BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00000214
         (4813 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus co...   714   0.0  
ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Bra...   594   0.0  
ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Gly...   594   0.0  
gb|AFW64884.1| hypothetical protein ZEAMMB73_783884 [Zea mays]        602   0.0  
ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana] ...   582   e-176

>ref|XP_002523870.1| 5'->3' exoribonuclease, putative [Ricinus communis]
            gi|223536958|gb|EEF38596.1| 5'->3' exoribonuclease,
            putative [Ricinus communis]
          Length = 993

 Score =  714 bits (1844), Expect(2) = 0.0
 Identities = 382/789 (48%), Positives = 510/789 (64%), Gaps = 11/789 (1%)
 Frame = +1

Query: 556  PPTTFEEVFCHMYEYIDRLFHIVKPKKLLFMAIDGVAPRAKMNQQRARRFRAAKDTEMAX 735
            PPTTF+EVF ++Y+YID +F IV+P+ LL++AIDGVAPRAKMNQQR+RRFR AKDTE+A 
Sbjct: 51   PPTTFDEVFNNIYKYIDHIFSIVRPRNLLYLAIDGVAPRAKMNQQRSRRFRNAKDTEIAE 110

Query: 736  XXXXXXXXXXXXXXXXXXXXXXXXXXXEMEEQLRKEFAMEGKAVLPKEESEISDSNVITP 915
                                         EE+LRKE+ ++GK VLPK+ SE+SDSN+ITP
Sbjct: 111  AE---------------------------EERLRKEYEIQGKQVLPKQYSEVSDSNIITP 143

Query: 916  GTEFMEMLSNKLQSYVSRRMREDPAWSDIKVILLDDKVPGEGEHKIMSFIRAQRALPGYD 1095
            GTEFM  LS KLQ Y+   +  DPAW  IKVIL D  VPGEGEHKIMSFIR QR LP Y+
Sbjct: 144  GTEFMFTLSIKLQEYMISNINSDPAWKAIKVILSDASVPGEGEHKIMSFIRQQRMLPDYN 203

Query: 1096 PNTTHCLYGLDADLIMLALATHEPHFCILREEVLSTNKGNSCHKIETRSLKSREWFKEHP 1275
            PNT HCLYGLDADLIMLALA+HE HF ILRE VL     + C    T SL+ R  F E  
Sbjct: 204  PNTRHCLYGLDADLIMLALASHEVHFSILREVVLLQQPQSICLSAHT-SLQGRIEFGEFG 262

Query: 1276 LEKSISVSAIETEKLASCNEAPWSVDRKQVYQFLNVCILREYLALDLEIHNSDNKFECDL 1455
              ++ +      +      +  +    ++ YQFL+V ILR+YL L+++I++    F  D 
Sbjct: 263  SSENKTKRRFSNDDNTLAKDVSFI---EKPYQFLHVWILRDYLKLEMDIYDPPENFTFDS 319

Query: 1456 EKXXXXXXXXXXXAGNDFLPHMPTLEIHEGCIDLLMHVYKNEFQNLGGYLVDMQKVDDKK 1635
            E+           AGNDF+P++PTL+IHE  +DLLM VYK  F+ LGGYLVD+ +V+  K
Sbjct: 320  ERIIDDFVFMCFFAGNDFIPNLPTLQIHERAVDLLMTVYKKNFKKLGGYLVDVHQVNSLK 379

Query: 1636 GAYIKLKRVERFLLAVGAYEDEIFAKRSQLKERKLRRIL--ADYREAKDDEKNQLEEGTS 1809
              Y+ LKRVE+F+L +GAYE+ IF KRS+L+ER LR++   +D   AK+ + N  ++   
Sbjct: 380  NDYLDLKRVEKFILLIGAYEEMIFKKRSELRERMLRKLCQHSDAANAKELDGNVEQDMLK 439

Query: 1810 SDIVGMNTIVEL--DGLKISTSDHVDADTVLNNTKELKQKLKENTRKQSDLFKDGAIGTD 1983
                 ++   ++  D + +S        +VL NTK  K++LK   R++SDLF++G    D
Sbjct: 440  ISFSSLDAKAQISEDLVSVSAVSISLWFSVLQNTKRFKEELKARLRQKSDLFQNGGFRAD 499

Query: 1984 KVKLGSPGWKQRYYRVKFSAESTEEMEATRKAVVAKYSEGLCWVLLYYFSGVPSWTWFYP 2163
             VKLG+ GWK+RYY  KFSAE+  ++E  RK +V KY+EGL WVL YYFS VPSWTWFYP
Sbjct: 500  TVKLGTTGWKKRYYEQKFSAENPSDIELIRKEMVQKYTEGLLWVLGYYFSAVPSWTWFYP 559

