BLASTX nr result

ID: Scutellaria22_contig00000439 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00000439
         (715 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002266424.1| PREDICTED: photosystem I reaction center sub...   146   4e-33
ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Popu...   140   3e-31
sp|Q41229.1|PSAEB_NICSY RecName: Full=Photosystem I reaction cen...   139   4e-31
dbj|BAF80474.1| PSI reaction center subunit III [Citrus sinensis]     138   1e-30
dbj|BAF80472.1| PS1 reaction center subunit III [Citrus sinensis...   138   1e-30

>ref|XP_002266424.1| PREDICTED: photosystem I reaction center subunit IV A,
           chloroplastic-like [Vitis vinifera]
          Length = 143

 Score =  146 bits (369), Expect = 4e-33
 Identities = 82/144 (56%), Positives = 92/144 (63%), Gaps = 1/144 (0%)
 Frame = -3

Query: 590 MATSSMASAACGFVVAPTMTSNTT-TLKSSMLFFSPKNNRNLRLVVRXXXXXXXXXXXXX 414
           MA+ SMASAA GFV+ PT  S T  T   SM+ FSPKN+RN RLVVR             
Sbjct: 1   MASCSMASAASGFVLTPTPNSTTKPTSTPSMVIFSPKNHRNSRLVVRASEGGPPPPPPPP 60

Query: 413 XXXXXXXXXXXXXXXXXXXXPVGPPRGSKVRILRMESYWYKGVGSVVTVDQDPKTRYPVV 234
                                +GP RG+KV+ILR ESYWY G+GSVV VDQDPKTRYPVV
Sbjct: 61  PPAPAPVAEGGAPPPKPPP--IGPKRGTKVKILRKESYWYNGIGSVVAVDQDPKTRYPVV 118

Query: 233 VRFNKVNYANVSTNNYALDEVEVV 162
           VRFNKVNYANVSTNNYALDE++ V
Sbjct: 119 VRFNKVNYANVSTNNYALDEIQEV 142


>ref|XP_002301832.1| hypothetical protein POPTRDRAFT_711610 [Populus trichocarpa]
           gi|222843558|gb|EEE81105.1| hypothetical protein
           POPTRDRAFT_711610 [Populus trichocarpa]
          Length = 140

 Score =  140 bits (352), Expect = 3e-31
 Identities = 80/146 (54%), Positives = 94/146 (64%), Gaps = 3/146 (2%)
 Frame = -3

Query: 590 MATSSMASAACGFVVAPTMTSNT-TTLKSSMLFFSPKNNRN--LRLVVRXXXXXXXXXXX 420
           MA+ +MASAA GF +APT+ +NT +T K +MLFFS KNN     RLVVR           
Sbjct: 1   MASCNMASAASGFALAPTVATNTNSTSKPTMLFFSSKNNNKNYSRLVVRSAEEGASPPAA 60

Query: 419 XXXXXXXXXXXXXXXXXXXXXXPVGPPRGSKVRILRMESYWYKGVGSVVTVDQDPKTRYP 240
                                  +GP RG+KV+ILR ESYW+ GVGSVV VDQDP++RYP
Sbjct: 61  TTEPAVAEAPKPKPPP-------IGPKRGTKVKILRKESYWFNGVGSVVAVDQDPRSRYP 113

Query: 239 VVVRFNKVNYANVSTNNYALDEVEVV 162
           VVVRFNKVNYANVSTNNYALDE+E V
Sbjct: 114 VVVRFNKVNYANVSTNNYALDEIEEV 139


>sp|Q41229.1|PSAEB_NICSY RecName: Full=Photosystem I reaction center subunit IV B,
           chloroplastic; Short=PSI-E B; Contains: RecName:
           Full=Photosystem I reaction center subunit IV B isoform
           2; Flags: Precursor gi|632724|gb|AAB31705.1| photosystem
           I subunit PSI-E [Nicotiana sylvestris]
          Length = 143

 Score =  139 bits (351), Expect = 4e-31
 Identities = 82/148 (55%), Positives = 92/148 (62%), Gaps = 5/148 (3%)
 Frame = -3

