BLASTX nr result
ID: Salvia21_contig00041638
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Salvia21_contig00041638
(582 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containi... 266 2e-69
emb|CBI27235.3| unnamed protein product [Vitis vinifera] 250 1e-64
ref|XP_002532711.1| pentatricopeptide repeat-containing protein,... 240 1e-61
ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|2... 236 3e-60
ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago t... 230 1e-58
>ref|XP_002275546.2| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
chloroplastic-like [Vitis vinifera]
Length = 896
Score = 266 bits (679), Expect = 2e-69
Identities = 129/193 (66%), Positives = 160/193 (82%)
Frame = +3
Query: 3 QLHCYSLRVDERKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQNDR 182
QLH YSLRV ++KTFT+N+LMAMYAKLGRVDD+K +FE F DMVSWNT+IS+FSQ+DR
Sbjct: 218 QLHGYSLRVGDQKTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDR 277
Query: 183 FYEGLEYFRAMNDEGFKPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDFMRNSFVTS 362
F E L +FR M EG + DGVTI+SVLPACSHLE L++GKEIHA+VLRN+D + NSFV S
Sbjct: 278 FSEALAFFRLMVLEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGS 337
Query: 363 ALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVSGLF 542
ALVDMYCNC+QV SGRRVFD L R++ WNAM +GY +NG +A++LF++++ V+GL
Sbjct: 338 ALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLL 397
Query: 543 PNPTTMASVLPAC 581
PN TTMASV+PAC
Sbjct: 398 PNTTTMASVMPAC 410
Score = 118 bits (296), Expect = 6e-25
Identities = 66/179 (36%), Positives = 107/179 (59%), Gaps = 3/179 (1%)
Frame = +3
Query: 54 NSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQNDRFYEGLEYFRAMNDEGFK 233
N+L+ MY K G + D +F+ D VSWN+ I+A + +++ + LE FRAM E +
Sbjct: 132 NTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQALEAFRAMQMENME 191
Query: 234 PDGVTISSVLPACSHLEL---LNLGKEIHAFVLRNDDFMRNSFVTSALVDMYCNCKQVMS 404
T+ SV ACS+L + L LGK++H + LR D + +F +AL+ MY +V
Sbjct: 192 LSSFTLVSVALACSNLGVMHGLRLGKQLHGYSLRVGD--QKTFTNNALMAMYAKLGRVDD 249
Query: 405 GRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVSGLFPNPTTMASVLPAC 581
+ +F+S +DR + +WN M + ++Q+ + EA + F +LMV+ G+ + T+ASVLPAC
Sbjct: 250 SKALFESFVDRDMVSWNTMISSFSQSDRFSEA-LAFFRLMVLEGVELDGVTIASVLPAC 307
Score = 108 bits (269), Expect = 9e-22
Identities = 69/216 (31%), Positives = 114/216 (52%), Gaps = 24/216 (11%)
Frame = +3
Query: 6 LHCYSLRVDERKT-FTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQNDR 182
+H Y++++ ++ + N+LM MY+++G++D ++ IF+ D VSWNT+I+ + + R
Sbjct: 422 IHGYAVKLGFKEDRYVQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGR 481
Query: 183 FYEGLEYFRAM-------------NDE----GFKPDGVTISSVLPACSHLELLNLGKEIH 311
+ L M ND+ +KP+ +T+ +VLP C+ L + GKEIH
Sbjct: 482 YSNALVLLHEMQRMENTKDVKKDDNDDEKGGPYKPNAITLMTVLPGCAALAAIAKGKEIH 541
