BLASTX nr result

ID: Salvia21_contig00040903 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00040903
         (406 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002525492.1| pentatricopeptide repeat-containing protein,...   163   2e-38
ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   160   8e-38
ref|XP_002327307.1| predicted protein [Populus trichocarpa] gi|2...   160   1e-37
ref|NP_177298.1| pentatricopeptide repeat-containing protein [Ar...   159   2e-37
dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]           159   2e-37

>ref|XP_002525492.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223535171|gb|EEF36850.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 542

 Score =  163 bits (412), Expect = 2e-38
 Identities = 76/131 (58%), Positives = 106/131 (80%)
 Frame = +3

Query: 9   DDFYPDCYVFTVLLKACANLVTESAAAAVHGQVVRAGFLNVLELDNALIHAYSRCGSVDN 188
           +D  PD Y F+++LKACA L TE  A  VH +V++AGF   + L+NALIHAY+RCGS+  
Sbjct: 366 EDLAPDWYTFSIVLKACAGLGTERQALTVHSRVIKAGFEGDVVLENALIHAYARCGSIFL 425

Query: 189 AERVFHDMSSRDVVSWNSMLKAYAVHGKAETALDLFAQMDVAPDEATFVALLTSCSHAGM 368
           +++VF +M  R++VSWNSMLKAYA+HG+A+ AL LF++M+V PD AT VALL++CSHAGM
Sbjct: 426 SKQVFDEMRMRNLVSWNSMLKAYALHGQAKEALHLFSEMNVRPDSATMVALLSACSHAGM 485

Query: 369 VKEGIEMFDTM 401
           V+EGI++F++M
Sbjct: 486 VEEGIKIFESM 496



 Score = 57.8 bits (138), Expect = 9e-07
 Identities = 27/74 (36%), Positives = 45/74 (60%), Gaps = 2/74 (2%)
 Frame = +3

Query: 144 NALIHAYSRCGSVDNAERVFHDMSSRDVVSWNSMLKAYAVHGKAETALDLFAQ--MDVAP 317
           N LI+ Y++CG ++ A ++F +M  R+VVSW +++  YA HG+A     LF+   M   P
Sbjct: 105 NHLINMYAKCGDLEYARQLFAEMPERNVVSWTALISGYAQHGQAYECSRLFSSMLMHCRP 164

Query: 318 DEATFVALLTSCSH 359
           +E    + L+SC +
Sbjct: 165 NEFALTSNLSSCDY 178


>ref|XP_003516739.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
           protein At1g71420-like [Glycine max]
          Length = 782

 Score =  160 bits (406), Expect = 8e-38
 Identities = 73/129 (56%), Positives = 101/129 (78%)
 Frame = +3

Query: 15  FYPDCYVFTVLLKACANLVTESAAAAVHGQVVRAGFLNVLELDNALIHAYSRCGSVDNAE 194
           + PD Y F++ LKACA  VTE  A A+H QV++ GF     L NAL+HAY+RCGS+  +E
Sbjct: 405 YLPDWYTFSIALKACAYFVTEQHAMAIHSQVIKKGFQEDTVLCNALMHAYARCGSLALSE 464

Query: 195 RVFHDMSSRDVVSWNSMLKAYAVHGKAETALDLFAQMDVAPDEATFVALLTSCSHAGMVK 374
           +VF++M   D+VSWNSMLK+YA+HG+A+ AL+LF QM+V PD ATFVALL++CSH G+V 
Sbjct: 465 QVFNEMGCHDLVSWNSMLKSYAIHGQAKDALELFQQMNVCPDSATFVALLSACSHVGLVD 524

Query: 375 EGIEMFDTM 401
           EG+++F++M
Sbjct: 525 EGVKLFNSM 533


>ref|XP_002327307.1| predicted protein [Populus trichocarpa] gi|222835677|gb|EEE74112.1|
           predicted protein [Populus trichocarpa]
          Length = 527

 Score =  160 bits (404), Expect = 1e-37
 Identities = 77/133 (57%), Positives = 103/133 (77%)
 Frame = +3

Query: 3   WEDDFYPDCYVFTVLLKACANLVTESAAAAVHGQVVRAGFLNVLELDNALIHAYSRCGSV 182
           + +   PD   F+++LKACA  VTE  A AV+ QVV+AGF +   L N LIHAY+RCGS+
Sbjct: 146 YREGLAPDWCTFSIVLKACAGFVTERHALAVYSQVVKAGFEDDRVLANTLIHAYARCGSI 205

Query: 183 DNAERVFHDMSSRDVVSWNSMLKAYAVHGKAETALDLFAQMDVAPDEATFVALLTSCSHA 362
             +++VF  M SRDVVSWNSM+KAYA+HG+A+ AL LF++M+V PD AT VALL++CSHA
Sbjct: 206 SFSKQVFDKMRSRDVVSWNSMIKAYALHGQAKEALHLFSEMNVRPDSATMVALLSACSHA 265

Query: 363 GMVKEGIEMFDTM 401
           G+V+EGI +FD+M
Sbjct: 266 GLVEEGINIFDSM 278



 Score = 62.4 bits (150), Expect = 4e-08
 Identities = 26/68 (38%), Positives = 43/68 (63%), Gaps = 2/68 (2%)
 Frame = +3

Query: 162 YSRCGSVDNAERVFHDMSSRDVVSWNSMLKAYAVHGKAETALDLFAQM--DVAPDEATFV 335
           Y++CG +D A +VF +M  R+VVSW +++  YA HG++     LF+ M  D  P+E  F 
Sbjct: 2   YAKCGDLDRARQVFDEMGRRNVVSWTALISGYAQHGRSYECFSLFSDMLVDCYPNEFAFA 61