Query: 2164 FHYGPLASDMRGLSQTKVKFQKGVPFKPFDQLMGVLPPRSSHALPESYKGLMIDENSSII 2343
            +H+ P ASDM+G++Q K KF KG PFKPFDQLMGVLPPRS+HALP+SY+ LMIDE SSII
Sbjct: 560  YHHAPFASDMKGMAQVKFKFPKGSPFKPFDQLMGVLPPRSAHALPKSYRQLMIDERSSII 619

Query: 2344 GFYPTDFETDVDGKRFMWQGICKLPFIEEDRLLTATSKLENGLKDHEKTRNIETLGRLFV 2523
             FYP +F+ D+DGKRFMWQGICKLPFI+E+RLL  T K+E  L   E  +N+E + +LFV
Sbjct: 620  DFYPAEFQIDIDGKRFMWQGICKLPFIDEERLLAETKKMEKELTRKEADKNVENVDKLFV 679

Query: 2524 RCSSEMAQQLSCNGVRSSSERIKGAIMIESPMEGVKGTMHLMPEDLIKVDDEL-CVFYET 2700
            R  +    QL    ++  SE   G                  P+D++++ + L C+ +E 
Sbjct: 680  RRENFSESQL----LQLVSEFAAGR-----------------PKDMVEIKNSLRCLLFEL 718

Query: 2701 PRDSQHIPRLLEGVNIPEKMVNEEDIVETILWHQSHGHTMPSNINMFQ------NQRMMK 2862
            P+ SQ IPR LEGV  PE+++ ++DI+ET LWH+  G   P+ + + +      ++R   
Sbjct: 719  PKGSQFIPRPLEGVKYPEQIIGDDDIMETQLWHECPGSRCPTRLRVQESHIKSYHRRDFA 778

Query: 2863 PNFVSRAPN 2889
            P+F +   N
Sbjct: 779  PSFSAERNN 787



 Score = 76.6 bits (187), Expect(2) = 0.0
 Identities = 31/49 (63%), Positives = 39/49 (79%)
 Frame = +2

Query: 308 MGVPSFYRWLVNKYPKIVVDAADHNTTMEFDNFYLDMNGIIHPCFHPEN 454
           MGVP+FY+WLVNKYP ++     +   +EFDN YLDMNGIIHPCFHP++
Sbjct: 1   MGVPAFYKWLVNKYPNVITSPNPNG--LEFDNLYLDMNGIIHPCFHPDD 47


>ref|XP_003564736.1| PREDICTED: 5'-3' exoribonuclease 3-like [Brachypodium distachyon]
          Length = 1061

 Score =  594 bits (1532), Expect(2) = 0.0
 Identities = 382/950 (40%), Positives = 493/950 (51%), Gaps = 71/950 (7%)
 Frame = +1

Query: 559  PTTFEEVFCHMYEYIDRLFHIVKPKKLLFMAIDGVAPRAKMNQQRARRFRAAKDTEMAXX 738
            PTTF EVF  M++YIDRLF +V+P+KL++MAIDGVAPRAKMNQQR+RRFRAAKD   A  
Sbjct: 71   PTTFAEVFQCMFDYIDRLFVMVRPRKLMYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAA 130

Query: 739  XXXXXXXXXXXXXXXXXXXXXXXXXXEMEEQLRKEFAMEGKAVLPKEESEISDSNVITPG 918
                                        EE+LR+EF  EG+ + PK +S+  DSNVITPG
Sbjct: 131  E---------------------------EEKLREEFEREGRKLPPKLQSQTCDSNVITPG 163

Query: 919  TEFMEMLSNKLQSYVSRRMREDPAWSDIKVILLDDKVPGEGEHKIMSFIRAQRALPGYDP 1098
            TEFM +LS  LQ Y+  R+  DP W  IKVIL D  VPGEGEHK+MS+IR QR LPG++P
Sbjct: 164  TEFMAVLSVALQYYIHLRLNYDPGWKQIKVILSDANVPGEGEHKVMSYIRGQRNLPGFNP 223

Query: 1099 NTTHCLYGLDADLIMLALATHEPHFCILREEVLSTNKGNSCHKIETRSLKSREWFKEHPL 1278
            NT HCLYGLDADLIMLALATHE HF ILRE V +  +   C                   
Sbjct: 224  NTRHCLYGLDADLIMLALATHEVHFSILREVVFTPGQQEKCFLCGQVG------------ 271

