BLASTX nr result

ID: Salvia21_contig00040626 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00040626
         (279 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containi...   148   4e-34
emb|CBI16398.3| unnamed protein product [Vitis vinifera]              148   4e-34
gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Me...   141   6e-32
ref|XP_003605160.1| Pentatricopeptide repeat-containing protein ...   141   6e-32
ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana] gi...   137   9e-31

>ref|XP_002282912.2| PREDICTED: pentatricopeptide repeat-containing protein At2g22410,
           mitochondrial-like [Vitis vinifera]
          Length = 642

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/92 (77%), Positives = 79/92 (85%)
 Frame = -3

Query: 277 WTTMVVGYAKHGYLDVARRLFDEMPEEKDVVPWNAMLSAYVQAQHGKEALALFHEMQAEE 98
           WTTMVVGYA+ G LD+A +LFDEMP+ KDVVPWNAM+  YV A  GKEALALF+EMQA  
Sbjct: 277 WTTMVVGYAQSGLLDMAWKLFDEMPD-KDVVPWNAMIGGYVHANRGKEALALFNEMQAMN 335

Query: 97  VEPDEVTMVSCLSACAQLGALDVGIWIHRYIE 2
           + PDEVTMVSCLSAC+QLGALDVGIWIH YIE
Sbjct: 336 INPDEVTMVSCLSACSQLGALDVGIWIHHYIE 367



 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 38/81 (46%), Positives = 55/81 (67%)
 Frame = -3

Query: 244 GYLDVARRLFDEMPEEKDVVPWNAMLSAYVQAQHGKEALALFHEMQAEEVEPDEVTMVSC 65
           G LD AR++FD+    +D+V WN+M++ YV+     EAL  + EM+ E ++PDEVTM+  
Sbjct: 156 GDLDGARKMFDKSCV-RDLVSWNSMINGYVRRGWAYEALNFYREMKVEGIKPDEVTMIGV 214

Query: 64  LSACAQLGALDVGIWIHRYIE 2
           +S+CAQL  LD+G   H YIE
Sbjct: 215 VSSCAQLEDLDLGRESHCYIE 235


>emb|CBI16398.3| unnamed protein product [Vitis vinifera]
          Length = 608

 Score =  148 bits (374), Expect = 4e-34
 Identities = 71/92 (77%), Positives = 79/92 (85%)
 Frame = -3

Query: 277 WTTMVVGYAKHGYLDVARRLFDEMPEEKDVVPWNAMLSAYVQAQHGKEALALFHEMQAEE 98
           WTTMVVGYA+ G LD+A +LFDEMP+ KDVVPWNAM+  YV A  GKEALALF+EMQA  
Sbjct: 249 WTTMVVGYAQSGLLDMAWKLFDEMPD-KDVVPWNAMIGGYVHANRGKEALALFNEMQAMN 307

Query: 97  VEPDEVTMVSCLSACAQLGALDVGIWIHRYIE 2
           + PDEVTMVSCLSAC+QLGALDVGIWIH YIE
Sbjct: 308 INPDEVTMVSCLSACSQLGALDVGIWIHHYIE 339


>gb|ABD33115.1| SAM (and some other nucleotide) binding motif; Methyltransferase
           small; Tetratricopeptide-like helical [Medicago
           truncatula]
          Length = 971

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/92 (71%), Positives = 79/92 (85%)
 Frame = -3

Query: 277 WTTMVVGYAKHGYLDVARRLFDEMPEEKDVVPWNAMLSAYVQAQHGKEALALFHEMQAEE 98
           WTTMV+GYA+ G+LDVAR +  ++PE K VVPWNA++S  VQA+ GKEALALFHEMQ   
Sbjct: 328 WTTMVLGYARFGFLDVAREILYKIPE-KSVVPWNAIISGCVQAKQGKEALALFHEMQIRT 386

Query: 97  VEPDEVTMVSCLSACAQLGALDVGIWIHRYIE 2
           +EPD+VTMV+CLSAC+QLGALDVGIWIH YIE
Sbjct: 387 IEPDKVTMVNCLSACSQLGALDVGIWIHHYIE 418



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/81 (37%), Positives = 54/81 (66%)
 Frame = -3

Query: 244 GYLDVARRLFDEMPEEKDVVPWNAMLSAYVQAQHGKEALALFHEMQAEEVEPDEVTMVSC 65
           G L VA  +F++    +D+V WN+M++  V+     EA+ ++ EM+AE+V P+E+TM+  
Sbjct: 207 GELSVAYDVFNKS-RVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGM 265

