BLASTX nr result

ID: Scutellaria22_contig00002782 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00002782
         (1055 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFP74112.1| poly-A binding protein, partial [Nicotiana bentha...   264   2e-68
gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana taba...   263   4e-68
ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-l...   263   7e-68
ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp....   259   8e-67
ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-l...   258   2e-66

>gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
          Length = 643

 Score =  264 bits (675), Expect = 2e-68
 Identities = 139/211 (65%), Positives = 158/211 (74%)
 Frame = +2

Query: 422  FVTSLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFANPQDAEKA 601
            FVTSLYVGDLDVNVTDSQLYDLF+Q+G VVSVRVCRDLTS+RSLGYGYVN+ NPQDA +A
Sbjct: 25   FVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARA 84

Query: 602  LMELNFTPLNGKDIRIMYSHRDPSVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 781
            L  LNFTPL+GK IRIMYS+RDP++R                                  
Sbjct: 85   LEVLNFTPLHGKPIRIMYSNRDPTIR-----------RSGNGNIFIKNLDKAIDHKALHD 133

Query: 782  XXXXXXXXLSCKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVYVGPFLRK 961
                    LSCKVA +SSGQS GYGFVQY S+E+AQKAIEKLNGMLLN KQVYVGPF+RK
Sbjct: 134  TFSAFGNILSCKVAVDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRK 193

Query: 962  QERDMSVDKTKFTNVFVKNISESTTDEDLQK 1054
            QERDM+VDKT+FTNVFVKN+SEST +E+L+K
Sbjct: 194  QERDMAVDKTRFTNVFVKNLSESTLEEELRK 224



 Score = 80.1 bits (196), Expect = 8e-13
 Identities = 58/220 (26%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
 Frame = +2

Query: 431  SLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFANPQDAEKALME 610
            ++++ +LD  +    L+D FS  G+++S +V  D +S +S GYG+V + + + A+KA+ +
Sbjct: 116  NIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVD-SSGQSKGYGFVQYDSDEAAQKAIEK 174

Query: 611  LNFTPLNGKDIRIMYSHRDPSVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 790
            LN   LN K + +      P VR                                     
Sbjct: 175  LNGMLLNDKQVYV-----GPFVRKQERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEF 229

Query: 791  XXXXXLSCKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVYVGPFLRKQER 970
                  S  V  +  G+S  +GFV + + E A +A+E LNG  L+ K  +VG   +K ER
Sbjct: 230  GTIT--SVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSER 287

Query: 971  DM------------SVDKTKFTNVFVKNISESTTDEDLQK 1054
            +M            +VDK++  N+++KN+ +S +D+ L++
Sbjct: 288  EMELKHRFEQSAQEAVDKSQGLNLYLKNLDDSISDDKLKE 327


>gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
          Length = 649

 Score =  263 bits (673), Expect = 4e-68
 Identities = 139/211 (65%), Positives = 157/211 (74%)
 Frame = +2

Query: 422  FVTSLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFANPQDAEKA 601
            FVTSLYVGDLDVNVTDSQLYDLF+Q+G VVSVRVCRDLTS+RSLGYGYVN+ NPQDA +A
Sbjct: 25   FVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARA 84

Query: 602  LMELNFTPLNGKDIRIMYSHRDPSVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 781
            L  LNFTPL+GK IRIMYS+RDP++R                                  
Sbjct: 85   LEVLNFTPLHGKPIRIMYSNRDPTIR-----------RSGNGNIFIKNLDKAIDHKALHD 133

Query: 782  XXXXXXXXLSCKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVYVGPFLRK 961
                    LSCKVA +SSGQS GYGFVQY SEE+AQKAIEKLNGMLLN KQVYVGPF+RK
Sbjct: 134  TFSAFGNILSCKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGPFVRK 193

Query: 962  QERDMSVDKTKFTNVFVKNISESTTDEDLQK 1054
             ERDM+VDKT+FTNVFVKN+SEST +E+L+K
Sbjct: 194  HERDMAVDKTRFTNVFVKNLSESTLEEELRK 224



