BLASTX nr result

ID: Scutellaria22_contig00002723 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00002723
         (2171 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vin...   281   7e-73
ref|XP_002510776.1| RNA-binding region-containing protein, putat...   276   2e-71
ref|XP_002319865.1| predicted protein [Populus trichocarpa] gi|2...   274   6e-71
ref|XP_003605647.1| RNA-binding protein [Medicago truncatula] gi...   271   7e-70
emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]   269   3e-69

>ref|XP_002266779.1| PREDICTED: RNA-binding protein 38 [Vitis vinifera]
            gi|297734754|emb|CBI16988.3| unnamed protein product
            [Vitis vinifera]
          Length = 264

 Score =  281 bits (718), Expect = 7e-73
 Identities = 163/281 (58%), Positives = 172/281 (61%), Gaps = 30/281 (10%)
 Frame = -3

Query: 2031 MTPANIAGQFGDTTYTKVFVGGLAWETQKDTMKKYFQQFGEILEAVVITDKTTGRSKGYG 1852
            MTPAN+AGQFGDTTYTKVFVGGLAWETQK+TMKKYF+QFGEILEAVVITDKTTGRSKGYG
Sbjct: 1    MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYG 60

Query: 1851 FVTFREPDAAMRACVDATPVIDGRRANCNLASLGVQRSKPSTPKHXXXXXXXXXXXXXXX 1672
            FVTFREPDAAMRACVDA PVIDGRRANCNLASLGVQRSKPSTPKH               
Sbjct: 61   FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH------------GGG 108

Query: 1671 XXXXXXXXXXXXXXXXXXXXXXXXXXFPHYSIQQGIPYNLYGYSQYSAEYAYPTSY---- 1504
                                      FPHY+IQQGIPYNLYGYS YS +Y YPTSY    
Sbjct: 109  RNFRVMGSFQTGFQGGVGTAFPSAATFPHYAIQQGIPYNLYGYSPYSPDYTYPTSYYSVY 168

Query: 1503 ---------YGVXXXXXXXXXXXXXXXYLNLSEGA------------TGYGLQYPXXXXX 1387
                     YG                YL   EG+             GYG+QYP     
Sbjct: 169  GGAAAQYPVYGAGPGGMMTGAGAAFYPYLQFGEGSGGAAASGGYTSGQGYGVQYP----H 224

Query: 1386 HLFPYSAT-----YPPHYGTPVSLAPPTPLQSAVCFAVPQA 1279
            HL  YSA      YP HYG P+SLA PTP   +VCFAVPQA
Sbjct: 225  HLVQYSAINSTGGYPQHYGAPMSLA-PTPALQSVCFAVPQA 264


>ref|XP_002510776.1| RNA-binding region-containing protein, putative [Ricinus communis]
            gi|223551477|gb|EEF52963.1| RNA-binding region-containing
            protein, putative [Ricinus communis]
          Length = 259

 Score =  276 bits (705), Expect = 2e-71
 Identities = 159/278 (57%), Positives = 171/278 (61%), Gaps = 27/278 (9%)
 Frame = -3

Query: 2031 MTPANIAGQFGDTTYTKVFVGGLAWETQKDTMKKYFQQFGEILEAVVITDKTTGRSKGYG 1852
            MTP+N+AGQFGDTTYTKVFVGGLAWETQKDTMKKYF+QFGEILEAVVITDK TGRSKGYG
Sbjct: 1    MTPSNLAGQFGDTTYTKVFVGGLAWETQKDTMKKYFEQFGEILEAVVITDKATGRSKGYG 60

Query: 1851 FVTFREPDAAMRACVDATPVIDGRRANCNLASLGVQRSKPSTPKHXXXXXXXXXXXXXXX 1672
            FVTFR+P+AAMRACVD+ PVIDGRRANCNLASLGVQRSKPSTPKH               
Sbjct: 61   FVTFRDPEAAMRACVDSAPVIDGRRANCNLASLGVQRSKPSTPKH--------------G 106