Query: 1279 EKSISVSAIETEKLASCNEAPWSVDRKQVYQFLNVCILREYLALDLEIHNSDNKFECDLE 1458
              +         K    +E   ++  K+ YQFLN+  LREY+  +  + N    F+ DLE
Sbjct: 272  HLAAKCEGKAKRKAGEFDEKGDAIVPKKPYQFLNIWTLREYIEYEFRMPNPP--FQIDLE 329

Query: 1459 KXXXXXXXXXXXAGNDFLPHMPTLEIHEGCIDLLMHVYKNEFQNLGGYLVDMQKVDDKKG 1638
            +            GNDFLPHMPTLEI EG I+LLM VYK EF ++GGYL D    D    
Sbjct: 330  RIIDDFIFMCFFVGNDFLPHMPTLEIREGAINLLMAVYKKEFPSMGGYLTDACTPD---- 385

Query: 1639 AYIKLKRVERFLLAVGAYEDEIFAKRSQLKERKLRRILADYREAKDDEKNQLEEGTSSDI 1818
                L RVE F+ AVG+YED+IF KR++L +R+  RI  D  +AK    + L+    +D+
Sbjct: 386  ----LNRVEHFIQAVGSYEDKIFQKRARLHQRQAERIRRDKAQAK--RGDDLDPHVRTDL 439

Query: 1819 V--------------GMNTIVELDG---------------LKISTSDH------VDADTV 1893
            +               + +  E +G                ++S+SD       V+A+  
Sbjct: 440  IVPVARFQGSRLASGSVASPFEQNGSHKNSTEKGSRAQKAARVSSSDSSLSAALVEAENS 499

Query: 1894 L-----NNTKELKQKLKENTRKQSDLFKDGAIGTDKVKLGSPGWKQRYYRVKFSAESTEE 2058
            L      N +++K  LK+  R++SDLF       DKVKLG PGW++RYY  KF A + E+
Sbjct: 500  LEAQERENKEDMKSMLKDALREKSDLFNSENPEEDKVKLGEPGWRERYYEDKFGARTPEQ 559

Query: 2059 MEATRKAVVAKYSEGLCWVLLYYFSGVPSWTWFYPFHYGPLASDMRGLSQTKVKFQKGVP 2238
            +E  R+ VV KY+EGLCWV+ YY+ GV SW WFYP+HY P ASD++GL +  + F  G P
Sbjct: 560  IEEIRRDVVLKYTEGLCWVMHYYYEGVCSWQWFYPYHYAPFASDLKGLGELNITFNLGSP 619

Query: 2239 FKPFDQLMGVLPPRSSHALPESYKGLMIDENSSIIGFYPTDFETDVDGKRFMWQGICKLP 2418
            FKPFDQLMGV P  SSHALP  Y+ LM D NS II FYP DFE D++GKRF WQGI KLP
Sbjct: 620  FKPFDQLMGVFPAASSHALPLQYRKLMSDPNSPIIDFYPIDFEVDMNGKRFSWQGIAKLP 679

Query: 2419 FIEEDRLLTATSKLENGLKDHEKTRNIETLGRLFVRCSSEMAQQL----SCNGVRSSSER 2586
            FI+E RLL    K+E+ L   E  RN      LFV  S  ++  +    S  G     ER
Sbjct: 680  FIDESRLLAEIKKVEHTLTPEEARRNSTMYNMLFVNGSHPLSPYIYSLNSKFGHLPDDER 739

Query: 2587 --IKGAIMIESPMEGVKGTMHLMPEDL--------------IKVDDELCVFYETPRDSQH 2718
              IK  ++  S   G+ G + L   D               I  +  +C  Y+ P   +H
Sbjct: 740  NTIK-ELLDPSASGGMNGYISLCGGDPSPPVFRSPVDGLEDIMDNQVICSIYKLPDPHKH 798

Query: 2719 IPRLLEGVNIPEKMVNEEDI-VETILWHQSHGHTMPSNINMFQNQRMMKPNFVSRAPNPA 2895
            I R   GV IP+K+V   D+    +LWH+  G     N N   N R    N  S   NP 
Sbjct: 799  IARPPIGVIIPKKIVEAGDLKPPPVLWHEDTGRRPYDNNN---NNRRHSDN--SSRQNPP 853

Query: 2896 PAFTSRGAGVGFSLGRGKTSSSMMAKESSTLNPYCSRGGRGFQPSSAP--------EPSY 3051
             A   R  G         + +     + +   PY +       P+  P         P +
Sbjct: 854  GAMHGRQLGEAAHRLVANSLNVRSGGQYAPARPYQTIMSGMHYPNGMPPRMERPVGRPGW 913