Query: 312 AFVLRNDDFMRNSFVT--SALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNG 485
A+ +RN M S +T SALVDMY C + RRVF+ ++ + TWN + +G
Sbjct: 542 AYAIRN---MLASDITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHG 598
Query: 486 FYLEAVMLFMKLMVVSG----LFPNPTTMASVLPAC 581
EA+ LF ++ +G PN T +V AC
Sbjct: 599 KGEEALELFKNMVAEAGRGGEAKPNEVTFITVFAAC 634
Score = 89.7 bits (221), Expect = 3e-16
Identities = 57/212 (26%), Positives = 101/212 (47%), Gaps = 19/212 (8%)
Frame = +3
Query: 3 QLHCYSLRVDE--RKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQN 176
++H Y LR ++ +F ++L+ MY +V+ + +F+ + WN +IS +++N
Sbjct: 318 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 377
Query: 177 DRFYEGLEYFRAM-NDEGFKPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDFMRNSF 353
+ L F M G P+ T++SV+PAC H E + + IH + ++ F + +
Sbjct: 378 GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHCEAFSNKESIHGYAVKL-GFKEDRY 436
Query: 354 VTSALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVS 533
V +AL+DMY ++ +FDS R +WN M GY +G Y A++L ++ +
Sbjct: 437 VQNALMDMYSRMGKMDISETIFDSMEVRDRVSWNTMITGYVLSGRYSNALVLLHEMQRME 496
Query: 534 G----------------LFPNPTTMASVLPAC 581
PN T+ +VLP C
Sbjct: 497 NTKDVKKDDNDDEKGGPYKPNAITLMTVLPGC 528
Score = 59.7 bits (143), Expect = 3e-07
Identities = 40/147 (27%), Positives = 71/147 (48%)
Frame = +3
Query: 141 SWNTIISAFSQNDRFYEGLEYFRAMNDEGFKPDGVTISSVLPACSHLELLNLGKEIHAFV 320
SW + + ++++ F E + + M G +PD +VL A S L+ L G++IHA
Sbjct: 59 SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118
Query: 321 LRNDDFMRNSFVTSALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEA 500
++ + V + LV+MY C + +VFD DR +WN+ A + + +A
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDVCKVFDRITDRDQVSWNSFIAALCRFEKWEQA 178
Query: 501 VMLFMKLMVVSGLFPNPTTMASVLPAC 581
+ F + M + + + T+ SV AC
Sbjct: 179 LEAF-RAMQMENMELSSFTLVSVALAC 204
>emb|CBI27235.3| unnamed protein product [Vitis vinifera]
Length = 696
Score = 250 bits (639), Expect = 1e-64
Identities = 121/181 (66%), Positives = 150/181 (82%)
Frame = +3
Query: 39 KTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQNDRFYEGLEYFRAMN 218
KTFT+N+LMAMYAKLGRVDD+K +FE F DMVSWNT+IS+FSQ+DRF E L +FR M
Sbjct: 147 KTFTNNALMAMYAKLGRVDDSKALFESFVDRDMVSWNTMISSFSQSDRFSEALAFFRLMV 206
Query: 219 DEGFKPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDFMRNSFVTSALVDMYCNCKQV 398
EG + DGVTI+SVLPACSHLE L++GKEIHA+VLRN+D + NSFV SALVDMYCNC+QV
Sbjct: 207 LEGVELDGVTIASVLPACSHLERLDVGKEIHAYVLRNNDLIENSFVGSALVDMYCNCRQV 266
Query: 399 MSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVSGLFPNPTTMASVLPA 578
SGRRVFD L R++ WNAM +GY +NG +A++LF++++ V+GL PN TTMASV+PA
Sbjct: 267 ESGRRVFDHILGRRIELWNAMISGYARNGLDEKALILFIEMIKVAGLLPNTTTMASVMPA 326
Query: 579 C 581
C
Sbjct: 327 C 327
