BLASTX nr result

ID: Scutellaria22_contig00000099 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Scutellaria22_contig00000099
         (806 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-l...   154   2e-35
gb|AFP74112.1| poly-A binding protein, partial [Nicotiana bentha...   152   1e-34
gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana taba...   152   1e-34
ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula...   150   3e-34
ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [...   150   4e-34

>ref|XP_004140705.1| PREDICTED: polyadenylate-binding protein 2-like [Cucumis sativus]
          Length = 654

 Score =  154 bits (389), Expect = 2e-35
 Identities = 75/93 (80%), Positives = 85/93 (91%), Gaps = 1/93 (1%)
 Frame = +3

Query: 183 SSGGAPFVT-SLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFGN 359
           ++GGA FVT SLYVGDLD+NVTDSQLYD+F+Q+G VVSVRVCRDLT+RRSLGYGYVN+ N
Sbjct: 20  ANGGANFVTTSLYVGDLDLNVTDSQLYDIFNQVGQVVSVRVCRDLTTRRSLGYGYVNYSN 79

Query: 360 PQDAERALMELNFTPLNGKHIRIMYSHRDPSVR 458
           PQDA RAL  LNFTPLNGK IR+MYSHRDPS+R
Sbjct: 80  PQDAARALDVLNFTPLNGKPIRVMYSHRDPSIR 112



 Score =  120 bits (301), Expect = 4e-25
 Identities = 60/74 (81%), Positives = 66/74 (89%)
 Frame = +2

Query: 584 CKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVYVGPFLRKQERDMSVDKT 763
           CKVA +SSGQS GYGFVQ+ +EESA KAIEKLNGMLLN KQVYVGPFLRKQERD  VDK+
Sbjct: 146 CKVALDSSGQSKGYGFVQFDNEESALKAIEKLNGMLLNDKQVYVGPFLRKQERDGVVDKS 205

Query: 764 KFTNVFVKNISEST 805
           KF NVFVKN+SE+T
Sbjct: 206 KFNNVFVKNLSETT 219


>gb|AFP74112.1| poly-A binding protein, partial [Nicotiana benthamiana]
          Length = 643

 Score =  152 bits (383), Expect = 1e-34
 Identities = 73/86 (84%), Positives = 81/86 (94%)
 Frame = +3

Query: 201 FVTSLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFGNPQDAERA 380
           FVTSLYVGDLDVNVTDSQLYDLF+Q+G VVSVRVCRDLTS+RSLGYGYVN+GNPQDA RA
Sbjct: 25  FVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARA 84

Query: 381 LMELNFTPLNGKHIRIMYSHRDPSVR 458
           L  LNFTPL+GK IRIMYS+RDP++R
Sbjct: 85  LEVLNFTPLHGKPIRIMYSNRDPTIR 110



 Score =  130 bits (327), Expect = 3e-28
 Identities = 63/74 (85%), Positives = 70/74 (94%)
 Frame = +2

Query: 584 CKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVYVGPFLRKQERDMSVDKT 763
           CKVA +SSGQS GYGFVQY S+E+AQKAIEKLNGMLLN KQVYVGPF+RKQERDM+VDKT
Sbjct: 144 CKVAVDSSGQSKGYGFVQYDSDEAAQKAIEKLNGMLLNDKQVYVGPFVRKQERDMAVDKT 203

Query: 764 KFTNVFVKNISEST 805
           +FTNVFVKN+SEST
Sbjct: 204 RFTNVFVKNLSEST 217


>gb|AAF66823.1|AF190655_1 poly(A)-binding protein [Nicotiana tabacum]
          Length = 649

 Score =  152 bits (383), Expect = 1e-34
 Identities = 73/86 (84%), Positives = 81/86 (94%)
 Frame = +3

Query: 201 FVTSLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFGNPQDAERA 380
           FVTSLYVGDLDVNVTDSQLYDLF+Q+G VVSVRVCRDLTS+RSLGYGYVN+GNPQDA RA
Sbjct: 25  FVTSLYVGDLDVNVTDSQLYDLFNQLGQVVSVRVCRDLTSQRSLGYGYVNYGNPQDAARA 84

Query: 381 LMELNFTPLNGKHIRIMYSHRDPSVR 458
           L  LNFTPL+GK IRIMYS+RDP++R
Sbjct: 85  LEVLNFTPLHGKPIRIMYSNRDPTIR 110



