BLASTX nr result

ID: Salvia21_contig00039852 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00039852
         (310 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|2...   144   1e-32
ref|NP_190337.1| pentatricopeptide repeat-containing protein [Ar...   144   1e-32
emb|CBI15219.3| unnamed protein product [Vitis vinifera]              141   6e-32
ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containi...   141   6e-32
ref|XP_002877566.1| pentatricopeptide repeat-containing protein ...   140   8e-32

>ref|XP_002304264.1| predicted protein [Populus trichocarpa] gi|222841696|gb|EEE79243.1|
           predicted protein [Populus trichocarpa]
          Length = 499

 Score =  144 bits (362), Expect = 1e-32
 Identities = 67/105 (63%), Positives = 86/105 (81%), Gaps = 3/105 (2%)
 Frame = -1

Query: 310 HVFFADDFSHPREKEIYEMLAEINQQLRIGGYVAEIASEM---GSRSEPYVLSYHSEKLA 140
           H F  DD SHP++ EIYEML EI++QL+I GYVAEI SE+    +  + YVLSYHSEKLA
Sbjct: 377 HEFVVDDVSHPQKDEIYEMLDEISKQLKIAGYVAEITSELPNLDAEEKRYVLSYHSEKLA 436

Query: 139 IAFGILSTPPGTALRVAKDLRICVDCHSFCKLVSAVYNRRVVVRD 5
           IAFG+L+TPPGT +R+AK+LRICVDCH+F K++S VYNR+V++ D
Sbjct: 437 IAFGVLATPPGTTIRIAKNLRICVDCHNFAKILSGVYNRQVIITD 481


>ref|NP_190337.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75206890|sp|Q9SN85.1|PP267_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g47530 gi|6522536|emb|CAB61979.1| putative protein
           [Arabidopsis thaliana] gi|62320272|dbj|BAD94558.1|
           hypothetical protein [Arabidopsis thaliana]
           gi|332644772|gb|AEE78293.1| pentatricopeptide
           repeat-containing protein [Arabidopsis thaliana]
          Length = 591

 Score =  144 bits (362), Expect = 1e-32
 Identities = 71/107 (66%), Positives = 82/107 (76%), Gaps = 4/107 (3%)
 Frame = -1

Query: 310 HVFFADDFSHPREKEIYEMLAEINQQLRIGGYVAEIASEM----GSRSEPYVLSYHSEKL 143
           H F  DD SHPR++EIY+MLAEINQQL+I GYVAEI SE+        + Y L YHSEKL
Sbjct: 468 HEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLESEEEKGYALRYHSEKL 527

Query: 142 AIAFGILSTPPGTALRVAKDLRICVDCHSFCKLVSAVYNRRVVVRDR 2
           AIAFGIL TPPGT +RV K+LR CVDCH+F K VS VY+R V+VRDR
Sbjct: 528 AIAFGILVTPPGTTIRVTKNLRTCVDCHNFAKFVSDVYDRIVIVRDR 574


>emb|CBI15219.3| unnamed protein product [Vitis vinifera]
          Length = 497

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/106 (64%), Positives = 83/106 (78%), Gaps = 3/106 (2%)
 Frame = -1

Query: 310 HVFFADDFSHPREKEIYEMLAEINQQLRIGGYVAEIASEM---GSRSEPYVLSYHSEKLA 140
           H F  DD  HPR  EIYEML EI +QL+I GYVAE++SE+   G+  +   LSYHSEKLA
Sbjct: 375 HEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSSELHNLGAEEKGNRLSYHSEKLA 434

Query: 139 IAFGILSTPPGTALRVAKDLRICVDCHSFCKLVSAVYNRRVVVRDR 2
           IAFG+L+TPPGT +RVAK+LRICVDCH+F K++S  YNR VV+RDR
Sbjct: 435 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAYNREVVIRDR 480


>ref|XP_002282049.1| PREDICTED: pentatricopeptide repeat-containing protein At3g47530
           [Vitis vinifera]
          Length = 643

 Score =  141 bits (355), Expect = 6e-32
 Identities = 68/106 (64%), Positives = 83/106 (78%), Gaps = 3/106 (2%)
 Frame = -1

Query: 310 HVFFADDFSHPREKEIYEMLAEINQQLRIGGYVAEIASEM---GSRSEPYVLSYHSEKLA 140
           H F  DD  HPR  EIYEML EI +QL+I GYVAE++SE+   G+  +   LSYHSEKLA
Sbjct: 521 HEFVVDDILHPRTDEIYEMLDEIGKQLKIAGYVAELSSELHNLGAEEKGNRLSYHSEKLA 580

Query: 139 IAFGILSTPPGTALRVAKDLRICVDCHSFCKLVSAVYNRRVVVRDR 2
           IAFG+L+TPPGT +RVAK+LRICVDCH+F K++S  YNR VV+RDR
Sbjct: 581 IAFGVLATPPGTTIRVAKNLRICVDCHNFAKVLSGAYNREVVIRDR 626


>ref|XP_002877566.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323404|gb|EFH53825.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 591

 Score =  140 bits (354), Expect = 8e-32
 Identities = 70/107 (65%), Positives = 81/107 (75%), Gaps = 4/107 (3%)
 Frame = -1

Query: 310 HVFFADDFSHPREKEIYEMLAEINQQLRIGGYVAEIASEM----GSRSEPYVLSYHSEKL 143
           H F  DD SHPR++EIY+MLAEINQQL+I GYVAEI SE+        + Y L YHSEKL
Sbjct: 468 HEFIVDDVSHPRKEEIYKMLAEINQQLKIAGYVAEITSELHNLDSEEEKGYALRYHSEKL 527

Query: 142 AIAFGILSTPPGTALRVAKDLRICVDCHSFCKLVSAVYNRRVVVRDR 2
           AIAFGIL TPP T +RV K+LR CVDCH+F K VS VY+R V+VRDR
Sbjct: 528 AIAFGILVTPPETTIRVTKNLRTCVDCHNFAKFVSDVYDRVVIVRDR 574


Top