BLASTX nr result

ID: Salvia21_contig00040528 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00040528
         (993 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98562.1| retrotransposon protein, putative, Ty3-gypsy subc...    68   6e-24
gb|ABA98150.1| retrotransposon protein, putative, Ty3-gypsy subc...    55   9e-24
gb|ABA94837.1| retrotransposon protein, putative, Ty3-gypsy subc...    62   1e-22
gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]                  56   2e-22
gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subc...    55   3e-21

>gb|ABA98562.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1824

 Score = 68.2 bits (165), Expect(3) = 6e-24
 Identities = 68/250 (27%), Positives = 109/250 (43%), Gaps = 50/250 (20%)
 Frame = -1

Query: 699  RFKKCEFSLNRVVFLARVVFAQGIEVDPAKAEAINNWRTLTNASE----*NVS*DSQVIV 532
            +F KCEF L+RV FL  V+ + G+EVDP+K EA+  W    N SE      ++   +  +
Sbjct: 1113 KFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEAVLAWNPPKNVSEIRSFLGLAGYYRRFI 1172

Query: 531  EDSSRHD*QGDQSRSND*QVR------AGFQELKRRLTTVPVLTIP-------------- 412
            E  S+      +    + + +        FQE+K+RLTT PVLT+P              
Sbjct: 1173 EGFSKLARPMTELLKKEKKFQWSAACEDSFQEMKKRLTTAPVLTLPDIRKHFEIFCDASR 1232

Query: 411  ----AGLDNSVSTLTH*SKELDRRQ-----------------KRWLELVL-----DYDYT 310
                  L      + + S++L   +                 K W   ++     DYD  
Sbjct: 1233 QGLGCVLMQERKVVAYASRQLRPHEVNYPTHDLELAAVVHALKIWRHYLIGNRCEDYDLG 1292

Query: 309  IQRYQEKANVVAWHLAGKDKRQLAWMITQQETLIREFKR*KLDVVTSNTQKVKLATLVFT 130
            I  +  KANVVA  L+ K    +A +   Q+ L RE ++ +L VV S        T+  T
Sbjct: 1293 IHYHPSKANVVADALSRKVYCNVAQIWPDQDRLCRELEKLRLTVVQSGVP--ASLTVQPT 1350

Query: 129  IQD*LKKAQE 100
            ++  +++AQ+
Sbjct: 1351 LESQIREAQK 1360



 Score = 55.1 bits (131), Expect(3) = 6e-24
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -3

Query: 973  LDRLTIKRKYHLPRVEDLLNQLKEVDVISKIDLRLGCHQIRIK*SD 836
            L+ +TIK KY LPR++DL +QLK   V SKIDLR G HQ++I+  D
Sbjct: 987  LNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSED 1032



 Score = 34.7 bits (78), Expect(3) = 6e-24
 Identities = 15/49 (30%), Positives = 30/49 (61%)
 Frame = -2

Query: 824  DFPDKLVIVFINNILIYLSNDV*RDEYFKIVLLTLWNAKLYADLRSASF 678
            ++ D+ V+VFI++ILIY  N+    E+ ++++  L + +L+A      F
Sbjct: 1071 EYLDQFVVVFIDDILIYSKNEEEHAEHMRLIMEKLRDHRLFAKFSKCEF 1119


>gb|ABA98150.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1480

 Score = 55.1 bits (131), Expect(4) = 9e-24
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -3

Query: 973 LDRLTIKRKYHLPRVEDLLNQLKEVDVISKIDLRLGCHQIRIK*SD 836
           L+ +TIK KY LPR++DL +QLK   V SKIDLR G HQ++I+  D
Sbjct: 705 LNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRSED 750



 Score = 52.8 bits (125), Expect(4) = 9e-24
 Identities = 23/45 (51%), Positives = 30/45 (66%)
 Frame = -1

Query: 699 RFKKCEFSLNRVVFLARVVFAQGIEVDPAKAEAINNWRTLTNASE 565
           +F KCEF L+RV FL  V+ + G+EVDP+K EA+  W    N SE
Sbjct: 831 KFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEAVLAWNPPKNVSE 875



 Score = 36.2 bits (82), Expect(4) = 9e-24
 Identities = 16/49 (32%), Positives = 30/49 (61%)
 Frame = -2

Query: 824 DFPDKLVIVFINNILIYLSNDV*RDEYFKIVLLTLWNAKLYADLRSASF 678
           ++ D+ V+VFI++ILIY  N+    E+ ++++  L N +L+A      F
Sbjct: 789 EYLDQFVVVFIDDILIYSRNEEEHAEHLRLIMEKLRNPQLFAKFSKCEF 837



 Score = 32.7 bits (73), Expect(4) = 9e-24
 Identities = 27/94 (28%), Positives = 43/94 (45%), Gaps = 4/94 (4%)
 Frame = -3

Query: 565  VKCFLGLAGYCRRFIKARLTR*SVTFK*LTSAGRISRIEEKIDDSTSVDHTSWIRQLRIY 386
            ++ FLGLAGY RRFI+      S   + +T   +  +  E +  +  +      +   I+
Sbjct: 876  IRSFLGLAGYYRRFIEGF----SKLARPMTELLKKEKKFEWLTTAPVLTLPDIRKDFEIF 931

Query: 385  TDTLKQGAG----QETEKMARACVRLRLHHTTLP 296
             D  +QG G    QE + +A A  +LR H    P
Sbjct: 932  CDASRQGLGCVLMQERKVVAYASRQLRPHEVNYP 965


>gb|ABA94837.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
            Japonica Group]
          Length = 1269

 Score = 62.0 bits (149), Expect(3) = 1e-22
 Identities = 39/106 (36%), Positives = 57/106 (53%), Gaps = 10/106 (9%)
 Frame = -1

Query: 699  RFKKCEFSLNRVVFLARVVFAQGIEVDPAKAEAINNWRTLTNASE----*NVS*DSQVIV 532
            +F KCEF L+RV FL  V+ + G+EVDP+K EA+  W    N SE      ++   Q  +
Sbjct: 995  KFSKCEFWLDRVAFLGHVISSNGVEVDPSKVEAVLAWNPPKNVSEIRSFLGLAGYYQRFI 1054

Query: 531  EDSSRHD*QGDQSRSND*QVR------AGFQELKRRLTTVPVLTIP 412
            E  S+      +    + + +        FQE+K+RLTT PVLT+P
Sbjct: 1055 EGFSKLARPMTELLKKEKKFQWSAACEDSFQEMKKRLTTAPVLTLP 1100



 Score = 55.1 bits (131), Expect(3) = 1e-22
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -3

Query: 973  LDRLTIKRKYHLPRVEDLLNQLKEVDVISKIDLRLGCHQIRIK*SD 836
            L+ +TIK KY LPR++DL +QLK   V SKIDLR G HQ++I+  D
Sbjct: 869  LNEVTIKNKYPLPRIDDLFDQLKGARVFSKIDLRSGYHQLKIRLED 914



 Score = 36.2 bits (82), Expect(3) = 1e-22
 Identities = 16/49 (32%), Positives = 30/49 (61%)
 Frame = -2

Query: 824  DFPDKLVIVFINNILIYLSNDV*RDEYFKIVLLTLWNAKLYADLRSASF 678
            ++ D+ V+VFI++ILIY  N+    E+ ++++  L N +L+A      F
Sbjct: 953  EYLDQFVVVFIDDILIYSKNEEEHAEHLRLIMEKLRNHQLFAKFSKCEF 1001


>gb|AAO45752.1| pol protein [Cucumis melo subsp. melo]
          Length = 923

 Score = 55.8 bits (133), Expect(3) = 2e-22
 Identities = 41/113 (36%), Positives = 53/113 (46%), Gaps = 10/113 (8%)
 Frame = -1