 Score =  129 bits (325), Expect = 6e-28
 Identities = 63/74 (85%), Positives = 69/74 (93%)
 Frame = +2

Query: 584 CKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVYVGPFLRKQERDMSVDKT 763
           CKVA +SSGQS GYGFVQY SEE+AQKAIEKLNGMLLN KQVYVGPF+RK ERDM+VDKT
Sbjct: 144 CKVAVDSSGQSKGYGFVQYDSEEAAQKAIEKLNGMLLNDKQVYVGPFVRKHERDMAVDKT 203

Query: 764 KFTNVFVKNISEST 805
           +FTNVFVKN+SEST
Sbjct: 204 RFTNVFVKNLSEST 217


>ref|XP_003607922.1| Poly(A)-binding protein [Medicago truncatula]
           gi|355508977|gb|AES90119.1| Poly(A)-binding protein
           [Medicago truncatula]
          Length = 654

 Score =  150 bits (379), Expect = 3e-34
 Identities = 74/93 (79%), Positives = 82/93 (88%), Gaps = 1/93 (1%)
 Frame = +3

Query: 183 SSGGAPFVT-SLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFGN 359
           + GG  FVT SLYVGDLD+NVTDSQLYDLF+Q+G VVSVRVCRDLT+RRSLGYGYVN+ N
Sbjct: 25  AGGGGNFVTTSLYVGDLDMNVTDSQLYDLFNQLGQVVSVRVCRDLTTRRSLGYGYVNYSN 84

Query: 360 PQDAERALMELNFTPLNGKHIRIMYSHRDPSVR 458
           PQDA RAL  LNFTPLN + IRIMYSHRDPS+R
Sbjct: 85  PQDAARALDVLNFTPLNNRPIRIMYSHRDPSIR 117



 Score =  118 bits (295), Expect = 2e-24
 Identities = 57/74 (77%), Positives = 65/74 (87%)
 Frame = +2

Query: 584 CKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVYVGPFLRKQERDMSVDKT 763
           CKVA + SGQS GYGFVQ+ +EE+AQKAIEKLNGMLLN KQVYVGPFLRKQER+ + D+ 
Sbjct: 151 CKVAVDGSGQSKGYGFVQFDTEEAAQKAIEKLNGMLLNDKQVYVGPFLRKQERESTGDRA 210

Query: 764 KFTNVFVKNISEST 805
           KF NVFVKN+SEST
Sbjct: 211 KFNNVFVKNLSEST 224


>ref|XP_002285190.1| PREDICTED: polyadenylate-binding protein 2 [Vitis vinifera]
           gi|147839912|emb|CAN65906.1| hypothetical protein
           VITISV_004873 [Vitis vinifera]
          Length = 648

 Score =  150 bits (378), Expect = 4e-34
 Identities = 75/92 (81%), Positives = 82/92 (89%), Gaps = 1/92 (1%)
 Frame = +3

Query: 186 SGGAPFVT-SLYVGDLDVNVTDSQLYDLFSQMGDVVSVRVCRDLTSRRSLGYGYVNFGNP 362
           +GG  FVT SLYVGDL++NV DSQLYDLFSQMG VVSVRVCRDL++RRSLGYGYVN+ NP
Sbjct: 22  AGGNQFVTTSLYVGDLELNVNDSQLYDLFSQMGAVVSVRVCRDLSTRRSLGYGYVNYSNP 81

Query: 363 QDAERALMELNFTPLNGKHIRIMYSHRDPSVR 458
           QDA RAL  LNFTPLNGK IRIMYSHRDPS+R
Sbjct: 82  QDAARALDVLNFTPLNGKPIRIMYSHRDPSIR 113



 Score =  112 bits (280), Expect = 1e-22
 Identities = 53/72 (73%), Positives = 65/72 (90%)
 Frame = +2

Query: 584 CKVATNSSGQSLGYGFVQYASEESAQKAIEKLNGMLLNGKQVYVGPFLRKQERDMSVDKT 763
           CKVAT++SG S G+GFVQ+ SEE+AQKAI+KLNGMLLN KQV+VGPF+RKQER+ +++K 
Sbjct: 147 CKVATDASGMSKGHGFVQFDSEEAAQKAIDKLNGMLLNDKQVFVGPFVRKQERESTINKE 206

Query: 764 KFTNVFVKNISE 799
           KF NVFVKNISE
Sbjct: 207 KFNNVFVKNISE 218


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