 Score = 82.0 bits (201), Expect = 2e-13
 Identities = 59/220 (26%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
 Frame = +2

Query: 431  SLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFANPQDAEKALME 610
            ++++ +LD  +    L+D FS  G+++S +V  D +S +S GYG+V + + + A+KA+ +
Sbjct: 116  NIFIKNLDKAIDHKALHDTFSAFGNILSCKVAVD-SSGQSKGYGFVQYDSEEAAQKAIEK 174

Query: 611  LNFTPLNGKDIRIMYSHRDPSVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 790
            LN   LN K + +      P VR                                     
Sbjct: 175  LNGMLLNDKQVYV-----GPFVRKHERDMAVDKTRFTNVFVKNLSESTLEEELRKIFGEF 229

Query: 791  XXXXXLSCKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVYVGPFLRKQER 970
                  S  V  +  G+S  +GFV + + E A +A+E LNG  L+ K  +VG   +K ER
Sbjct: 230  GAIT--SVAVMKDEDGKSRCFGFVNFENAEDAARAVEALNGYKLDNKDWFVGRAQKKSER 287

Query: 971  DM------------SVDKTKFTNVFVKNISESTTDEDLQK 1054
            +M            +VDK++  N+++KN+ +S +DE L++
Sbjct: 288  EMELKHRFEQSAKEAVDKSQGLNLYIKNLDDSISDEKLKE 327


>ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 654

 Score =  263 bits (671), Expect = 7e-68
 Identities = 141/218 (64%), Positives = 160/218 (73%), Gaps = 1/218 (0%)
 Frame = +2

Query: 404  SSGGAPFVT-SLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFAN 580
            ++GGA FVT SLYVGDLD+NVTDSQLYD+F+Q+G VVSVRVCRDLT+RRSLGYGYVN++N
Sbjct: 20   ANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSN 79

Query: 581  PQDAEKALMELNFTPLNGKDIRIMYSHRDPSVRXXXXXXXXXXXXXXXXXXXXXXXXXXX 760
            PQDA +AL  LNFTPLNGK IR+MYSHRDPS+R                           
Sbjct: 80   PQDAARALDVLNFTPLNGKPIRVMYSHRDPSIR-----------KSGAGNIFIKNLDKAI 128

Query: 761  XXXXXXXXXXXXXXXLSCKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVY 940
                           LSCKVA +SSGQS GYGFVQ+ +EESA KAIEKLNGMLLN KQVY
Sbjct: 129  DHKALHDTFSAFGSILSCKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVY 188

Query: 941  VGPFLRKQERDMSVDKTKFTNVFVKNISESTTDEDLQK 1054
            VGPFLRKQERD  VDK+KF NVFVKN+SE+TT+EDL K
Sbjct: 189  VGPFLRKQERDGVVDKSKFNNVFVKNLSETTTEEDLNK 226


>ref|XP_002869174.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
            gi|297315010|gb|EFH45433.1| predicted protein
            [Arabidopsis lyrata subsp. lyrata]
          Length = 625

 Score =  259 bits (662), Expect = 8e-67
 Identities = 139/220 (63%), Positives = 157/220 (71%), Gaps = 4/220 (1%)
 Frame = +2

Query: 404  SSGGAPFV----TSLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVN 571
            +SGGA       TSLYVGDLDVNVTDSQL+D FSQMG VVSVRVCRDL +RRSLGYGYVN
Sbjct: 24   TSGGATAAGFGTTSLYVGDLDVNVTDSQLFDAFSQMGPVVSVRVCRDLATRRSLGYGYVN 83

Query: 572  FANPQDAEKALMELNFTPLNGKDIRIMYSHRDPSVRXXXXXXXXXXXXXXXXXXXXXXXX 751
            F NPQDA +A+ ELN+ PL GK IR+MYSHRDPSVR                        
Sbjct: 84   FTNPQDAARAIQELNYIPLYGKPIRVMYSHRDPSVR-----------RSGAGNIFIKNLD 132