Query: 699 RFKKCEFSLNRVVFLARVVFAQGIEVDPAKAEAINNWRTLTNASE----*NVS*DSQVIV 532
           +F KCEF L +V FL  VV   G+ VDPAK EA+  W   +  SE      ++   +  V
Sbjct: 178 KFSKCEFWLKQVSFLGHVVSKAGVSVDPAKIEAVTGWTRPSTVSEVRSFLGLAGYYRRFV 237

Query: 531 EDSSRHD*QGDQSRSN------D*QVRAGFQELKRRLTTVPVLTIPAGLDNSV 391
           E+ SR      Q                 FQ LK++L T PVLT+P G  N V
Sbjct: 238 ENFSRIATPLTQLTRKGAPFVWSKACEDSFQTLKQKLVTAPVLTVPDGSGNFV 290



 Score = 55.5 bits (132), Expect(3) = 2e-22
 Identities = 25/46 (54%), Positives = 35/46 (76%)
 Frame = -3

Query: 973 LDRLTIKRKYHLPRVEDLLNQLKEVDVISKIDLRLGCHQIRIK*SD 836
           L+++T+K +Y LPR++DL +QL+   V SKIDLR G HQ+RIK  D
Sbjct: 52  LNKVTVKNRYPLPRIDDLFDQLQGATVFSKIDLRSGYHQLRIKDED 97



 Score = 41.6 bits (96), Expect(3) = 2e-22
 Identities = 21/49 (42%), Positives = 30/49 (61%)
 Frame = -2

Query: 824 DFPDKLVIVFINNILIYLSNDV*RDEYFKIVLLTLWNAKLYADLRSASF 678
           +F D  VIVFI++ILIY   +   +E+ ++VL TL + KLYA      F
Sbjct: 136 EFLDTFVIVFIDDILIYSKTEAEHEEHLRMVLQTLRDNKLYAKFSKCEF 184


>gb|ABA98459.1| retrotransposon protein, putative, Ty3-gypsy subclass [Oryza sativa
           Japonica Group]
          Length = 1470

 Score = 55.5 bits (132), Expect(3) = 3e-21
 Identities = 26/46 (56%), Positives = 34/46 (73%)
 Frame = -3

Query: 973 LDRLTIKRKYHLPRVEDLLNQLKEVDVISKIDLRLGCHQIRIK*SD 836
           L+ +TIK KY LPR++DL +QLK   V SKIDLR G HQ++I+  D
Sbjct: 601 LNEVTIKNKYPLPRIDDLFDQLKGAKVFSKIDLRSGYHQLKIRTED 646



 Score = 53.5 bits (127), Expect(3) = 3e-21
 Identities = 33/106 (31%), Positives = 53/106 (50%), Gaps = 10/106 (9%)
 Frame = -1

Query: 699  RFKKCEFSLNRVVFLARVVFAQGIEVDPAKAEAINNWRTLTNASE----*NVS*DSQVIV 532
            +F KCEF L  V FL  V+ A G+ VDPAK EA+  W+   + +E      ++   +  +
Sbjct: 727  KFSKCEFWLKEVAFLGHVISAGGVAVDPAKVEAVTEWKAPKSVTEIRSFLGLAGYYRRFI 786

Query: 531  EDSSRHD*QGDQSRSND------*QVRAGFQELKRRLTTVPVLTIP 412
            E  S+      Q    +       Q +  F++LK +LT+ P+L +P
Sbjct: 787  EGFSKIARPMTQLLKKEKKFAWSEQCQGSFEQLKEKLTSAPILVLP 832



 Score = 39.7 bits (91), Expect(3) = 3e-21
 Identities = 20/49 (40%), Positives = 29/49 (59%)
 Frame = -2

Query: 824 DFPDKLVIVFINNILIYLSNDV*RDEYFKIVLLTLWNAKLYADLRSASF 678
           D+ DK V+VFI++ILIY  ++    E+ ++VL  L   KLYA      F
Sbjct: 685 DYLDKFVVVFIDDILIYSKDEEEHAEHLRLVLQKLRKHKLYAKFSKCEF 733


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