Query: 1671 XXXXXXXXXXXXXXXXXXXXXXXXXXFPHYSIQQGIPYNLYGYSQYSAEYAYPTSY---- 1504
                                      FPHY+IQQGIPYN+YGYS YS EY YPTSY    
Sbjct: 107  GGGGRNLRVISSFQTGFGTAFPSAASFPHYAIQQGIPYNVYGYSPYSPEYTYPTSYYNVY 166

Query: 1503 ---------YGVXXXXXXXXXXXXXXXYLNLSEGATG---------YGLQYPXXXXXHLF 1378
                     YG                YL   EG+ G         Y +QYP     HLF
Sbjct: 167  GGATAQYPMYGTGHSGMMSGAAAAFYPYLQFGEGSGGATSYSSSQNYNVQYP----HHLF 222

Query: 1377 PYSAT-----YPPHYGTPVSLAPPTPLQSAVCFAVPQA 1279
             YSA      YP H+G P+SLAP   LQS VCFAVPQA
Sbjct: 223  QYSAVNSTGGYPQHFGAPLSLAPTASLQS-VCFAVPQA 259


>ref|XP_002319865.1| predicted protein [Populus trichocarpa] gi|222858241|gb|EEE95788.1|
            predicted protein [Populus trichocarpa]
          Length = 266

 Score =  274 bits (701), Expect = 6e-71
 Identities = 159/282 (56%), Positives = 171/282 (60%), Gaps = 31/282 (10%)
 Frame = -3

Query: 2031 MTPANIAGQFGDTTYTKVFVGGLAWETQKDTMKKYFQQFGEILEAVVITDKTTGRSKGYG 1852
            MTP+N+AGQFGDTTYTKVFVGGLAWETQK+TMKKYF+QFGEILEAVVI DK TGRSKGYG
Sbjct: 1    MTPSNLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVIADKATGRSKGYG 60

Query: 1851 FVTFREPDAAMRACVDATPVIDGRRANCNLASLGVQRSKPSTPKHXXXXXXXXXXXXXXX 1672
            FVTFREPDAAMRACVDA+PVIDGRRANCNLASLGVQRSKPSTPKH               
Sbjct: 61   FVTFREPDAAMRACVDASPVIDGRRANCNLASLGVQRSKPSTPKH-----------GAAG 109

Query: 1671 XXXXXXXXXXXXXXXXXXXXXXXXXXFPHYSIQQGIPYNLYGYSQYSAEYAYPTSY---- 1504
                                      FPHY+IQQGIPYN+YGYS YS +Y YP SY    
Sbjct: 110  RNFRVMSSFQTGFGGGVGTAFPSAASFPHYAIQQGIPYNVYGYSSYSPDYTYPASYYNMY 169

Query: 1503 ---------YGVXXXXXXXXXXXXXXXYLNLSEGATG------------YGLQYPXXXXX 1387
                     YG                YL   EG+TG            YG+QYP     
Sbjct: 170  GGATAQYPMYGSGHGGMMNGAAAAFYPYLQFGEGSTGGATSYSNTSGQSYGVQYP----H 225

Query: 1386 HLFPYSAT------YPPHYGTPVSLAPPTPLQSAVCFAVPQA 1279
            HLF YS+       YP HYG P+SLAP   L S VCFAVPQA
Sbjct: 226  HLFQYSSINSTTGGYPQHYGAPMSLAPTAALPS-VCFAVPQA 266


>ref|XP_003605647.1| RNA-binding protein [Medicago truncatula] gi|355506702|gb|AES87844.1|
            RNA-binding protein [Medicago truncatula]
          Length = 267

 Score =  271 bits (692), Expect = 7e-70
 Identities = 154/283 (54%), Positives = 167/283 (59%), Gaps = 32/283 (11%)
 Frame = -3

Query: 2031 MTPANIAGQFGDTTYTKVFVGGLAWETQKDTMKKYFQQFGEILEAVVITDKTTGRSKGYG 1852
            MTP N+AGQFGDTTYTKVFVGGLAWETQK+TMKKYF+QFGEILEAVVITDK TGRSKGYG
Sbjct: 1    MTPINLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKATGRSKGYG 60