Score = 97.4 bits (241), Expect = 2e-18
Identities = 66/203 (32%), Positives = 105/203 (51%), Gaps = 10/203 (4%)
Frame = +3
Query: 3 QLHCYSLRVDE--RKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQN 176
++H Y LR ++ +F ++L+ MY +V+ + +F+ + WN +IS +++N
Sbjct: 235 EIHAYVLRNNDLIENSFVGSALVDMYCNCRQVESGRRVFDHILGRRIELWNAMISGYARN 294
Query: 177 DRFYEGLEYFRAM-NDEGFKPDGVTISSVLPACSH-LELLNLGKEIHAFVLRNDDFMRNS 350
+ L F M G P+ T++SV+PAC H L + GKEIHA+ +RN M S
Sbjct: 295 GLDEKALILFIEMIKVAGLLPNTTTMASVMPACVHSLAAIAKGKEIHAYAIRN---MLAS 351
Query: 351 FVT--SALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLM 524
+T SALVDMY C + RRVF+ ++ + TWN + +G EA+ LF ++
Sbjct: 352 DITVGSALVDMYAKCGCLNLSRRVFNEMPNKNVITWNVLIMACGMHGKGEEALELFKNMV 411
Query: 525 VVSG----LFPNPTTMASVLPAC 581
+G PN T +V AC
Sbjct: 412 AEAGRGGEAKPNEVTFITVFAAC 434
Score = 75.1 bits (183), Expect = 8e-12
Identities = 48/167 (28%), Positives = 84/167 (50%), Gaps = 20/167 (11%)
Frame = +3
Query: 141 SWNTIISAFSQNDRFYEGLEYFRAMNDEGFKPDGVTISSVLPACSHLELLNLGKEIHAFV 320
SW + + ++++ F E + + M G +PD +VL A S L+ L G++IHA
Sbjct: 59 SWVDALRSRTRSNDFREAISTYIEMTVSGARPDNFAFPAVLKAVSGLQDLKTGEQIHAAA 118
Query: 321 LRNDDFMRNSFVTSALVDMYCNC--------------------KQVMSGRRVFDSALDRK 440
++ + V + LV+MY C +V + +F+S +DR
Sbjct: 119 VKFGYGSSSVTVANTLVNMYGKCGGIGDKTFTNNALMAMYAKLGRVDDSKALFESFVDRD 178
Query: 441 LGTWNAMFAGYTQNGFYLEAVMLFMKLMVVSGLFPNPTTMASVLPAC 581
+ +WN M + ++Q+ + EA + F +LMV+ G+ + T+ASVLPAC
Sbjct: 179 MVSWNTMISSFSQSDRFSEA-LAFFRLMVLEGVELDGVTIASVLPAC 224
>ref|XP_002532711.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223527557|gb|EEF29678.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 679
Score = 240 bits (612), Expect = 1e-61
Identities = 117/192 (60%), Positives = 146/192 (76%)
Frame = +3
Query: 3 QLHCYSLRVDERKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQNDR 182
Q+H Y R TFT+N+LM MYA LGR+DDAK +F+ F +++SWNT+IS+FSQN+R
Sbjct: 203 QIHGYCFRNGHWSTFTNNALMTMYANLGRLDDAKFLFKLFEDRNLISWNTMISSFSQNER 262
Query: 183 FYEGLEYFRAMNDEGFKPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDFMRNSFVTS 362
F E L R M EG KPDGVT++SVLPACS+LE+L GKEIHA+ LR+ D + NSFV S
Sbjct: 263 FVEALMSLRYMVLEGVKPDGVTLASVLPACSYLEMLGTGKEIHAYALRSGDLIENSFVGS 322
Query: 363 ALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVSGLF 542
ALVDMYCNC QV SGRRVFD L+RK G WNAM AGY QN +A+MLF++++ V+GL
Sbjct: 323 ALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQNEHDEKALMLFIEMVAVAGLC 382
Query: 543 PNPTTMASVLPA 578
PN TTMAS++PA
Sbjct: 383 PNTTTMASIVPA 394
Score = 121 bits (304), Expect = 7e-26
Identities = 69/179 (38%), Positives = 106/179 (59%), Gaps = 3/179 (1%)
Frame = +3
Query: 54 NSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQNDRFYEGLEYFRAMNDEGFK 233
NSL+ Y K +DD +F+ D+VSWN++ISAF + + LE FR M E +
