BLASTX nr result

ID: Salvia21_contig00039637 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00039637
         (472 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containi...   136   2e-30
ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|2...   134   1e-29
ref|XP_003617444.1| Pentatricopeptide repeat-containing protein ...   119   3e-25
ref|XP_002534070.1| pentatricopeptide repeat-containing protein,...   117   1e-24
dbj|BAK05712.1| predicted protein [Hordeum vulgare subsp. vulgare]    115   3e-24

>ref|XP_002279693.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic [Vitis vinifera]
           gi|302143555|emb|CBI22116.3| unnamed protein product
           [Vitis vinifera]
          Length = 533

 Score =  136 bits (343), Expect = 2e-30
 Identities = 68/119 (57%), Positives = 84/119 (70%)
 Frame = +1

Query: 1   HYGCMVDALGRAGRIEEAAELVSSMPVKPDAAVWGSLLAACSKHGGSVEVAEWAAGNLRL 180
           HY CMVD LGRAG +EEA EL+ +MPV PDA +W SLL+AC KHG +VE+A+ AA ++  
Sbjct: 396 HYSCMVDTLGRAGLLEEAEELIRNMPVNPDAIIWSSLLSACRKHG-NVELAKRAAKHIVD 454

Query: 181 LDGNDTSARVLMSNVYAAGGDFGKAVXXXXXXXXXXXXXXPGCSLIEVNGEVHEFVAGG 357
           LDGND+   VL+SN+YAA   F +A+              PGCSLIEVNGE+HEFVAGG
Sbjct: 455 LDGNDSCGYVLLSNIYAASDQFEEAMEQRLSMKEKQIEKEPGCSLIEVNGEIHEFVAGG 513


>ref|XP_002306741.1| predicted protein [Populus trichocarpa] gi|222856190|gb|EEE93737.1|
           predicted protein [Populus trichocarpa]
          Length = 509

 Score =  134 bits (336), Expect = 1e-29
 Identities = 66/119 (55%), Positives = 85/119 (71%)
 Frame = +1

Query: 1   HYGCMVDALGRAGRIEEAAELVSSMPVKPDAAVWGSLLAACSKHGGSVEVAEWAAGNLRL 180
           HY CMVD LGRAG +EEA EL+ SMPV PDA +WGSLL++C ++G ++E+A+ AA  +  
Sbjct: 368 HYSCMVDVLGRAGLLEEAEELIKSMPVNPDAIIWGSLLSSCREYG-NIEMAKQAAKRVNE 426

Query: 181 LDGNDTSARVLMSNVYAAGGDFGKAVXXXXXXXXXXXXXXPGCSLIEVNGEVHEFVAGG 357
           LD N++S+ +L+SNVYAA   F +A+              PGCSLIEVNGEVHEFVAGG
Sbjct: 427 LDPNESSSFILLSNVYAAHNHFEEAIEQRLSLKEKQMDKEPGCSLIEVNGEVHEFVAGG 485


>ref|XP_003617444.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355518779|gb|AET00403.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 542

 Score =  119 bits (298), Expect = 3e-25
 Identities = 60/119 (50%), Positives = 79/119 (66%)
 Frame = +1

Query: 1   HYGCMVDALGRAGRIEEAAELVSSMPVKPDAAVWGSLLAACSKHGGSVEVAEWAAGNLRL 180
           HY C+VD LG+AG +EEA EL+  MP+KPDA +WGSLL++C KH  +V++A  AA  +  
Sbjct: 403 HYTCIVDVLGQAGLLEEAEELIKGMPLKPDAIIWGSLLSSCRKH-RNVQIARRAAQRVYE 461

Query: 181 LDGNDTSARVLMSNVYAAGGDFGKAVXXXXXXXXXXXXXXPGCSLIEVNGEVHEFVAGG 357
           L+ +D S  VLMSNV+AA   F +A+              PGCS IE+ GEVHEF+AGG
Sbjct: 462 LNPSDASGYVLMSNVHAASNKFEEAIEQRLLMKENLTEKEPGCSSIELYGEVHEFIAGG 520


>ref|XP_002534070.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525897|gb|EEF28314.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 533

 Score =  117 bits (293), Expect = 1e-24
 Identities = 60/119 (50%), Positives = 82/119 (68%)
 Frame = +1

Query: 1   HYGCMVDALGRAGRIEEAAELVSSMPVKPDAAVWGSLLAACSKHGGSVEVAEWAAGNLRL 180
           H+ CMVD LGRAG +EEA EL+ SM V PDA +WGSLL +C K+ G++++A+ AA +L  
Sbjct: 393 HFSCMVDVLGRAGLLEEAEELIRSMHVDPDAIIWGSLLWSCCKY-GNIKMAKRAANHLIE 451

Query: 181 LDGNDTSARVLMSNVYAAGGDFGKAVXXXXXXXXXXXXXXPGCSLIEVNGEVHEFVAGG 357
           L+ +++S+ VL++N YAA  +F +A+              PGCS IEV GEVHEFVAGG
Sbjct: 452 LNPSESSSFVLVANAYAAANNFEEALKERLTLKENHIGKEPGCSCIEVGGEVHEFVAGG 510


>dbj|BAK05712.1| predicted protein [Hordeum vulgare subsp. vulgare]
          Length = 538

 Score =  115 bits (289), Expect = 3e-24
 Identities = 63/117 (53%), Positives = 75/117 (64%)
 Frame = +1

Query: 1   HYGCMVDALGRAGRIEEAAELVSSMPVKPDAAVWGSLLAACSKHGGSVEVAEWAAGNLRL 180
           HYGC+VD LGRAGR++EA ELVS MP++PDA +WGSLLAAC  H G V+ AE     +  
Sbjct: 411 HYGCVVDMLGRAGRLDEAEELVSVMPIRPDAIIWGSLLAACRAH-GHVDRAERVMRRM-A 468

Query: 181 LDGNDTSARVLMSNVYAAGGDFGKAVXXXXXXXXXXXXXXPGCSLIEVNGEVHEFVA 351
            D +D    VLMSN+YA  G  GKAV              PGCSLIE++G VHEF A
Sbjct: 469 EDEDDAGDYVLMSNMYAQEGRHGKAVQVRRQMRRGKVDKVPGCSLIEIDGVVHEFQA 525


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