BLASTX nr result

ID: Salvia21_contig00039546 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00039546
         (233 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]    71   1e-15
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc...    72   7e-15
gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subc...    71   1e-14
gb|AAB82754.1| retrofit [Oryza longistaminata]                         68   4e-14
ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi...    74   6e-14

>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score = 70.9 bits (172), Expect(2) = 1e-15
 Identities = 30/54 (55%), Positives = 43/54 (79%)
 Frame = -3

Query: 225 ERKQQHVVDMGLTLLSQASLPLTFWWDAFQSATYVINRLPTPSLKNISPFQALY 64
           ERK +H+V+ G+ LL+QASLP  +W +AF+++ Y+INRLPTP LKN SP + L+
Sbjct: 666 ERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVLF 719



 Score = 37.0 bits (84), Expect(2) = 1e-15
 Identities = 12/20 (60%), Positives = 16/20 (80%)
 Frame = -1

Query: 65  IYHQSPNYKWLKVFGCACFP 6
           ++HQ P+Y  LKVFGC C+P
Sbjct: 718 LFHQKPSYSXLKVFGCMCYP 737


>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1478

 Score = 72.0 bits (175), Expect(2) = 7e-15
 Identities = 31/54 (57%), Positives = 45/54 (83%)
 Frame = -3

Query: 225 ERKQQHVVDMGLTLLSQASLPLTFWWDAFQSATYVINRLPTPSLKNISPFQALY 64
           ERK +H+V++GL+LLS AS+PL FW +AFQ+ATY+INR+P+  + NISP + L+
Sbjct: 644 ERKHRHIVEIGLSLLSHASMPLKFWDEAFQAATYLINRVPSRVIHNISPLEKLF 697



 Score = 33.1 bits (74), Expect(2) = 7e-15
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -1

Query: 89  ISHLSKPYIYHQSPNYKWLKVFGCACFP 6
           IS L K  ++ Q P+Y  L++FGCAC+P
Sbjct: 690 ISPLEK--LFKQKPDYSSLRIFGCACWP 715


>gb|ABA98049.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
           Japonica Group]
          Length = 1460

 Score = 70.9 bits (172), Expect(2) = 1e-14
 Identities = 31/54 (57%), Positives = 44/54 (81%)
 Frame = -3

Query: 225 ERKQQHVVDMGLTLLSQASLPLTFWWDAFQSATYVINRLPTPSLKNISPFQALY 64
           ERK +H+V++GL+LLS AS+PL FW +AFQ ATY+INR+P+  + NISP + L+
Sbjct: 611 ERKHRHIVEIGLSLLSHASMPLKFWDEAFQVATYLINRVPSRVIHNISPLEKLF 664



 Score = 33.1 bits (74), Expect(2) = 1e-14
 Identities = 14/28 (50%), Positives = 20/28 (71%)
 Frame = -1

Query: 89  ISHLSKPYIYHQSPNYKWLKVFGCACFP 6
           IS L K  ++ Q P+Y  L++FGCAC+P
Sbjct: 657 ISPLEK--LFKQKPDYSSLRIFGCACWP 682


>gb|AAB82754.1| retrofit [Oryza longistaminata]
          Length = 1445

 Score = 68.2 bits (165), Expect(2) = 4e-14
 Identities = 28/54 (51%), Positives = 45/54 (83%)
 Frame = -3

Query: 225 ERKQQHVVDMGLTLLSQASLPLTFWWDAFQSATYVINRLPTPSLKNISPFQALY 64
           ERK +H+V++GL+LLS AS+PL FW +AF +ATY+INR+P+ +++N +P + L+
Sbjct: 617 ERKHRHIVEVGLSLLSYASMPLKFWDEAFVAATYLINRIPSKTIQNSTPLEKLF 670



 Score = 34.3 bits (77), Expect(2) = 4e-14
 Identities = 11/21 (52%), Positives = 18/21 (85%)
 Frame = -1

Query: 65  IYHQSPNYKWLKVFGCACFPY 3
           +++Q P+Y  L+VFGCAC+P+
Sbjct: 669 LFNQKPDYSSLRVFGCACWPH 689


>ref|XP_003604105.1| Histone deacetylase [Medicago truncatula] gi|355493153|gb|AES74356.1|
            Histone deacetylase [Medicago truncatula]
          Length = 1775

 Score = 73.9 bits (180), Expect(2) = 6e-14
 Identities = 35/56 (62%), Positives = 43/56 (76%)
 Frame = -3

Query: 228  VERKQQHVVDMGLTLLSQASLPLTFWWDAFQSATYVINRLPTPSLKNISPFQALYI 61
            VERK +H+V+ GLTLLS A +PL FW  AF +ATY+INRLPTP L N SPF  L++
Sbjct: 1102 VERKHRHIVETGLTLLSHAQMPLKFWDHAFLTATYLINRLPTPVLANKSPFFLLHL 1157



 Score = 28.1 bits (61), Expect(2) = 6e-14
 Identities = 10/18 (55%), Positives = 14/18 (77%)
 Frame = -1

Query: 65   IYHQSPNYKWLKVFGCAC 12
            ++ Q P+YK+LK FGC C
Sbjct: 1155 LHLQFPDYKFLKSFGCEC 1172


Top