BLASTX nr result

ID: Salvia21_contig00041570 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00041570
         (357 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002313634.1| predicted protein [Populus trichocarpa] gi|2...    66   3e-09
ref|XP_002515850.1| conserved hypothetical protein [Ricinus comm...    59   5e-07
ref|XP_003592245.1| Double-stranded RNA binding protein [Medicag...    56   3e-06
ref|XP_003601344.1| Double-stranded RNA binding protein [Medicag...    55   6e-06

>ref|XP_002313634.1| predicted protein [Populus trichocarpa] gi|222850042|gb|EEE87589.1|
           predicted protein [Populus trichocarpa]
          Length = 484

 Score = 66.2 bits (160), Expect = 3e-09
 Identities = 28/58 (48%), Positives = 41/58 (70%)
 Frame = +3

Query: 129 SYPQPKHESIGESEMKSSYLLCNRVRVFTCMPNVALPEGTLVLPISEDRWAMVALEFP 302
           S P     ++ ++  + SYLLCNRVRV+ C P++ALP G  V+PIS+++W  V+LEFP
Sbjct: 422 SAPTISDSNVRKATRQRSYLLCNRVRVYPCYPDIALPNGITVMPISDNQWVAVSLEFP 479


>ref|XP_002515850.1| conserved hypothetical protein [Ricinus communis]
           gi|223545005|gb|EEF46519.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 284

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 25/51 (49%), Positives = 35/51 (68%)
 Frame = +3

Query: 153 SIGESEMKSSYLLCNRVRVFTCMPNVALPEGTLVLPISEDRWAMVALEFPN 305
           ++G+ E   SYLLC RVR++   PN+  P+G  VLPI+++ W  V LEFPN
Sbjct: 230 NMGKPEAPESYLLCERVRMYPSYPNIDFPKGITVLPITDNIWVAVNLEFPN 280


>ref|XP_003592245.1| Double-stranded RNA binding protein [Medicago truncatula]
           gi|357462121|ref|XP_003601342.1| Double-stranded RNA
           binding protein [Medicago truncatula]
           gi|355481293|gb|AES62496.1| Double-stranded RNA binding
           protein [Medicago truncatula]
           gi|355490390|gb|AES71593.1| Double-stranded RNA binding
           protein [Medicago truncatula]
          Length = 424

 Score = 56.2 bits (134), Expect = 3e-06
 Identities = 27/69 (39%), Positives = 39/69 (56%), Gaps = 5/69 (7%)
 Frame = +3

Query: 114 ESCDISYPQPKHESIGESEMK-----SSYLLCNRVRVFTCMPNVALPEGTLVLPISEDRW 278
           +S  +S+ +    +I +S M      S+YLLC+R  V+T  P++  PE   VLP  ED+W
Sbjct: 349 KSSPLSHTELASSTISDSNMTMTCNTSNYLLCDRFNVYTNFPDILFPEDITVLPFDEDKW 408

Query: 279 AMVALEFPN 305
               LEFPN
Sbjct: 409 VAACLEFPN 417


>ref|XP_003601344.1| Double-stranded RNA binding protein [Medicago truncatula]
           gi|355490392|gb|AES71595.1| Double-stranded RNA binding
           protein [Medicago truncatula]
          Length = 372

 Score = 55.1 bits (131), Expect = 6e-06
 Identities = 25/62 (40%), Positives = 40/62 (64%), Gaps = 4/62 (6%)
 Frame = +3

Query: 129 SYPQPKHESIGESEMKS----SYLLCNRVRVFTCMPNVALPEGTLVLPISEDRWAMVALE 296
           S P P ++ +  S+ K+    SY+L N+++V+T  P++  PEG  V+PI ED+W   +LE
Sbjct: 310 SLPLPPNKKMKISKAKTPNTNSYMLGNKLKVYTSFPDIVFPEGITVVPIGEDKWIAASLE 369

Query: 297 FP 302
           FP
Sbjct: 370 FP 371


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