Query: 3052 HVXXXXXXXXXXXXXXXDAYQSPRPYLYYGSNNRPSHQ--ASNDFWQPRS 3195
            HV                 Y SP  +  Y  +NR  HQ  A +    PR+
Sbjct: 914  HV-----PGDNVPNGQVPIYASPSGHHQYERDNRGRHQPYARDSHHDPRA 958



 Score = 75.5 bits (184), Expect(2) = 0.0
 Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 18/78 (23%)
 Frame = +2

Query: 308 MGVPSFYRWLVNKYPKIVVDAADHN------------------TTMEFDNFYLDMNGIIH 433
           MGVP+FYRWL  KYP +VVD  +                     ++EFDN YLDMNGIIH
Sbjct: 1   MGVPAFYRWLAEKYPMVVVDVVEEEPVEIEGVKVPVDTSKPNPNSLEFDNLYLDMNGIIH 60

Query: 434 PCFHPENTVIFSSYMFIF 487
           PCFHPE+    +++  +F
Sbjct: 61  PCFHPEDRPSPTTFAEVF 78


>ref|XP_003545041.1| PREDICTED: 5'-3' exoribonuclease 3-like [Glycine max]
          Length = 1075

 Score =  594 bits (1531), Expect(2) = 0.0
 Identities = 359/840 (42%), Positives = 463/840 (55%), Gaps = 67/840 (7%)
 Frame = +1

Query: 559  PTTFEEVFCHMYEYIDRLFHIVKPKKLLFMAIDGVAPRAKMNQQRARRFRAAKDTEMAXX 738
            PT+F+EVF  M++YIDRLF +V+P++LL+MAIDGVAPRAKMNQQR+RRFRAAKD   A  
Sbjct: 71   PTSFDEVFECMFDYIDRLFIMVRPRELLYMAIDGVAPRAKMNQQRSRRFRAAKDAADAAA 130

Query: 739  XXXXXXXXXXXXXXXXXXXXXXXXXXEMEEQLRKEFAMEGKAVLPKEESEISDSNVITPG 918
                                        E +LR+EF  EG+ +  K ES+  DSNVITPG
Sbjct: 131  E---------------------------EARLREEFEKEGRKLPSKGESQTFDSNVITPG 163

Query: 919  TEFMEMLSNKLQSYVSRRMREDPAWSDIKVILLDDKVPGEGEHKIMSFIRAQRALPGYDP 1098
            TEFM +LS  LQ YV  R+  DP W +IKVIL D  VPGEGEHKIMS+IR QR L GYDP
Sbjct: 164  TEFMAVLSIALQYYVHLRLNNDPGWQNIKVILSDANVPGEGEHKIMSYIRLQRNLKGYDP 223

Query: 1099 NTTHCLYGLDADLIMLALATHEPHFCILREEVLSTNKGNSCHKIETRSLKSREWFKEHPL 1278
            NT HCLYGLDADLIMLALATHE HF ILRE V +  + + C                   
Sbjct: 224  NTRHCLYGLDADLIMLALATHEIHFSILREIVFTPGQ-DKCFLCGQMG------------ 270

Query: 1279 EKSISVSAIETEKLASCNEAPWSVDRKQVYQFLNVCILREYLALDLEIHNSDNKFECDLE 1458
              + +       K    +E   ++  K+ +QFLN+  LREYL  ++ I N  +  E D +
Sbjct: 271  HMAANCEGKAKRKAGEFDEKGEAIVTKKPFQFLNIWTLREYLEYEMRISNPPS--EIDFD 328

Query: 1459 KXXXXXXXXXXXAGNDFLPHMPTLEIHEGCIDLLMHVYKNEFQNLGGYLVDMQKVDDKKG 1638
                         GNDFLPHMPTLEI EG I+LL+ VYK EF+  GGYL +        G
Sbjct: 329  CIVDDFIFMCFFVGNDFLPHMPTLEIREGAINLLIAVYKKEFREFGGYLTN--------G 380

Query: 1639 AYIKLKRVERFLLAVGAYEDEIFAKRSQLKERKLRRILADYREAK--DDEKNQLEEGT-- 1806
            + I L RVE F+ AVG+YED+IF KR++L +R+  RI  +  +A+  DD + Q +  +  
Sbjct: 381  STINLSRVEHFIQAVGSYEDKIFQKRARLHQRQTERIKREKAQARRGDDAEPQFQPESLV 440

Query: 1807 -----------------------------SSDIVGMNTIVELDGLKISTSDH-------- 1875
                                         S+ +   N       LK+S            
Sbjct: 441  AVSRFHGSRLASAPTPPPFQPSGHYNSQASASVRKDNKEAFERPLKVSRVSSGATVAAAI 500