Sbjct: 117 NSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELALEAFRFMLAEDLE 176
Query: 234 PDGVTISSVLPACSHL---ELLNLGKEIHAFVLRNDDFMRNSFVTSALVDMYCNCKQVMS 404
P T+ S + ACS+L E L LGK+IH + RN + ++F +AL+ MY N ++
Sbjct: 177 PSSFTLVSPVIACSNLRKHEGLRLGKQIHGYCFRNGHW--STFTNNALMTMYANLGRLDD 234
Query: 405 GRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVSGLFPNPTTMASVLPAC 581
+ +F DR L +WN M + ++QN ++EA+M ++ MV+ G+ P+ T+ASVLPAC
Sbjct: 235 AKFLFKLFEDRNLISWNTMISSFSQNERFVEALM-SLRYMVLEGVKPDGVTLASVLPAC 292
Score = 112 bits (281), Expect = 3e-23
Identities = 72/210 (34%), Positives = 111/210 (52%), Gaps = 18/210 (8%)
Frame = +3
Query: 6 LHCYSLRVD-ERKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQNDR 182
+H Y ++ D ER + N+LM MY+++ +++ +K IF+ D+VSWNT+I+ + +
Sbjct: 407 IHGYVIKRDLERDRYVQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGC 466
Query: 183 FYEGLEYFRAMN--DEG-----------FKPDGVTISSVLPACSHLELLNLGKEIHAFVL 323
+ + L M +EG FKP+ +T+ +VLP C+ L L GKEIHA+ +
Sbjct: 467 YNDALLMLHEMQHANEGINKHDGDKQACFKPNSITLMTVLPGCASLAALAKGKEIHAYAV 526
Query: 324 RNDDFMRNSFVTSALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAV 503
RN V SALVDMY C + RRVFD + + TWN + Y +G EA+
Sbjct: 527 RN-ALASEVTVGSALVDMYAKCGCLNLSRRVFDQMPIKNVITWNVIVMAYGMHGNGEEAL 585
Query: 504 MLFMKLMV----VSGLFPNPTTMASVLPAC 581
LF ++ V + P TM ++L AC
Sbjct: 586 ELFKDMVAKGDNVGEVKPTEVTMIAILAAC 615
Score = 96.3 bits (238), Expect = 3e-18
Identities = 56/208 (26%), Positives = 105/208 (50%), Gaps = 15/208 (7%)
Frame = +3
Query: 3 QLHCYSLRVDE--RKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQN 176
++H Y+LR + +F ++L+ MY G+V + +F+ WN +I+ ++QN
Sbjct: 303 EIHAYALRSGDLIENSFVGSALVDMYCNCGQVGSGRRVFDGILERKTGLWNAMIAGYAQN 362
Query: 177 DRFYEGLEYFRAMND-EGFKPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDFMRNSF 353
+ + L F M G P+ T++S++PA + E + IH +V++ D R+ +
Sbjct: 363 EHDEKALMLFIEMVAVAGLCPNTTTMASIVPASARCESFFSKESIHGYVIKRD-LERDRY 421
Query: 354 VTSALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVS 533
V +AL+DMY +++ + +FDS R + +WN M GY +G Y +A+++ ++ +
Sbjct: 422 VQNALMDMYSRMRKMEISKTIFDSMEVRDIVSWNTMITGYVISGCYNDALLMLHEMQHAN 481
Query: 534 G------------LFPNPTTMASVLPAC 581
PN T+ +VLP C
Sbjct: 482 EGINKHDGDKQACFKPNSITLMTVLPGC 509
Score = 65.1 bits (157), Expect = 8e-09
Identities = 41/147 (27%), Positives = 75/147 (51%)
Frame = +3
Query: 141 SWNTIISAFSQNDRFYEGLEYFRAMNDEGFKPDGVTISSVLPACSHLELLNLGKEIHAFV 320
SW + ++++ F E + + M G PD VL A + L+ LNLGK+IHA V
Sbjct: 44 SWIESLRFNTRSNLFREAISTYVDMILSGVSPDSYAFPVVLKAVTGLQDLNLGKQIHAHV 103
Query: 321 LRNDDFMRNSFVTSALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEA 500
++ + + ++LV+ Y C ++ +VFD +R L +WN++ + + + + A
Sbjct: 104 VKYGYESSSVAIANSLVNFYGKCSELDDVYKVFDRINERDLVSWNSLISAFCRAQEWELA 163
Query: 501 VMLFMKLMVVSGLFPNPTTMASVLPAC 581