Query: 1851 FVTFREPDAAMRACVDATPVIDGRRANCNLASLGVQRSKPSTPKHXXXXXXXXXXXXXXX 1672
            FVTFREPDAAMRACVDA P+IDGRRANCNLASLGVQRSKPSTPKH               
Sbjct: 61   FVTFREPDAAMRACVDAAPIIDGRRANCNLASLGVQRSKPSTPKH------------GGG 108

Query: 1671 XXXXXXXXXXXXXXXXXXXXXXXXXXFPHYSIQQGIPYNLYGYSQYSAEYAYPTSYYGV- 1495
                                      FPHY+IQQGIPYN+YGYS YS +Y+YPTSYYG+ 
Sbjct: 109  GRNIRVMGSFQTGFGGVGSAFPSAATFPHYAIQQGIPYNVYGYSSYSPDYSYPTSYYGMY 168

Query: 1494 ---------------XXXXXXXXXXXXXXXYLNLSEG-----------ATGYGLQYPXXX 1393
                                          YL   EG             GYG+ YP   
Sbjct: 169  GGATAQYPVYGNGPAGGMMTGGAAAAAYYPYLQYGEGTGGATTGGYTSGQGYGVNYP--- 225

Query: 1392 XXHLFPYS-----ATYPPHYGTPVSLAPPTPLQSAVCFAVPQA 1279
               +F YS       Y  HYGTP+SLAP      +VCFAVPQA
Sbjct: 226  -PQVFQYSPIASTGGYAQHYGTPISLAPSPAALPSVCFAVPQA 267


>emb|CAN73746.1| hypothetical protein VITISV_041364 [Vitis vinifera]
          Length = 269

 Score =  269 bits (687), Expect = 3e-69
 Identities = 156/272 (57%), Positives = 164/272 (60%), Gaps = 30/272 (11%)
 Frame = -3

Query: 2031 MTPANIAGQFGDTTYTKVFVGGLAWETQKDTMKKYFQQFGEILEAVVITDKTTGRSKGYG 1852
            MTPAN+AGQFGDTTYTKVFVGGLAWETQK+TMKKYF+QFGEILEAVVITDKTTGRSKGYG
Sbjct: 1    MTPANLAGQFGDTTYTKVFVGGLAWETQKETMKKYFEQFGEILEAVVITDKTTGRSKGYG 60

Query: 1851 FVTFREPDAAMRACVDATPVIDGRRANCNLASLGVQRSKPSTPKHXXXXXXXXXXXXXXX 1672
            FVTFREPDAAMRACVDA PVIDGRRANCNLASLGVQRSKPSTPKH               
Sbjct: 61   FVTFREPDAAMRACVDAAPVIDGRRANCNLASLGVQRSKPSTPKH------------GGG 108

Query: 1671 XXXXXXXXXXXXXXXXXXXXXXXXXXFPHYSIQQGIPYNLYGYSQYSAEYAYPTSY---- 1504
                                      FPHY+IQQGIPYNLYGYS YS +Y YPTSY    
Sbjct: 109  RNFRVMGSFQTGFQGGVGTAFPSAATFPHYAIQQGIPYNLYGYSPYSPDYTYPTSYYSVY 168

Query: 1503 ---------YGVXXXXXXXXXXXXXXXYLNLSEGA------------TGYGLQYPXXXXX 1387
                     YG                YL   EG+             GYG+QYP     
Sbjct: 169  GGAAAQYPVYGAGPGGMMTGAGAAFYPYLQFGEGSGGAAASGGYTSGQGYGVQYP----H 224

Query: 1386 HLFPYSAT-----YPPHYGTPVSLAPPTPLQS 1306
            HL  YSA      YP HYG P+SLAP   LQS
Sbjct: 225  HLVQYSAINSTGGYPQHYGAPMSLAPTPALQS 256


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