BLASTX nr result

ID: Scutellaria22_contig00000233 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00000233
         (1113 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]               229   1e-57
ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotei...   203   7e-50
ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|2...   201   2e-49
ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycin...   198   2e-48
ref|NP_001237887.1| uncharacterized protein LOC100499914 [Glycin...   192   1e-46

>gb|AAA33847.1| spliceosomal protein [Solanum tuberosum]
          Length = 231

 Score =  229 bits (583), Expect = 1e-57
 Identities = 117/168 (69%), Positives = 125/168 (74%)
 Frame = +3

Query: 78  MLTSDIPPNQTIYXXXXXXXXXXXXLKRSLYALFSQYGRIVDVVALKTAKLRGQAWIVFS 257
           MLT DIPPNQTIY            LKRSLY LFSQYGRIVD+VALKT KLRGQ+W+VFS
Sbjct: 2   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRIVDIVALKTPKLRGQSWVVFS 61

Query: 258 EVTAASNAVRQMQNFPFYDKPLRIQYAKSKSDCIAKAEGTYDXXXXXXXXXXXXXXXXXG 437
           EVTAASNAVRQMQNFPFYDKP+RIQYAKSKSDCIAKAEGTYD                  
Sbjct: 62  EVTAASNAVRQMQNFPFYDKPMRIQYAKSKSDCIAKAEGTYDKKKKQDEKVEKRKRTEET 121

Query: 438 QQNAGANGPRADTNGGPATAPRQGKPTTQEAAAEPNNILFIQNLPYET 581
            Q   ANGPR D+NGGPA A RQGKP+ Q+  AEPNNILFIQNLP+ET
Sbjct: 122 PQTGAANGPRTDSNGGPAAASRQGKPSAQD-VAEPNNILFIQNLPHET 168



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = +1

Query: 736 GIAFVEFEDDSQSSVAMQDLQGFKITAQNPMAITYAKK 849
           GIAFVEF+DD QSSVAMQ LQGFKIT QNPMAITYAKK
Sbjct: 194 GIAFVEFDDDVQSSVAMQALQGFKITPQNPMAITYAKK 231


>ref|XP_002271864.1| PREDICTED: U2 small nuclear ribonucleoprotein B'' [Vitis vinifera]
           gi|297745807|emb|CBI15863.3| unnamed protein product
           [Vitis vinifera]
          Length = 234

 Score =  203 bits (516), Expect = 7e-50
 Identities = 104/171 (60%), Positives = 120/171 (70%), Gaps = 3/171 (1%)
 Frame = +3

Query: 78  MLTSDIPPNQTIYXXXXXXXXXXXXLKRSLYALFSQYGRIVDVVALKTAKLRGQAWIVFS 257
           ML+ DIPPNQ+IY            LKRSLY LFSQYGRI+DVVALKT KLRGQAW+VFS
Sbjct: 1   MLSGDIPPNQSIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTPKLRGQAWVVFS 60

Query: 258 EVTAASNAVRQMQNFPFYDKPLRIQYAKSKSDCIAKAEGTY---DXXXXXXXXXXXXXXX 428
           EVTAASNAVRQMQNFPFYDKP+R+QYAK+KSDC+AKA+GT+   +               
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRVQYAKTKSDCVAKADGTFVPREKKKKQEEKAEKKRRA 120

Query: 429 XXGQQNAGANGPRADTNGGPATAPRQGKPTTQEAAAEPNNILFIQNLPYET 581
              QQ+  ANG  A+TNGGP    RQG    +E  A PNNILFIQNLP++T
Sbjct: 121 EEAQQSGNANGRNAETNGGPTPPFRQGNQGAREPEAAPNNILFIQNLPHQT 171



 Score = 65.9 bits (159), Expect = 2e-08
 Identities = 32/38 (84%), Positives = 34/38 (89%)
 Frame = +1

Query: 736 GIAFVEFEDDSQSSVAMQDLQGFKITAQNPMAITYAKK 849
           GIAFVEFEDD QSS+AM+ LQGFKIT QNPMAI YAKK
Sbjct: 197 GIAFVEFEDDVQSSMAMEALQGFKITPQNPMAIAYAKK 234


>ref|XP_002326095.1| predicted protein [Populus trichocarpa] gi|222862970|gb|EEF00477.1|
           predicted protein [Populus trichocarpa]
          Length = 233

 Score =  201 bits (512), Expect = 2e-49
 Identities = 110/172 (63%), Positives = 122/172 (70%), Gaps = 4/172 (2%)
 Frame = +3

Query: 78  MLTSDIPPNQTIYXXXXXXXXXXXXLKRSLYALFSQYGRIVDVVALKTAKLRGQAWIVFS 257
           MLT DIPPNQTIY            LKRSLY LFSQYGRI+DVVALKTA+LRGQAW+VFS
Sbjct: 1   MLTGDIPPNQTIYIKNLNEKVKKEELKRSLYCLFSQYGRILDVVALKTARLRGQAWVVFS 60