+ F + M+ L P+ T+ S + AC
Sbjct: 164 LEAF-RFMLAEDLEPSSFTLVSPVIAC 189
>ref|XP_002299387.1| predicted protein [Populus trichocarpa] gi|222846645|gb|EEE84192.1|
predicted protein [Populus trichocarpa]
Length = 814
Score = 236 bits (601), Expect = 3e-60
Identities = 115/192 (59%), Positives = 145/192 (75%)
Frame = +3
Query: 3 QLHCYSLRVDERKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQNDR 182
Q+H R +TF++N+LMAMYAKLGR+DDAK + F D+V+WN++IS+FSQN+R
Sbjct: 137 QIHGCCFRKGHWRTFSNNALMAMYAKLGRLDDAKSLLVLFEDRDLVTWNSMISSFSQNER 196
Query: 183 FYEGLEYFRAMNDEGFKPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDFMRNSFVTS 362
F E L + R M EG KPDGVT +SVLPACSHL+LL GKEIHA+ LR DD + NSFV S
Sbjct: 197 FMEALMFLRLMVLEGVKPDGVTFASVLPACSHLDLLRTGKEIHAYALRTDDVIENSFVGS 256
Query: 363 ALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVSGLF 542
ALVDMYCNC QV SGR VFDS LDRK+G WNAM AGY Q+ +A+MLF+++ +GL+
Sbjct: 257 ALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQSEHDEKALMLFIEMEAAAGLY 316
Query: 543 PNPTTMASVLPA 578
N TTM+S++PA
Sbjct: 317 SNATTMSSIVPA 328
Score = 120 bits (302), Expect = 1e-25
Identities = 70/180 (38%), Positives = 107/180 (59%), Gaps = 3/180 (1%)
Frame = +3
Query: 51 DNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQNDRFYEGLEYFRAMNDEGF 230
DN+L+ MY K G + DA +F+ D VSWN+IISA + + + ++ FR M EGF
Sbjct: 50 DNTLVNMYGKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAFRLMLMEGF 109
Query: 231 KPDGVTISSVLPACSHL---ELLNLGKEIHAFVLRNDDFMRNSFVTSALVDMYCNCKQVM 401
+P T+ S+ ACS+L + L LGK+IH R + +F +AL+ MY ++
Sbjct: 110 EPSSFTLVSMALACSNLRKRDGLWLGKQIHGCCFRKGHW--RTFSNNALMAMYAKLGRLD 167
Query: 402 SGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVSGLFPNPTTMASVLPAC 581
+ + DR L TWN+M + ++QN ++EA+M F++LMV+ G+ P+ T ASVLPAC
Sbjct: 168 DAKSLLVLFEDRDLVTWNSMISSFSQNERFMEALM-FLRLMVLEGVKPDGVTFASVLPAC 226
Score = 104 bits (260), Expect = 9e-21
Identities = 72/206 (34%), Positives = 105/206 (50%), Gaps = 23/206 (11%)
Frame = +3
Query: 33 ERKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAF-------------SQ 173
E + N+L+ MY+++G + +K IF+ D+VSWNTII+++ +
Sbjct: 351 ETNRYLQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHE 410
Query: 174 NDRFYEGLEYFRAMNDEG---FKPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDFMR 344
R E Y NDE FKP+ +T+ +VLP C+ L L GKEIHA+ +RN +
Sbjct: 411 MQRIEEKSTYDGDYNDEKQVPFKPNSITLMTVLPGCASLSALAKGKEIHAYAIRN---LL 467
Query: 345 NSFVT--SALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMK 518
S VT SALVDMY C + RRVFD R + TWN + Y +G E++ LF +
Sbjct: 468 ASQVTVGSALVDMYAKCGCLNLARRVFDQMPIRNVITWNVIIMAYGMHGKGKESLELF-E 526
Query: 519 LMVVSG-----LFPNPTTMASVLPAC 581
MV G + P T ++ +C
Sbjct: 527 DMVAEGAKGGEVKPTEVTFIALFASC 552
Score = 94.4 bits (233), Expect = 1e-17
Identities = 54/211 (25%), Positives = 105/211 (49%), Gaps = 18/211 (8%)