Query: 1876 VDADTVL-----NNTKELKQKLKENTRKQSDLFKDGAIGTDKVKLGSPGWKQRYYRVKFS 2040
            V+A+  L     +N  ELK KLKE  R++SD+F       DK+KLG PGWK+RYY  KFS
Sbjct: 501  VEAENNLEIDAQDNKDELKTKLKEILREKSDVFNSKNAEEDKIKLGEPGWKERYYEEKFS 560

Query: 2041 AESTEEMEATRKAVVAKYSEGLCWVLLYYFSGVPSWTWFYPFHYGPLASDMRGLSQTKVK 2220
            A++ EE+EA RK VV KY+EGLCWV+ YY+ GV SW WFYP+HY P ASD++GL +  + 
Sbjct: 561  AKTPEELEAIRKDVVLKYTEGLCWVMHYYYEGVCSWNWFYPYHYAPFASDLKGLGELDIS 620

Query: 2221 FQKGVPFKPFDQLMGVLPPRSSHALPESYKGLMIDENSSIIGFYPTDFETDVDGKRFMWQ 2400
            F+ G PFKPFDQL+GV P  SSHALPE Y+ LM D NS II FYP DFE D++GKRF WQ
Sbjct: 621  FKLGTPFKPFDQLLGVFPAASSHALPEPYRRLMTDPNSPIIDFYPIDFEVDMNGKRFAWQ 680

Query: 2401 GICKLPFIEEDRLLTATSKLENGLKDHEKTRNIETLGRLFVRCSSEMAQQLS-----CNG 2565
            GI KLPFI+E RLL    K+EN L   EK RN      +FV     ++  +S     C  
Sbjct: 681  GIAKLPFIDEVRLLAEVQKIENLLTPDEKRRNAIMFDLIFVNSCHPLSACISTLDNKCKN 740

Query: 2566 VRSSSERIKGAIMIESPMEGVKGTMHL---------------MPEDLIKVDDELCVFYET 2700
            + +S   +    +      G+ G + L                 ED++  +  +C  Y  
Sbjct: 741  MPNSERAVVKEKINPKESGGMNGYISLCGGEPCPPIFRSPIASMEDIMD-NHVICAIYRL 799

Query: 2701 PRDSQHIPRLLEGVNIPEKMVNEEDI-VETILWHQSHGHTMPSNINMFQNQRMMKPNFVS 2877
            P   +HI R  +GV  P+K+V   D+  E +LWH+  G    S     +N R   P  +S
Sbjct: 800  PDAHKHITRPPQGVKFPKKIVEIGDLKPEPVLWHEDSGRRHHS-----ENGRKNPPGSIS 854



 Score = 74.7 bits (182), Expect(2) = 0.0
 Identities = 35/78 (44%), Positives = 45/78 (57%), Gaps = 18/78 (23%)
 Frame = +2

Query: 308 MGVPSFYRWLVNKYPKIVVDAADHN------------------TTMEFDNFYLDMNGIIH 433
           MGVP+FYRWL  KYP ++VDA +                      +E+DN YLDMNGIIH
Sbjct: 1   MGVPAFYRWLAEKYPMVIVDAIEEEPVVIDGVQIPVDTSKKNPNNIEYDNLYLDMNGIIH 60

Query: 434 PCFHPENTVIFSSYMFIF 487
           PCFHPE+    +S+  +F
Sbjct: 61  PCFHPEDRPSPTSFDEVF 78


>gb|AFW64884.1| hypothetical protein ZEAMMB73_783884 [Zea mays]
          Length = 893

 Score =  602 bits (1551), Expect(2) = 0.0
 Identities = 357/857 (41%), Positives = 477/857 (55%), Gaps = 31/857 (3%)
 Frame = +1

Query: 547  QLFPPTTFEEVFCHMYEYIDRLFHIVKPKKLLFMAIDGVAPRAKMNQQRARRFRAAKDTE 726
            ++ PPTTF+EVF  M+EYIDRLF IV+P KLL++A+DGVAPRAKMNQQR+RRF+AAK+ +
Sbjct: 70   EVCPPTTFDEVFAAMFEYIDRLFRIVRPTKLLYLAVDGVAPRAKMNQQRSRRFKAAKEAK 129

Query: 727  MAXXXXXXXXXXXXXXXXXXXXXXXXXXXXEMEEQL-RKEFAMEGKAVL--PKEESEISD 897
             A                            E+EE+L R++F  EG+ V   P+E  E+SD
Sbjct: 130  DA----------------------------ELEEKLLREKFRAEGREVRARPRETHEVSD 161