Query: 64  LSACAQLGALDVGIWIHRYIE 2
           +S+C+Q+  L++G   H YI+
Sbjct: 266 ISSCSQVQDLNLGKEFHCYIK 286


>ref|XP_003605160.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355506215|gb|AES87357.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 1026

 Score =  141 bits (355), Expect = 6e-32
 Identities = 66/92 (71%), Positives = 79/92 (85%)
 Frame = -3

Query: 277 WTTMVVGYAKHGYLDVARRLFDEMPEEKDVVPWNAMLSAYVQAQHGKEALALFHEMQAEE 98
           WTTMV+GYA+ G+LDVAR +  ++PE K VVPWNA++S  VQA+ GKEALALFHEMQ   
Sbjct: 328 WTTMVLGYARFGFLDVAREILYKIPE-KSVVPWNAIISGCVQAKQGKEALALFHEMQIRT 386

Query: 97  VEPDEVTMVSCLSACAQLGALDVGIWIHRYIE 2
           +EPD+VTMV+CLSAC+QLGALDVGIWIH YIE
Sbjct: 387 IEPDKVTMVNCLSACSQLGALDVGIWIHHYIE 418



 Score = 61.6 bits (148), Expect = 6e-08
 Identities = 30/81 (37%), Positives = 54/81 (66%)
 Frame = -3

Query: 244 GYLDVARRLFDEMPEEKDVVPWNAMLSAYVQAQHGKEALALFHEMQAEEVEPDEVTMVSC 65
           G L VA  +F++    +D+V WN+M++  V+     EA+ ++ EM+AE+V P+E+TM+  
Sbjct: 207 GELSVAYDVFNKS-RVRDLVTWNSMITGCVKRGLAIEAIKIYKEMEAEKVRPNEITMIGM 265

Query: 64  LSACAQLGALDVGIWIHRYIE 2
           +S+C+Q+  L++G   H YI+
Sbjct: 266 ISSCSQVQDLNLGKEFHCYIK 286


>ref|NP_179827.1| protein slow growth 1 [Arabidopsis thaliana]
           gi|75206347|sp|Q9SJZ3.1|PP169_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At2g22410, mitochondrial; Flags: Precursor
           gi|4544450|gb|AAD22358.1| hypothetical protein
           [Arabidopsis thaliana] gi|18086349|gb|AAL57637.1|
           At2g22410/F14M13.19 [Arabidopsis thaliana]
           gi|309260071|gb|ADO62711.1| SLOW GROWTH1 [Arabidopsis
           thaliana] gi|330252206|gb|AEC07300.1| protein slow
           growth 1 [Arabidopsis thaliana]
          Length = 681

 Score =  137 bits (345), Expect = 9e-31
 Identities = 64/92 (69%), Positives = 77/92 (83%)
 Frame = -3

Query: 277 WTTMVVGYAKHGYLDVARRLFDEMPEEKDVVPWNAMLSAYVQAQHGKEALALFHEMQAEE 98
           WTTM+ GYA+ G LDV+R+LFD+M EEKDVV WNAM+   VQA+ G++ALALF EMQ   
Sbjct: 326 WTTMISGYARCGLLDVSRKLFDDM-EEKDVVLWNAMIGGSVQAKRGQDALALFQEMQTSN 384

Query: 97  VEPDEVTMVSCLSACAQLGALDVGIWIHRYIE 2
            +PDE+TM+ CLSAC+QLGALDVGIWIHRYIE
Sbjct: 385 TKPDEITMIHCLSACSQLGALDVGIWIHRYIE 416



 Score = 65.5 bits (158), Expect = 4e-09
 Identities = 29/85 (34%), Positives = 57/85 (67%)
 Frame = -3

Query: 256 YAKHGYLDVARRLFDEMPEEKDVVPWNAMLSAYVQAQHGKEALALFHEMQAEEVEPDEVT 77
           +A  G ++ AR++FDE P  +D+V WN +++ Y +    ++A+ ++  M++E V+PD+VT
Sbjct: 201 FASCGDMENARKVFDESPV-RDLVSWNCLINGYKKIGEAEKAIYVYKLMESEGVKPDDVT 259

Query: 76  MVSCLSACAQLGALDVGIWIHRYIE 2
           M+  +S+C+ LG L+ G   + Y++
Sbjct: 260 MIGLVSSCSMLGDLNRGKEFYEYVK 284


Top