Query: 590 MATSSMASAACGFVVA-PTMTSNTTTLKSSMLFFSPKNNRNL----RLVVRXXXXXXXXX 426
           MA+SSMASAA GF+VA P + ++ T  ++SMLFFS   N       RLVVR         
Sbjct: 1   MASSSMASAASGFMVATPNIATSNTAPRTSMLFFSSSKNNTTTNFPRLVVRAAEEAAPPA 60

Query: 425 XXXXXXXXXXXXXXXXXXXXXXXXPVGPPRGSKVRILRMESYWYKGVGSVVTVDQDPKTR 246
                                    +GP RG+KVR+LR ESYWYKGVGSVV VDQDP TR
Sbjct: 61  ATATAEGEAPPAKAAKPPP------IGPKRGTKVRVLRKESYWYKGVGSVVAVDQDPNTR 114

Query: 245 YPVVVRFNKVNYANVSTNNYALDEVEVV 162
           YPVVVRFNKVNYANVSTNNYALDEVE V
Sbjct: 115 YPVVVRFNKVNYANVSTNNYALDEVEEV 142


>dbj|BAF80474.1| PSI reaction center subunit III [Citrus sinensis]
          Length = 143

 Score =  138 bits (348), Expect = 1e-30
 Identities = 78/146 (53%), Positives = 92/146 (63%), Gaps = 3/146 (2%)
 Frame = -3

Query: 590 MATSSMASAACGFVVAPTMTSNTTT-LKSSMLFFSPKNN--RNLRLVVRXXXXXXXXXXX 420
           MA+ +MASAA GF + P + +N  +  KS+MLFF PKNN   + RLVVR           
Sbjct: 1   MASCNMASAASGFSLTPNVATNVNSGSKSNMLFFPPKNNSSNSFRLVVRASEDAAAPPAA 60

Query: 419 XXXXXXXXXXXXXXXXXXXXXXPVGPPRGSKVRILRMESYWYKGVGSVVTVDQDPKTRYP 240
                                  +GP RG+KV+ILR ESYWY G+GSVV VDQDPK+RYP
Sbjct: 61  ATTAAPAEGEAAPKPKPPP----IGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYP 116

Query: 239 VVVRFNKVNYANVSTNNYALDEVEVV 162
           VVVRFNKVNYANVSTNNYALDE+E V
Sbjct: 117 VVVRFNKVNYANVSTNNYALDEIEEV 142


>dbj|BAF80472.1| PS1 reaction center subunit III [Citrus sinensis]
           gi|157678956|dbj|BAF80476.1| PSI reaction center subunit
           III [Citrus sinensis] gi|157678960|dbj|BAF80478.1| PSI
           reaction center subunit III [Citrus sinensis]
          Length = 143

 Score =  138 bits (348), Expect = 1e-30
 Identities = 78/146 (53%), Positives = 92/146 (63%), Gaps = 3/146 (2%)
 Frame = -3

Query: 590 MATSSMASAACGFVVAPTMTSNTTT-LKSSMLFFSPKNN--RNLRLVVRXXXXXXXXXXX 420
           MA+ +MASAA GF + P + +N  +  KS+MLFF PKNN   + RLVVR           
Sbjct: 1   MASCNMASAASGFSLTPNVATNVNSGSKSNMLFFPPKNNSSNSFRLVVRASEEAAAPPAA 60

Query: 419 XXXXXXXXXXXXXXXXXXXXXXPVGPPRGSKVRILRMESYWYKGVGSVVTVDQDPKTRYP 240
                                  +GP RG+KV+ILR ESYWY G+GSVV VDQDPK+RYP
Sbjct: 61  ATTAAPAEGEAAPKPKPPP----IGPKRGAKVKILRRESYWYNGIGSVVAVDQDPKSRYP 116

Query: 239 VVVRFNKVNYANVSTNNYALDEVEVV 162
           VVVRFNKVNYANVSTNNYALDE+E V
Sbjct: 117 VVVRFNKVNYANVSTNNYALDEIEEV 142


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