Query: 898  SNVITPGTEFMEMLSNKLQSYVSRRMREDPAWSDIKVILLDDKVPGEGEHKIMSFIRAQR 1077
             N+ITPGTEFME LS  L+ YV  R+  DP W  IKVIL D  VPGEGEHK+MSFIR QR
Sbjct: 162  PNIITPGTEFMEKLSKALEYYVRSRLNSDPGWKGIKVILSDSNVPGEGEHKVMSFIRGQR 221

Query: 1078 ALPGYDPNTTHCLYGLDADLIMLALATHEPHFCILREEVLSTNKGNSCH-------KIET 1236
            +L  YDPNT HCLYGLDADLIMLALA+HE HF ILRE+    ++   C        K E 
Sbjct: 222  SLASYDPNTMHCLYGLDADLIMLALASHELHFSILREDGSRQSQPEKCISLSNEMLKTED 281

Query: 1237 RSLKSREWFKEHPLEKSISVSAIETEKLASCNEAPWSVDRKQVYQFLNVCILREYLALDL 1416
             S K R WF +           IET               K+ YQF+N+ +LREYL LDL
Sbjct: 282  SSRKCRGWFPQ----------VIETTP-------------KKPYQFVNIWVLREYLELDL 318

Query: 1417 EIHNSDNKFECDLEKXXXXXXXXXXXAGNDFLPHMPTLEIHEGCIDLLMHVYKNEFQNLG 1596
            +I N   K   D+E+            GNDF+P +P++EIHEG IDLL+  YK  F  +G
Sbjct: 319  KIPNPVVK--TDIERLIDDFIFICFLTGNDFIPRIPSVEIHEGAIDLLLEAYKQTFNKMG 376

Query: 1597 GYLVDMQKVDDKKGAYIKLKRVERFLLAVGAYEDEIFAKRSQLKERKLRRILADY-REAK 1773
            GY+V  +K+ DK  AY+K+ R+E+F   +   E++IF KR  L+E   R+ L     E K
Sbjct: 377  GYIVSTEKLKDKHAAYLKVSRLEKFFHELSLCEEKIFLKRYDLRESLQRKFLRQAAEECK 436

Query: 1774 DDEKNQLEEGTSSDIVGMNTIVELDGLKISTSDHV-DADTVLNNTKELKQKLKENTRKQS 1950
            +   + +EE T     G+N   +      S S +  D   V  NT EL++ LK+  R + 
Sbjct: 437  ETNYDTMEENTD----GLNLTAKSFSTNCSISTYSQDESDVKANTLELRRNLKDALRNKQ 492

Query: 1951 DLFKDGAIGTDKVKLGSPGWKQRYYRVKFSAESTEEMEATRKAVVAKYSEGLCWVLLYYF 2130
            DL K G+   D ++LG  GWK RYYR KF  E   E+   +  +V +Y EGLCWVL YYF
Sbjct: 493  DLIKSGSCKHDMIRLGLAGWKSRYYREKFGVEKLSEVGKLKNDMVQRYMEGLCWVLQYYF 552

Query: 2131 SGVPSWTWFYPFHYGPLASDMRGLSQTKVKFQKGVPFKPFDQLMGVLPPRSSHALPESYK 2310
            + VPSW+W+YP+++ P ASD +GLSQ K+ F    P KPFDQLM VLP  SS ALP+ Y+
Sbjct: 553  TDVPSWSWYYPYYHAPFASDFKGLSQFKICFTTDKPLKPFDQLMAVLPKESSCALPKCYR 612

Query: 2311 GLMIDENSSIIGFYPTDFETDVDGKRFMWQGICKLPFIEEDRLLTATSKLENGLKDHEKT 2490
             LM +E S +  FYP+D + D  GKRF+WQGI  LPFI+E  L++AT  +E  L  HE  
Sbjct: 613  ELMENEESLVQKFYPSDLQIDTHGKRFLWQGIAMLPFIDEKLLVSATKTVEGKLAVHEIN 672

Query: 2491 RNIETLGRLFVRCS-------SEMAQQLSCNGVR----SSSERIKGAIMIESPMEGVKGT 2637
            RN     ++F+R S       S  ++   C+  +     S+  + G +      +   G 
Sbjct: 673  RNAVRQEKIFMRNSNTTVPNGSAFSKAFDCSSKKLWLDPSTSELGGWLSPVDDKDTSSGF 732