Frame = +3
Query: 3 QLHCYSLRVDE--RKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQN 176
++H Y+LR D+ +F ++L+ MY G+V+ +++F+ + WN +I+ ++Q+
Sbjct: 237 EIHAYALRTDDVIENSFVGSALVDMYCNCGQVESGRLVFDSVLDRKIGLWNAMIAGYAQS 296
Query: 177 DRFYEGLEYFRAMNDE-GFKPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDFMRNSF 353
+ + L F M G + T+SS++PA E ++ + IH +V++ N +
Sbjct: 297 EHDEKALMLFIEMEAAAGLYSNATTMSSIVPAYVRCEGISRKEGIHGYVIKR-GLETNRY 355
Query: 354 VTSALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVS 533
+ +AL+DMY + + +R+FDS DR + +WN + Y G +A++L ++ +
Sbjct: 356 LQNALIDMYSRMGDIKTSKRIFDSMEDRDIVSWNTIITSYVICGRSSDALLLLHEMQRIE 415
Query: 534 ---------------GLFPNPTTMASVLPAC 581
PN T+ +VLP C
Sbjct: 416 EKSTYDGDYNDEKQVPFKPNSITLMTVLPGC 446
Score = 60.5 bits (145), Expect = 2e-07
Identities = 40/127 (31%), Positives = 65/127 (51%), Gaps = 4/127 (3%)
Frame = +3
Query: 213 MNDEGFKPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDFMRNSF----VTSALVDMY 380
M GF PD +VL A + ++ L LGK+IHA V + F SF + + LV+MY
Sbjct: 1 MIGSGFSPDNFAFPAVLKAVAGIQELYLGKQIHAHVFK---FGYGSFSSVTIDNTLVNMY 57
Query: 381 CNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVSGLFPNPTTM 560
C + +VFD +R +WN++ + + + A+ F +LM++ G P+ T+
Sbjct: 58 GKCGGLGDAYKVFDRITERDQVSWNSIISALCRFEEWEVAIKAF-RLMLMEGFEPSSFTL 116
Query: 561 ASVLPAC 581
S+ AC
Sbjct: 117 VSMALAC 123
>ref|XP_003594868.1| Pentatricopeptide repeat protein [Medicago truncatula]
gi|355483916|gb|AES65119.1| Pentatricopeptide repeat
protein [Medicago truncatula]
Length = 874
Score = 230 bits (587), Expect = 1e-58
Identities = 112/193 (58%), Positives = 140/193 (72%)
Frame = +3
Query: 3 QLHCYSLRVDERKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQNDR 182
Q+H + LR + +TFT+N+L+ MYAKLGRV +AK +F+ F D+VSWNTIIS+ SQNDR
Sbjct: 208 QVHAFVLRNGDWRTFTNNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDR 267
Query: 183 FYEGLEYFRAMNDEGFKPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDFMRNSFVTS 362
F E L Y M G +P+GVT++SVLPACSHLE+L GKEIHAFVL N+D + NSFV
Sbjct: 268 FEEALLYLHVMLQSGVRPNGVTLASVLPACSHLEMLGCGKEIHAFVLMNNDLIENSFVGC 327
Query: 363 ALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVSGLF 542
ALVDMYCNCKQ GR VFD R + WNAM AGY +N F EA+ LF++++ GL
Sbjct: 328 ALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRNEFDYEAIELFVEMVFELGLS 387
Query: 543 PNPTTMASVLPAC 581
PN T++SVLPAC
Sbjct: 388 PNSVTLSSVLPAC 400
Score = 127 bits (320), Expect = 1e-27
Identities = 76/195 (38%), Positives = 115/195 (58%), Gaps = 2/195 (1%)
Frame = +3
Query: 3 QLHCYSLRVDER-KTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQND 179
QLH + + + T NSL+ MY K G +D A+ +F+ + D VSWN++I+A + +
Sbjct: 106 QLHAHVFKFGQALPTAVPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAACRFE 165