Query: 258 EVTAASNAVRQMQNFPFYDKPLRIQYAKSKSDCIAKAEGTYD----XXXXXXXXXXXXXX 425
           EVTAASNAVRQMQ FPFYDKP+RIQYAK+KSDCIA+AEG YD                  
Sbjct: 61  EVTAASNAVRQMQGFPFYDKPMRIQYAKTKSDCIAEAEGVYDPNAKKKKKQEEKAERKKR 120

Query: 426 XXXGQQNAGANGPRADTNGGPATAPRQGKPTTQEAAAEPNNILFIQNLPYET 581
               QQ+A ANG  A++NGGP T+ RQG  + QE    PNNILFIQNLP+ET
Sbjct: 121 AEEAQQSAPANGKPAESNGGP-TSFRQGNQSAQE-TVPPNNILFIQNLPHET 170



 Score = 68.9 bits (167), Expect = 2e-09
 Identities = 34/38 (89%), Positives = 35/38 (92%)
 Frame = +1

Query: 736 GIAFVEFEDDSQSSVAMQDLQGFKITAQNPMAITYAKK 849
           GIAFVEFEDD QSS+AMQ LQGFKIT QNPMAITYAKK
Sbjct: 196 GIAFVEFEDDVQSSMAMQALQGFKITPQNPMAITYAKK 233


>ref|NP_001241278.1| uncharacterized protein LOC100805822 [Glycine max]
           gi|255647802|gb|ACU24361.1| unknown [Glycine max]
          Length = 232

 Score =  198 bits (503), Expect = 2e-48
 Identities = 107/171 (62%), Positives = 120/171 (70%), Gaps = 3/171 (1%)
 Frame = +3

Query: 78  MLTSDIPPNQTIYXXXXXXXXXXXXLKRSLYALFSQYGRIVDVVALKTAKLRGQAWIVFS 257
           ML+ DIPPNQTIY            LKRSLY LFSQYGRI+DV+ALKT KLRGQAW+ FS
Sbjct: 1   MLSGDIPPNQTIYIKNINEKVKKDELKRSLYCLFSQYGRILDVIALKTPKLRGQAWVCFS 60

Query: 258 EVTAASNAVRQMQNFPFYDKPLRIQYAKSKSDCIAKAEGTY---DXXXXXXXXXXXXXXX 428
           EVTAASNAVRQMQNFPFYDKP+RIQYAK+KSDCIAK EGTY   +               
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRIQYAKTKSDCIAKEEGTYVPREKKKKQEEKAERKRRA 120

Query: 429 XXGQQNAGANGPRADTNGGPATAPRQGKPTTQEAAAEPNNILFIQNLPYET 581
              QQ+  ANG  + +NGGP  + RQG P  QE AA PNNILFI+NLP+ET
Sbjct: 121 EEAQQSGVANGTHSASNGGPTASFRQG-PGAQETAA-PNNILFIENLPHET 169



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +1

Query: 736 GIAFVEFEDDSQSSVAMQDLQGFKITAQNPMAITYAKK 849
           GIAFV+FED+ QSS+AMQ L GFKIT QNPM IT+AKK
Sbjct: 195 GIAFVDFEDEVQSSMAMQALHGFKITPQNPMIITFAKK 232


>ref|NP_001237887.1| uncharacterized protein LOC100499914 [Glycine max]
           gi|255627621|gb|ACU14155.1| unknown [Glycine max]
          Length = 232

 Score =  192 bits (489), Expect = 1e-46
 Identities = 104/171 (60%), Positives = 119/171 (69%), Gaps = 3/171 (1%)
 Frame = +3

Query: 78  MLTSDIPPNQTIYXXXXXXXXXXXXLKRSLYALFSQYGRIVDVVALKTAKLRGQAWIVFS 257
           ML+ DIPPNQTIY            LKRSLY LF QYGRI+DV+ALKT KLRGQAW+ FS
Sbjct: 1   MLSGDIPPNQTIYIKNLNEKVKKDELKRSLYCLFPQYGRILDVIALKTPKLRGQAWVCFS 60

Query: 258 EVTAASNAVRQMQNFPFYDKPLRIQYAKSKSDCIAKAEGTY---DXXXXXXXXXXXXXXX 428
           EVTAASNAVRQMQNFPFYDKP+RI YAK+KSDCIAK EG++   +               
Sbjct: 61  EVTAASNAVRQMQNFPFYDKPMRIHYAKTKSDCIAKEEGSFVPREKKKKQEEKAERKRRV 120

Query: 429 XXGQQNAGANGPRADTNGGPATAPRQGKPTTQEAAAEPNNILFIQNLPYET 581
              QQ+  ANG  + +NGGP  + RQG P  QEAAA PNNILFI+NLP+ET
Sbjct: 121 EEAQQSGVANGTHSASNGGPTASFRQG-PGAQEAAA-PNNILFIENLPHET 169



 Score = 60.8 bits (146), Expect = 6e-07
 Identities = 29/38 (76%), Positives = 33/38 (86%)
 Frame = +1

Query: 736 GIAFVEFEDDSQSSVAMQDLQGFKITAQNPMAITYAKK 849
           GIAFV+FED+ QSS+AMQ L GFKIT QNPM IT+AKK
Sbjct: 195 GIAFVDFEDEVQSSMAMQALHGFKITPQNPMIITFAKK 232


Top