Query: 2638 MH-LMPEDL--IKVDDELCVFYETPRDSQHIPRLLEGVNIPEKMVNEEDIVETILWHQSH 2808
             H  +  DL  I+ D  +   +  P   + IPRLL+ V  PEK + E +I +  LWH   
Sbjct: 733  FHSSVMRDLPDIRNDQTISFLFSNPEAVETIPRLLDDVKKPEKTITETEISKRPLWHTYP 792

Query: 2809 GHTMP-SNINMFQNQRMMKP--NFVSRAPNPAPAFTSRGAGVGFSLGRGKTSSSMMAKES 2979
            G  +P +N ++ + Q M+        RA          G G G S    ++S +      
Sbjct: 793  GCRLPETNPSVLEPQPMVSSFGRGRGRATAAETMLGGGGRGYGRSFHGAESSQTQSRGSR 852

Query: 2980 STLNPYCSRG--GRGFQ 3024
            +  N Y  RG  G GFQ
Sbjct: 853  NDGNSYAGRGTYGGGFQ 869



 Score = 63.2 bits (152), Expect(2) = 0.0
 Identities = 32/71 (45%), Positives = 38/71 (53%), Gaps = 20/71 (28%)
 Frame = +2

Query: 308 MGVPSFYRWLVNKYPKIVVDAADHN--------------------TTMEFDNFYLDMNGI 427
           MGVPSF++WLV KYP IVV A + +                        + N YLDMN I
Sbjct: 1   MGVPSFFKWLVGKYPNIVVPAKEDDGGAGAGASSPSSPWDEPAAGPNGVYHNLYLDMNAI 60

Query: 428 IHPCFHPENTV 460
           IHPCFHPE+ V
Sbjct: 61  IHPCFHPEDEV 71


>ref|NP_199069.1| 5'-3' exoribonuclease 2 [Arabidopsis thaliana]
            gi|75262831|sp|Q9FQ02.1|XRN2_ARATH RecName: Full=5'-3'
            exoribonuclease 2; AltName: Full=Protein EXORIBONUCLEASE
            2 gi|11875630|gb|AAG40733.1|AF286720_1 XRN2 [Arabidopsis
            thaliana] gi|51970342|dbj|BAD43863.1| unnamed protein
            product [Arabidopsis thaliana]
            gi|62319144|dbj|BAD94308.1| 5'-3' exoribonuclease 2
            [Arabidopsis thaliana] gi|332007441|gb|AED94824.1| 5'-3'
            exoribonuclease 2 [Arabidopsis thaliana]
          Length = 1012

 Score =  582 bits (1499), Expect(2) = e-176
 Identities = 345/801 (43%), Positives = 462/801 (57%), Gaps = 53/801 (6%)
 Frame = +1

Query: 559  PTTFEEVFCHMYEYIDRLFHIVKPKKLLFMAIDGVAPRAKMNQQRARRFRAAKDTEMAXX 738
            PTTF EVF  M++YIDRLF +V+P+KLLFMAIDGVAPRAKMNQQRARRFRAAKD   A  
Sbjct: 73   PTTFTEVFQCMFDYIDRLFVMVRPRKLLFMAIDGVAPRAKMNQQRARRFRAAKDAAEAAA 132

Query: 739  XXXXXXXXXXXXXXXXXXXXXXXXXXEMEEQLRKEFAMEGKAVLPKEESEISDSNVITPG 918
                                        EEQLR+EF  EGK + PK +S++ DSNVITPG
Sbjct: 133  E---------------------------EEQLREEFEREGKKLPPKVDSQVFDSNVITPG 165

Query: 919  TEFMEMLSNKLQSYVSRRMREDPAWSDIKVILLDDKVPGEGEHKIMSFIRAQRALPGYDP 1098
            TEFM  LS  L+ Y+  R+  DP W +IKVIL D  VPGEGEHKIMS+IR  +  PGY+P
Sbjct: 166  TEFMATLSFALRYYIHVRLNSDPGWKNIKVILSDANVPGEGEHKIMSYIRCNKNHPGYNP 225

Query: 1099 NTTHCLYGLDADLIMLALATHEPHFCILREEVLSTNKGNSCHKIETRSLKSREWFKEHPL 1278
            NT HCLYGLDADLIML+LATHE HF ILRE V    +   C       L  +E  +    
Sbjct: 226  NTHHCLYGLDADLIMLSLATHEIHFSILREVVFFPGEEGKCF------LCGQEGHRAADC 279

Query: 1279 EKSISVSAIETEKLASCNEAPWSVDRKQVYQFLNVCILREYLALDLEIHNSDNKFECDLE 1458
            E  I     +T ++    EA   V  K+ Y+F+N+ ILREYL  D++I  +      +L+
Sbjct: 280  EGKIKR---KTGEMLDNTEADVVV--KKPYEFVNIWILREYLEHDMQIPGAKK----NLD 330