Query: 180 RFYEGLEYFRAMNDEGFKPDGVTISSVLPACSHL-ELLNLGKEIHAFVLRNDDFMRNSFV 356
+ + FR M E P T+ SV ACS+L L LGK++HAFVLRN D+ +F
Sbjct: 166 EWELAVHLFRLMLLENVGPTSFTLVSVAHACSNLINGLLLGKQVHAFVLRNGDW--RTFT 223
Query: 357 TSALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVSG 536
+ALV MY +V + +FD D+ L +WN + + +QN + EA +L++ +M+ SG
Sbjct: 224 NNALVTMYAKLGRVYEAKTLFDVFDDKDLVSWNTIISSLSQNDRFEEA-LLYLHVMLQSG 282
Query: 537 LFPNPTTMASVLPAC 581
+ PN T+ASVLPAC
Sbjct: 283 VRPNGVTLASVLPAC 297
Score = 98.6 bits (244), Expect = 7e-19
Identities = 60/182 (32%), Positives = 95/182 (52%), Gaps = 18/182 (9%)
Frame = +3
Query: 33 ERKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQNDRFYEGLEYFRA 212
E+ + N+LM MY+++GR++ A+ IF D+VSWNT+I+ + R + L
Sbjct: 422 EKDKYVQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHD 481
Query: 213 M----------------NDEGF--KPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDF 338
M +++ F KP+ VT+ +VLP C+ L L GKEIHA+ ++
Sbjct: 482 MQRGQAEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGCAALAALGKGKEIHAYAVK-QML 540
Query: 339 MRNSFVTSALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMK 518
++ V SALVDMY C + R VF+ R + TWN + Y +G EA+ LF +
Sbjct: 541 SKDVAVGSALVDMYAKCGCLNLSRTVFEQMSVRNVITWNVLIMAYGMHGKGEEALKLFRR 600
Query: 519 LM 524
++
Sbjct: 601 MV 602
Score = 87.8 bits (216), Expect = 1e-15
Identities = 58/213 (27%), Positives = 102/213 (47%), Gaps = 20/213 (9%)
Frame = +3
Query: 3 QLHCYSLRVDE--RKTFTDNSLMAMYAKLGRVDDAKIIFEWFAHHDMVSWNTIISAFSQN 176
++H + L ++ +F +L+ MY + + +++F+ + WN +I+ + +N
Sbjct: 308 EIHAFVLMNNDLIENSFVGCALVDMYCNCKQPEKGRLVFDGMFRRTIAVWNAMIAGYVRN 367
Query: 177 DRFYEGLEYFRAMNDE-GFKPDGVTISSVLPACSHLELLNLGKEIHAFVLRNDDFMRNSF 353
+ YE +E F M E G P+ VT+SSVLPAC E + IH+ V++ F ++ +
Sbjct: 368 EFDYEAIELFVEMVFELGLSPNSVTLSSVLPACVRCESFLDKEGIHSCVVKWG-FEKDKY 426
Query: 354 VTSALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGYTQNGFYLEAVMLFMKLMVVS 533
V +AL+DMY ++ R +F S + + +WN M GY G + +A+ L +
Sbjct: 427 VQNALMDMYSRMGRIEIARSIFGSMNRKDIVSWNTMITGYVVCGRHDDALNLLHDMQRGQ 486
Query: 534 G-----------------LFPNPTTMASVLPAC 581
L PN T+ +VLP C
Sbjct: 487 AEHRINTFDDYEDNKNFPLKPNSVTLMTVLPGC 519
Score = 71.6 bits (174), Expect = 9e-11
Identities = 47/156 (30%), Positives = 78/156 (50%)
Frame = +3
Query: 114 EWFAHHDMVSWNTIISAFSQNDRFYEGLEYFRAMNDEGFKPDGVTISSVLPACSHLELLN 293
EW +H + S + F++ + + M G PD +VL A + ++ LN
Sbjct: 51 EWVSH--------LRSQTQSSSTFHQAISTYTNMVTAGVPPDNFAFPAVLKATAGIQDLN 102
Query: 294 LGKEIHAFVLRNDDFMRNSFVTSALVDMYCNCKQVMSGRRVFDSALDRKLGTWNAMFAGY 473
LGK++HA V + + + V ++LV+MY C + + RRVFD +R +WN+M
Sbjct: 103 LGKQLHAHVFKFGQALPTA-VPNSLVNMYGKCGDIDAARRVFDEITNRDDVSWNSMINAA 161
Query: 474 TQNGFYLEAVMLFMKLMVVSGLFPNPTTMASVLPAC 581
+ + AV LF +LM++ + P T+ SV AC
Sbjct: 162 CRFEEWELAVHLF-RLMLLENVGPTSFTLVSVAHAC 196