Query: 336 ALLTSCSH 359
           +++ SC +
Sbjct: 62  SVIISCDY 69



 Score = 56.6 bits (135), Expect = 2e-06
 Identities = 45/131 (34%), Positives = 65/131 (49%), Gaps = 9/131 (6%)
 Frame = +3

Query: 12  DFYPDCYVFTVLLKACANLVTESAAAAVHGQVVRAGFLNVLELDNALIHAYSRC------ 173
           D YP+ + F  ++ +C  +  +     VH   ++ G +  + + NALI  YS+       
Sbjct: 52  DCYPNEFAFASVIISCDYVCGKQ----VHALALKMGLIASVYVGNALITRYSKSCEDNFV 107

Query: 174 GSVDNAERVFHDMSSRDVVSWNSMLKAYAVHGKAETALDLFAQM---DVAPDEATFVALL 344
           G    A RVF  M  R++VSWNSM+ A       E AL LF Q+    +APD  TF  +L
Sbjct: 108 GYGSEACRVFESMEFRNLVSWNSMIAA------EEEALLLFRQLYREGLAPDWCTFSIVL 161

Query: 345 TSCSHAGMVKE 377
            +C  AG V E
Sbjct: 162 KAC--AGFVTE 170


>ref|NP_177298.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75169716|sp|Q9C9H9.1|PP114_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g71420 gi|12323734|gb|AAG51830.1|AC016163_19
           hypothetical protein; 56014-58251 [Arabidopsis thaliana]
           gi|332197078|gb|AEE35199.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 745

 Score =  159 bits (403), Expect = 2e-37
 Identities = 73/132 (55%), Positives = 101/132 (76%)
 Frame = +3

Query: 6   EDDFYPDCYVFTVLLKACANLVTESAAAAVHGQVVRAGFLNVLELDNALIHAYSRCGSVD 185
           ++   PD Y F+ +LKACA LVT   A ++H QV++ GFL    L+N+LIHAY++CGS+D
Sbjct: 362 QEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLD 421

Query: 186 NAERVFHDMSSRDVVSWNSMLKAYAVHGKAETALDLFAQMDVAPDEATFVALLTSCSHAG 365
              RVF DM SRDVVSWNSMLKAY++HG+ ++ L +F +MD+ PD ATF+ALL++CSHAG
Sbjct: 422 LCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAG 481

Query: 366 MVKEGIEMFDTM 401
            V+EG+ +F +M
Sbjct: 482 RVEEGLRIFRSM 493



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
 Frame = +3

Query: 36  FTVLLKACANLVTESAAAAVHGQVVRAGFL---NVLELDNALIHAYSRCGSVDNAERVFH 206
           +  L +ACA          +H  ++   +    NV+ L N LI+ Y++CG++  A +VF 
Sbjct: 62  YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVI-LANFLINMYAKCGNILYARQVFD 120

Query: 207 DMSSRDVVSWNSMLKAYAVHGKAETALDLFAQM--DVAPDEATFVALLTSCSH 359
            M  R+VVSW +++  Y   G  +    LF+ M     P+E T  ++LTSC +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRY 173


>dbj|BAF02198.1| hypothetical protein [Arabidopsis thaliana]
          Length = 727

 Score =  159 bits (403), Expect = 2e-37
 Identities = 73/132 (55%), Positives = 101/132 (76%)
 Frame = +3

Query: 6   EDDFYPDCYVFTVLLKACANLVTESAAAAVHGQVVRAGFLNVLELDNALIHAYSRCGSVD 185
           ++   PD Y F+ +LKACA LVT   A ++H QV++ GFL    L+N+LIHAY++CGS+D
Sbjct: 362 QEKLSPDWYTFSSVLKACAGLVTARHALSIHAQVIKGGFLADTVLNNSLIHAYAKCGSLD 421

Query: 186 NAERVFHDMSSRDVVSWNSMLKAYAVHGKAETALDLFAQMDVAPDEATFVALLTSCSHAG 365
              RVF DM SRDVVSWNSMLKAY++HG+ ++ L +F +MD+ PD ATF+ALL++CSHAG
Sbjct: 422 LCMRVFDDMDSRDVVSWNSMLKAYSLHGQVDSILPVFQKMDINPDSATFIALLSACSHAG 481

Query: 366 MVKEGIEMFDTM 401
            V+EG+ +F +M
Sbjct: 482 RVEEGLRIFRSM 493



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 35/113 (30%), Positives = 58/113 (51%), Gaps = 5/113 (4%)
 Frame = +3

Query: 36  FTVLLKACANLVTESAAAAVHGQVVRAGFL---NVLELDNALIHAYSRCGSVDNAERVFH 206
           +  L +ACA          +H  ++   +    NV+ L N LI+ Y++CG++  A +VF 
Sbjct: 62  YAALFQACAEQRNLLDGINLHHHMLSHPYCYSQNVI-LANFLINMYAKCGNILYARQVFD 120

Query: 207 DMSSRDVVSWNSMLKAYAVHGKAETALDLFAQM--DVAPDEATFVALLTSCSH 359
            M  R+VVSW +++  Y   G  +    LF+ M     P+E T  ++LTSC +
Sbjct: 121 TMPERNVVSWTALITGYVQAGNEQEGFCLFSSMLSHCFPNEFTLSSVLTSCRY 173


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