Query: 1459 KXXXXXXXXXXXAGNDFLPHMPTLEIHEGCIDLLMHVYKNEFQNLGGYLVDMQKVDDKKG 1638
            +            GNDFLPHMPTLEI EG I+LLM VYKN+F++   YL D  K++    
Sbjct: 331  RLIDDFIFICFFVGNDFLPHMPTLEIREGAIELLMSVYKNKFRSAKKYLTDSSKLN---- 386

Query: 1639 AYIKLKRVERFLLAVGAYEDEIFAKRSQLKERKLRRILADYREAKDDEKNQLEEGTSSDI 1818
                L+ VERF+ AVG YE++IF KR+Q+++R+  R   D  +A+D  ++   +   +  
Sbjct: 387  ----LRNVERFIKAVGMYENQIFQKRAQVQQRQSERFRRD--KARDKARDNARDNAQASR 440

Query: 1819 VGMNTIVELDGL----------------KISTSDHVDADTV----------LNNTKELKQ 1920
                 +V+LD L                ++S  D++    V          L+N ++LK 
Sbjct: 441  QFSGKLVQLDSLDEVSDSLHSSPSRKYLRLSLDDNIGVANVETENSLKAEELDNEEDLKF 500

Query: 1921 KLKENTRKQSDLFKDGAIGTDKVKLGSPGWKQRYYRVKFSAESTEEMEATRKAVVAKYSE 2100
            KLK+  R + D F+ G    DKVKL   GW++RYY  KF+A+S EEME  R+ VV KY+E
Sbjct: 501  KLKKLLRDKGDGFRSGNGEQDKVKLNKVGWRERYYEEKFAAKSVEEMEQIRRDVVLKYTE 560

Query: 2101 GLCWVLLYYFSGVPSWTWFYPFHYGPLASDMRGLSQTKVKFQKGVPFKPFDQLMGVLPPR 2280
            GLCW++ YY+ GV SW WFYP+HY P ASD++GL +  +KF+ G PFKPF+QL+ VLP  
Sbjct: 561  GLCWIMHYYYHGVCSWNWFYPYHYAPFASDLKGLEKLDIKFELGSPFKPFNQLLAVLPSA 620

Query: 2281 SSHALPESYKGLMIDENSSIIGFYPTDFETDVDGKRFMWQGICKLPFIEEDRLLTATSKL 2460
            S+HALPE Y+ LM + +S I  FYP DFE D++GKR+ WQGI KLPF+EE RLL A +++
Sbjct: 621  SAHALPECYRSLMTNPDSPIADFYPADFEIDMNGKRYSWQGISKLPFVEEKRLLEAAAQV 680

Query: 2461 ENGLKDHEKTRNIETLGRLFVRCSSEMAQQL-SCNGVRSSSERIKGAIMIESPMEGVKGT 2637
            E  L + E  RN      LFV  S  + + + S N   ++    + A +IE    G+   
Sbjct: 681  EKSLTNEEIRRNSALFDMLFVVASHPLGELIRSLNSRTNNLSNEERATIIEKIDPGLSDG 740

Query: 2638 MH---------LMP----------EDLIKVDDELCVFYETPRD------SQHIPRLLEGV 2742
            M+           P          ED++  +  +C  Y+ P D      +  IPRL    
Sbjct: 741  MNGYIASCGGDSQPSCFCSTVEGMEDVL-TNQVICAIYKLPEDIRGSEITHQIPRLA--- 796

Query: 2743 NIPEKMVNEEDIVE-TILWHQ 2802
             IP+K ++  D+    +LWH+
Sbjct: 797  -IPKKTISLVDLKSGGLLWHE 816



 Score = 67.4 bits (163), Expect(2) = e-176
 Identities = 34/80 (42%), Positives = 45/80 (56%), Gaps = 20/80 (25%)
 Frame = +2

Query: 308 MGVPSFYRWLVNKYP-------------------KIVVDAADHNTT-MEFDNFYLDMNGI 427
           MGVPSFYRWL+ +YP                    I +D++  N    E+DN YLDMNGI
Sbjct: 1   MGVPSFYRWLIQRYPLTIQEVIEEEPLEVNGGGVTIPIDSSKPNPNGYEYDNLYLDMNGI 60

Query: 428 IHPCFHPENTVIFSSYMFIF 487
           IHPCFHPE+    +++  +F
Sbjct: 61  IHPCFHPEDKPSPTTFTEVF 80