.3| unnamed protein product [Vitis vinifera]
          Length = 478

 Score =  189 bits (479), Expect = 3e-46
 Identities = 90/143 (62%), Positives = 104/143 (72%)
 Frame = +2

Query: 5   GYFPGVTAQRSPLTSPAIVQFPEAEVAGDSWNDVCPGGCGFGMALSASGKLITWGSADDQ 184
           GY PG + Q SPL SP  V  P + ++ DSW DVC GGCGF +A+S SGKLITWGS DD 
Sbjct: 3   GYLPGASLQGSPLLSPVPVALPTSTLSEDSWKDVCGGGCGFAVAISESGKLITWGSEDDL 62

Query: 185 GQSYLTSGKHGENPEVYPLSTADPIVKAAAGWAHCVSVTDKGEVYAWGWKECVPSVKIGR 364
           GQSYLTSG+HGE PE +PL T  PIVKAAAGWAHCVS+TDKGE Y WGWKECVPS K+  
Sbjct: 63  GQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGKVLL 122

Query: 365 SWTSVKTCEDETATKQSSTMTEE 433
             T V+  E ++  KQS   TE+
Sbjct: 123 DSTGVR-FEKDSFGKQSLLQTEQ 144


>ref|XP_003551498.1| PREDICTED: probable E3 ubiquitin-protein ligase HERC1-like [Glycine
           max]
          Length = 525

 Score =  187 bits (475), Expect = 8e-46
 Identities = 85/143 (59%), Positives = 106/143 (74%)
 Frame = +2

Query: 5   GYFPGVTAQRSPLTSPAIVQFPEAEVAGDSWNDVCPGGCGFGMALSASGKLITWGSADDQ 184
           GY PG + ++SP+ SPA V   +  +A DSW DVC GGCGF M +S  GKLITWGSADD+
Sbjct: 68  GYLPGASPEKSPILSPAPVTLSDPSLAVDSWKDVCGGGCGFAMVISEKGKLITWGSADDE 127

Query: 185 GQSYLTSGKHGENPEVYPLSTADPIVKAAAGWAHCVSVTDKGEVYAWGWKECVPSVKIGR 364
           GQSYL SGKHGE P +Y L T   +VKAAAGWAHC SVT++GEVYAWGWKECVPS K+  
Sbjct: 128 GQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVTEEGEVYAWGWKECVPSGKVIT 187

Query: 365 SWTSVKTCEDETATKQSSTMTEE 433
            + +V + + + A KQSS++ E+
Sbjct: 188 DFITVGSLQKDIAGKQSSSIAEQ 210


>ref|XP_003530222.1| PREDICTED: LOW QUALITY PROTEIN: probable E3 ubiquitin-protein
           ligase HERC3-like [Glycine max]
          Length = 528

 Score =  185 bits (470), Expect = 3e-45
 Identities = 84/138 (60%), Positives = 102/138 (73%)
 Frame = +2

Query: 5   GYFPGVTAQRSPLTSPAIVQFPEAEVAGDSWNDVCPGGCGFGMALSASGKLITWGSADDQ 184
           GY PG + ++SP+ SPA V   +  +AGDSW DVC GGCGF MA+S  GKLITWGSADD+
Sbjct: 68  GYLPGASPEKSPILSPAPVNLSDRSLAGDSWKDVCGGGCGFAMAISEKGKLITWGSADDE 127

Query: 185 GQSYLTSGKHGENPEVYPLSTADPIVKAAAGWAHCVSVTDKGEVYAWGWKECVPSVKIGR 364
           GQSYL SGKHGE P +Y L T   +VKAAAGWAHC SV ++GEVYAWGWKECVPS K+  
Sbjct: 128 GQSYLISGKHGEIPGLYQLPTEASVVKAAAGWAHCASVNEEGEVYAWGWKECVPSGKVIT 187

Query: 365 SWTSVKTCEDETATKQSS 418
            + +V + + + A KQ S
Sbjct: 188 DFITVGSFQKDVAGKQRS 205


>emb|CAN69973.1| hypothetical protein VITISV_001453 [Vitis vinifera]
          Length = 498

 Score =  185 bits (469), Expect = 4e-45
 Identities = 85/135 (62%), Positives = 97/135 (71%)
 Frame = +2

Query: 5   GYFPGVTAQRSPLTSPAIVQFPEAEVAGDSWNDVCPGGCGFGMALSASGKLITWGSADDQ 184
           GY PG + Q SPL SP  V  P + ++ DSW DVC GGCGF +A+S SGKLITWGS DD 
Sbjct: 12  GYLPGASLQGSPLLSPVPVALPASTLSEDSWKDVCGGGCGFAVAISESGKLITWGSEDDL 71

Query: 185 GQSYLTSGKHGENPEVYPLSTADPIVKAAAGWAHCVSVTDKGEVYAWGWKECVPSVKIGR 364
           GQSYLTSG+HGE PE +PL T  PIVKAAAGWAHCVS+TDKGE Y WGWKECVPS K+  
Sbjct: 72  GQSYLTSGQHGETPEPFPLPTEAPIVKAAAGWAHCVSLTDKGEAYTWGWKECVPSGKVLL 131

Query: 365 SWTSVKTCEDETATK 409
             T     + E  T+
Sbjct: 132 DSTGTNVAKPELDTE 146


Top