Query: 752  XXXXXXXXXXXXXXXXXXLSCKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGK 931
                              +SCKVA +SSGQS GYGFVQYA+EESAQKAIEKLNGMLLN K
Sbjct: 133  ESIDHKALHDTFSVFGNIVSCKVAVDSSGQSKGYGFVQYANEESAQKAIEKLNGMLLNDK 192

Query: 932  QVYVGPFLRKQERDMSVDKTKFTNVFVKNISESTTDEDLQ 1051
            QVYVGPFLR+QERD + +KTKFTNV+VKN++ESTTD+DL+
Sbjct: 193  QVYVGPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLK 232



 Score = 85.9 bits (211), Expect = 2e-14
 Identities = 60/220 (27%), Positives = 103/220 (46%), Gaps = 12/220 (5%)
 Frame = +2

Query: 431  SLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFANPQDAEKALME 610
            ++++ +LD ++    L+D FS  G++VS +V  D +S +S GYG+V +AN + A+KA+ +
Sbjct: 125  NIFIKNLDESIDHKALHDTFSVFGNIVSCKVAVD-SSGQSKGYGFVQYANEESAQKAIEK 183

Query: 611  LNFTPLNGKDIRIMYSHRDPSVRXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 790
            LN   LN K + +      P +R                                     
Sbjct: 184  LNGMLLNDKQVYV-----GPFLRRQERDSTANKTKFTNVYVKNLAESTTDDDLKNAFGEY 238

Query: 791  XXXXXLSCKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVYVGPFLRKQER 970
                  S  V  +  G+S G+GFV + + + A +A+E LNG   + K+ YVG   +K ER
Sbjct: 239  GKIT--SAVVMKDGDGKSKGFGFVNFENADDAARAVESLNGHKFDDKEWYVGRAQKKSER 296

Query: 971  DM------------SVDKTKFTNVFVKNISESTTDEDLQK 1054
            +             + DK + +N++VKN+  S +DE L++
Sbjct: 297  ETELRVRYEQNLKEAADKFQSSNLYVKNLDPSISDEKLKE 336


>ref|XP_003518706.1| PREDICTED: polyadenylate-binding protein 2-like [Glycine max]
          Length = 646

 Score =  258 bits (659), Expect = 2e-66
 Identities = 139/216 (64%), Positives = 156/216 (72%), Gaps = 1/216 (0%)
 Frame = +2

Query: 407  SGGAPFVT-SLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFANP 583
            + G  FVT SLYVGDLD NVTD+QLYDLF+Q+G VVSVRVCRDLTSRRSLGYGYVNF+NP
Sbjct: 20   AAGNQFVTTSLYVGDLDPNVTDAQLYDLFNQLGQVVSVRVCRDLTSRRSLGYGYVNFSNP 79

Query: 584  QDAEKALMELNFTPLNGKDIRIMYSHRDPSVRXXXXXXXXXXXXXXXXXXXXXXXXXXXX 763
            QDA +AL  LNFTPLN + IRIMYSHRDPS+R                            
Sbjct: 80   QDAARALDVLNFTPLNNRPIRIMYSHRDPSIR-----------KSGQGNIFIKNLDRAID 128

Query: 764  XXXXXXXXXXXXXXLSCKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVYV 943
                          LSCKVAT+SSGQS GYGFVQ+ +EESAQKAIEKLNGMLLN KQVYV
Sbjct: 129  HKALHDTFSTFGNILSCKVATDSSGQSKGYGFVQFDNEESAQKAIEKLNGMLLNDKQVYV 188

Query: 944  GPFLRKQERDMSVDKTKFTNVFVKNISESTTDEDLQ 1051
            GPFLRKQER+ + DK KF NVFVKN+SESTTD++L+
Sbjct: 189  GPFLRKQERESTADKAKFNNVFVKNLSESTTDDELK 224


Top