BLASTX nr result

ID: Salvia21_contig00040502 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00040502
         (292 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago ...    83   2e-14
ref|XP_002306009.1| predicted protein [Populus trichocarpa] gi|2...    74   2e-11
ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat...    70   1e-10
ref|NP_196466.1| pentatricopeptide repeat-containing protein [Ar...    69   4e-10
emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]    67   1e-09

>ref|XP_003602712.1| hypothetical protein MTR_3g098230 [Medicago truncatula]
           gi|355491760|gb|AES72963.1| hypothetical protein
           MTR_3g098230 [Medicago truncatula]
          Length = 867

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 40/76 (52%), Positives = 54/76 (71%), Gaps = 4/76 (5%)
 Frame = +2

Query: 77  EALSV----LLQRRSYESSYQVLADLLKSCAAASGIKLGKSVHAHVIKEGHDCCHLISKA 244
           EALS     L    +++  ++VLA +LKSC+A     LGK +H++V+K+GH  CH+ SKA
Sbjct: 18  EALSFFHHCLKDSAAFKPDHEVLAAILKSCSALLASNLGKCLHSYVVKQGHVSCHVTSKA 77

Query: 245 LLNMYAKCRVLDDCHK 292
           LLNMYAKC +LDDCHK
Sbjct: 78  LLNMYAKCGMLDDCHK 93


>ref|XP_002306009.1| predicted protein [Populus trichocarpa] gi|222848973|gb|EEE86520.1|
           predicted protein [Populus trichocarpa]
          Length = 870

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 31/61 (50%), Positives = 42/61 (68%)
 Frame = +2

Query: 110 YESSYQVLADLLKSCAAASGIKLGKSVHAHVIKEGHDCCHLISKALLNMYAKCRVLDDCH 289
           +   YQ +A +LKSCA  S IK G+++H  +++ GH  CH +SKALLNMYAKC  LD+  
Sbjct: 20  FRQDYQAVASILKSCAGLSAIKWGRALHGSIVRIGHVSCHAVSKALLNMYAKCGALDESK 79

Query: 290 K 292
           K
Sbjct: 80  K 80


>ref|XP_003528082.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g08490-like [Glycine max]
          Length = 875

 Score = 70.5 bits (171), Expect = 1e-10
 Identities = 34/76 (44%), Positives = 51/76 (67%), Gaps = 4/76 (5%)
 Frame = +2

Query: 77  EALSV----LLQRRSYESSYQVLADLLKSCAAASGIKLGKSVHAHVIKEGHDCCHLISKA 244
           EALS+    L    +++  + VLA +LKSC+A     LG+++H +V+K+GH  CH+ +K 
Sbjct: 24  EALSLFHHCLKGHEAFKPDHTVLAAILKSCSALLAPNLGRTLHGYVVKQGHGSCHVTNKG 83

Query: 245 LLNMYAKCRVLDDCHK 292
           LLNMYAKC +L +C K
Sbjct: 84  LLNMYAKCGMLVECLK 99


>ref|NP_196466.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171897|sp|Q9FNN9.1|PP370_ARATH RecName:
           Full=Putative pentatricopeptide repeat-containing
           protein At5g08490 gi|9759343|dbj|BAB09998.1|
           selenium-binding protein-like [Arabidopsis thaliana]
           gi|332003927|gb|AED91310.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 849

 Score = 68.9 bits (167), Expect = 4e-10
 Identities = 30/77 (38%), Positives = 49/77 (63%)
 Frame = +2

Query: 62  MGTMREALSVLLQRRSYESSYQVLADLLKSCAAASGIKLGKSVHAHVIKEGHDCCHLISK 241
           MG +R+ +        + + ++V  D++K+CA+ S +  G+++H  V K GH  C  +SK
Sbjct: 1   MGPLRQFVQNFRLLSGFGTDHRVFLDVVKACASVSDLTSGRALHGCVFKLGHIACSEVSK 60

Query: 242 ALLNMYAKCRVLDDCHK 292
           ++LNMYAKCR +DDC K
Sbjct: 61  SVLNMYAKCRRMDDCQK 77


>emb|CAN78103.1| hypothetical protein VITISV_043511 [Vitis vinifera]
          Length = 1849

 Score = 67.4 bits (163), Expect = 1e-09
 Identities = 37/85 (43%), Positives = 50/85 (58%), Gaps = 4/85 (4%)
 Frame = +2

Query: 50   VSTAMGTMREALSVLLQRR----SYESSYQVLADLLKSCAAASGIKLGKSVHAHVIKEGH 217
            +S  M    EALS+ L+R      Y+ + Q+LA LLKSC A S I+ G  +H + +K GH
Sbjct: 943  LSKLMEKHDEALSLFLERVRCSVGYKPNGQILAALLKSCVAXSAIRFGSVLHGYALKLGH 1002

Query: 218  DCCHLISKALLNMYAKCRVLDDCHK 292
              C  + K LLN+YAK   LD C+K
Sbjct: 1003 VSCQSLCKGLLNLYAKSGALDYCNK 1027


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