BLASTX nr result

ID: Salvia21_contig00039320 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00039320
         (364 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago t...    81   1e-13
ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat...    80   2e-13
ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|2...    78   8e-13
ref|XP_002533336.1| pentatricopeptide repeat-containing protein,...    73   2e-11
ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat...    72   4e-11

>ref|XP_003628686.1| Pentatricopeptide repeat protein [Medicago truncatula]
           gi|355522708|gb|AET03162.1| Pentatricopeptide repeat
           protein [Medicago truncatula]
          Length = 699

 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 41/78 (52%), Positives = 51/78 (65%)
 Frame = -2

Query: 246 MRALQLLGETAPPTLSSVAAAHCHAIKSSLIADTYISNKLISRYQKCKQSNSSLKVFGEM 67
           M+ L  L  T+  TL  + A HC AIKS  I+D Y SN LI+ Y KC Q   +L++F +M
Sbjct: 1   MQKLHSLIRTSHITLPYLQATHCLAIKSGSISDLYTSNNLITAYSKCAQLPLALQLFDKM 60

Query: 66  PHRDTASWNTVISGYVNS 13
           P RDT SWN VISGYVN+
Sbjct: 61  PQRDTVSWNAVISGYVNT 78


>ref|XP_003551183.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Glycine max]
          Length = 703

 Score = 79.7 bits (195), Expect = 2e-13
 Identities = 36/66 (54%), Positives = 45/66 (68%)
 Frame = -2

Query: 207 TLSSVAAAHCHAIKSSLIADTYISNKLISRYQKCKQSNSSLKVFGEMPHRDTASWNTVIS 28
           TL  + A HC AIK   IAD Y +N LI+ Y KC + NS+ +VF EMPHRDT SWN +IS
Sbjct: 8   TLLGLIATHCRAIKLGSIADPYTANNLITSYAKCTELNSAHQVFDEMPHRDTVSWNAIIS 67

Query: 27  GYVNSG 10
            + +SG
Sbjct: 68  AFASSG 73


>ref|XP_002310370.1| predicted protein [Populus trichocarpa] gi|222853273|gb|EEE90820.1|
           predicted protein [Populus trichocarpa]
          Length = 711

 Score = 77.8 bits (190), Expect = 8e-13
 Identities = 36/82 (43%), Positives = 54/82 (65%), Gaps = 2/82 (2%)
 Frame = -2

Query: 246 MRALQLLGETAPPTLSSVAAAHCHAIKSSLIADTYISNKLISRYQKCKQSNSSL--KVFG 73
           MR L  + E++   L +V   HC A KS +I+  Y++N ++ RY KC   + +L  K+F 
Sbjct: 1   MRPLNSVVESSRHALYNVFLTHCQAFKSGIISHIYVANNILFRYSKCFSGDLNLACKLFD 60

Query: 72  EMPHRDTASWNTVISGYVNSGS 7
           EMPH+DT +WNT+I+GYV SG+
Sbjct: 61  EMPHKDTVTWNTMITGYVESGN 82


>ref|XP_002533336.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223526827|gb|EEF29045.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 708

 Score = 73.2 bits (178), Expect = 2e-11
 Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 2/82 (2%)
 Frame = -2

Query: 246 MRALQLLGETAPPTLSSVAAAHCHAIKSSLIADTYISNKLISRYQKCKQSNSSL--KVFG 73
           MR L  + +++   L ++   HC  IK    AD Y +N ++SRY +C     +    +F 
Sbjct: 1   MRPLNSVIDSSKHALYNIFITHCQTIKLGRSADIYATNNILSRYTRCSSGGLTFACNLFD 60

Query: 72  EMPHRDTASWNTVISGYVNSGS 7
           EM HRDT +WNT+ISGYVNSGS
Sbjct: 61  EMSHRDTVTWNTMISGYVNSGS 82


>ref|XP_002283446.2| PREDICTED: putative pentatricopeptide repeat-containing protein
           At3g25970-like [Vitis vinifera]
          Length = 829

 Score = 72.4 bits (176), Expect = 4e-11
 Identities = 35/81 (43%), Positives = 48/81 (59%)
 Frame = -2

Query: 246 MRALQLLGETAPPTLSSVAAAHCHAIKSSLIADTYISNKLISRYQKCKQSNSSLKVFGEM 67
           MR L  L +++   L   +  HC AIKS   A  Y +N +IS Y KC +   + K+FGE 
Sbjct: 1   MRPLHSLSQSSFTALYRASVNHCLAIKSGTTASIYTANNIISGYAKCGEIRIASKMFGET 60

Query: 66  PHRDTASWNTVISGYVNSGSF 4
             RD  SWNT+I+G+VN G+F
Sbjct: 61  SQRDAVSWNTMIAGFVNLGNF 81


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