BLASTX nr result

ID: Salvia21_contig00039848 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00039848
         (242 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containi...   134   1e-29
ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containi...   129   2e-28
ref|XP_002514406.1| pentatricopeptide repeat-containing protein,...   129   2e-28
emb|CBI37724.3| unnamed protein product [Vitis vinifera]              124   8e-27
ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containi...   124   8e-27

>ref|XP_003524101.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Glycine max]
          Length = 854

 Score =  134 bits (336), Expect = 1e-29
 Identities = 58/80 (72%), Positives = 71/80 (88%)
 Frame = +1

Query: 1   SMHKHKLWADSVTYAELIKCCIARGAVKQGKQVHHHVFSNGYEPKTFLINTLVNMYVKFN 180
           SM +  +WADS+TY+ELIKCC+A GAV++GK+VH H+FSNGY PKTFL N L+NMYVKFN
Sbjct: 275 SMERRGVWADSITYSELIKCCLAHGAVREGKRVHRHIFSNGYHPKTFLTNILINMYVKFN 334

Query: 181 LLDEAQLLFDRMLERNVVSW 240
           LL+EAQ+LFD+M ERNVVSW
Sbjct: 335 LLEEAQVLFDKMPERNVVSW 354


>ref|XP_004139977.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
           gi|449475689|ref|XP_004154524.1| PREDICTED:
           pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial-like [Cucumis sativus]
          Length = 586

 Score =  129 bits (325), Expect = 2e-28
 Identities = 58/80 (72%), Positives = 71/80 (88%)
 Frame = +1

Query: 1   SMHKHKLWADSVTYAELIKCCIARGAVKQGKQVHHHVFSNGYEPKTFLINTLVNMYVKFN 180
           +MH+++L AD++TY+ELIKCC+ RGAV+Q + VH HVFSNGYEPKTFLINTL+NMYVKF 
Sbjct: 6   AMHRNRLSADAITYSELIKCCLVRGAVQQARLVHEHVFSNGYEPKTFLINTLINMYVKFG 65

Query: 181 LLDEAQLLFDRMLERNVVSW 240
           LLDEA+ LFD M +RNVVSW
Sbjct: 66  LLDEARNLFDEMPDRNVVSW 85


>ref|XP_002514406.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223546503|gb|EEF48002.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 436

 Score =  129 bits (324), Expect = 2e-28
 Identities = 58/80 (72%), Positives = 69/80 (86%)
 Frame = +1

Query: 1   SMHKHKLWADSVTYAELIKCCIARGAVKQGKQVHHHVFSNGYEPKTFLINTLVNMYVKFN 180
           +MHKH +WADS TY+ELIKCC+AR A++QGKQV+ H+ SNGY+P  FLIN L+NMYVKFN
Sbjct: 47  AMHKHGIWADSFTYSELIKCCLARNAIEQGKQVYKHLSSNGYQPNIFLINMLLNMYVKFN 106

Query: 181 LLDEAQLLFDRMLERNVVSW 240
           LLDEA  LFD+M ERNVVSW
Sbjct: 107 LLDEALTLFDQMPERNVVSW 126


>emb|CBI37724.3| unnamed protein product [Vitis vinifera]
          Length = 339

 Score =  124 bits (311), Expect = 8e-27
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = +1

Query: 1   SMHKHKLWADSVTYAELIKCCIARGAVKQGKQVHHHVFSNGYEPKTFLINTLVNMYVKFN 180
           +M +H ++AD++TY+ELIKCC ARGAV++GK+VH H+F  GYEPK F++NTL+NMYVKFN
Sbjct: 36  AMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFN 95

Query: 181 LLDEAQLLFDRMLERNVVSW 240
           LL+EA+ LFD M ERNVVSW
Sbjct: 96  LLEEAEDLFDEMPERNVVSW 115


>ref|XP_002279974.1| PREDICTED: pentatricopeptide repeat-containing protein At2g03880,
           mitochondrial [Vitis vinifera]
          Length = 623

 Score =  124 bits (311), Expect = 8e-27
 Identities = 54/80 (67%), Positives = 70/80 (87%)
 Frame = +1

Query: 1   SMHKHKLWADSVTYAELIKCCIARGAVKQGKQVHHHVFSNGYEPKTFLINTLVNMYVKFN 180
           +M +H ++AD++TY+ELIKCC ARGAV++GK+VH H+F  GYEPK F++NTL+NMYVKFN
Sbjct: 45  AMERHGVFADAITYSELIKCCSARGAVQEGKRVHEHIFCKGYEPKMFVVNTLLNMYVKFN 104

Query: 181 LLDEAQLLFDRMLERNVVSW 240
           LL+EA+ LFD M ERNVVSW
Sbjct: 105 LLEEAEDLFDEMPERNVVSW 124



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 25/72 (34%), Positives = 41/72 (56%)
 Frame = +1

Query: 25  ADSVTYAELIKCCIARGAVKQGKQVHHHVFSNGYEPKTFLINTLVNMYVKFNLLDEAQLL 204
           AD  T   +++ C     ++ G+QVH HV    ++    L N L++MY K   L++A   
Sbjct: 251 ADQATLTSVLRACTGLALLELGRQVHVHVLK--FDQDLILNNALIDMYCKCGSLEDANSA 308

Query: 205 FDRMLERNVVSW 240
           F RM+E++V+SW
Sbjct: 309 FSRMVEKDVISW 320


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