BLASTX nr result

ID: Salvia21_contig00039569 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00039569
         (380 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003626292.1| Pentatricopeptide repeat-containing protein ...   108   3e-22
ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containi...    91   7e-17
ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat...    82   6e-14
ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containi...    81   1e-13
gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japo...    77   1e-12

>ref|XP_003626292.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355501307|gb|AES82510.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 650

 Score =  108 bits (271), Expect = 3e-22
 Identities = 52/101 (51%), Positives = 71/101 (70%)
 Frame = -1

Query: 305 TLSSITDSNLRELINSCGSQGNIRLGSHLHAYLIKSPPSFDNGAPLSRRNSQVIYNSLLH 126
           T S +  ++L  L+  CG   N+ LGS +HA +IK PPSFD     S+RN+  I+NSLL 
Sbjct: 28  TKSLLNHADLTSLLTLCGRDRNLTLGSSIHARIIKQPPSFDFDG--SQRNALFIWNSLLS 85

Query: 125 MYCKCGQLREAANLFDELPLRDTVSWNSLISGFLKLGELET 3
           MY KCG+ R A N+FD +P+RDTVSWN++ISGFL+ G+ +T
Sbjct: 86  MYSKCGEFRNAGNVFDYMPVRDTVSWNTMISGFLRNGDFDT 126


>ref|XP_002280725.1| PREDICTED: pentatricopeptide repeat-containing protein At3g05340
           [Vitis vinifera]
          Length = 656

 Score = 91.3 bits (225), Expect = 7e-17
 Identities = 43/97 (44%), Positives = 65/97 (67%)
 Frame = -1

Query: 296 SITDSNLRELINSCGSQGNIRLGSHLHAYLIKSPPSFDNGAPLSRRNSQVIYNSLLHMYC 117
           +I   ++  L++ CG +G + LGS LHA +IK+    D     + RN  V++NSLL MY 
Sbjct: 41  AINQVDISFLLSLCGREGYLHLGSSLHASIIKNFGFLDGNNRDNLRNVIVVWNSLLSMYS 100

Query: 116 KCGQLREAANLFDELPLRDTVSWNSLISGFLKLGELE 6
           +CG+LR+A  +FD +P++DT+SWNS ISG L  G++E
Sbjct: 101 RCGELRDATKVFDHMPMKDTISWNSRISGLLGNGDIE 137


>ref|XP_004156421.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At1g68930-like [Cucumis sativus]
          Length = 833

 Score = 81.6 bits (200), Expect = 6e-14
 Identities = 43/105 (40%), Positives = 65/105 (61%)
 Frame = -1

Query: 326 SPLPSIYTLSSITDSNLRELINSCGSQGNIRLGSHLHAYLIKSPPSFDNGAPLSRRNSQV 147
           +P P   +   +   +   L++ CG +GN+ LGS LHA +IKS   F+     +  N  V
Sbjct: 32  NPFPETSSTFVLNHLDPSFLLSICGREGNLHLGSSLHASIIKS---FELS---NHYNGVV 85

Query: 146 IYNSLLHMYCKCGQLREAANLFDELPLRDTVSWNSLISGFLKLGE 12
           I NSL+ MY +CG+L +A  +FDE+  RDT+SWN+LI GF++ G+
Sbjct: 86  IMNSLISMYDRCGKLPDAVKVFDEMVTRDTISWNALIGGFVRNGK 130



 Score = 54.7 bits (130), Expect = 8e-06
 Identities = 27/84 (32%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
 Frame = -1

Query: 254 GSQGNIRLGSHLHAYLIKSPPSFDNGAPLSRRN---SQVIYNSLLHMYCKCGQLREAANL 84
           G+  ++RLG  +H++++K             RN   +  + N L++MY KCG L E+  +
Sbjct: 296 GADTSLRLGQQVHSFVVK-------------RNFICNPFVSNGLINMYSKCGALDESMKV 342

Query: 83  FDELPLRDTVSWNSLISGFLKLGE 12
           FD +  R++V+WNS+I+ F + G+
Sbjct: 343 FDRMRERNSVTWNSMIAAFARHGD 366


>ref|XP_004139176.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g05340-like [Cucumis sativus]
          Length = 838

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 43/104 (41%), Positives = 64/104 (61%)
 Frame = -1

Query: 326 SPLPSIYTLSSITDSNLRELINSCGSQGNIRLGSHLHAYLIKSPPSFDNGAPLSRRNSQV 147
           +P P   +   +   +   L++ CG +GN+ LGS LHA +IKS   F+     +  N  V
Sbjct: 32  NPFPETSSTFVLNHLDPSFLLSICGREGNLHLGSSLHASIIKS---FELS---NHYNGVV 85

Query: 146 IYNSLLHMYCKCGQLREAANLFDELPLRDTVSWNSLISGFLKLG 15
           I NSL+ MY +CG+L +A  +FDE+  RDT+SWN+LI GF++ G
Sbjct: 86  IMNSLISMYDRCGKLPDAVKVFDEMITRDTISWNALIGGFVRNG 129


>gb|EEE62323.1| hypothetical protein OsJ_17112 [Oryza sativa Japonica Group]
          Length = 591

 Score = 77.0 bits (188), Expect = 1e-12
 Identities = 39/87 (44%), Positives = 58/87 (66%), Gaps = 1/87 (1%)
 Frame = -1

Query: 269 LINSCGSQGNIRLGSHLHAYLIKSPPSFDNGAPLS-RRNSQVIYNSLLHMYCKCGQLREA 93
           L+ SCG +G++RLG+ LHA ++K+P  F   A     R+  V +NSL+ MY +CG+  +A
Sbjct: 17  LLASCGREGDLRLGAALHAAVVKNPAHFRLCASRPWLRHVLVAWNSLVSMYARCGRREDA 76

Query: 92  ANLFDELPLRDTVSWNSLISGFLKLGE 12
           A +FDE+ +RD VSWNSLI+     G+
Sbjct: 77  ARVFDEMRVRDAVSWNSLIAASRGAGD 103



 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 30/95 (31%), Positives = 54/95 (56%)
 Frame = -1

Query: 299 SSITDSNLRELINSCGSQGNIRLGSHLHAYLIKSPPSFDNGAPLSRRNSQVIYNSLLHMY 120
           + I ++ +  ++ + G+     LG  +HA +IK     +            + N L++MY
Sbjct: 320 NEIDENTVSAVLGAFGASAPFALGKQIHALVIKRCFGVNT----------YVCNGLVNMY 369

Query: 119 CKCGQLREAANLFDELPLRDTVSWNSLISGFLKLG 15
            KCG+LRE+  +FDE+P +++VSWNS+I+ F + G
Sbjct: 370 SKCGELRESVRVFDEMPSKNSVSWNSIIAAFARHG 404


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