BLASTX nr result

ID: Salvia21_contig00039235 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00039235
         (387 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002885364.1| extracellular ligand-gated ion channel [Arab...   156   1e-36
ref|NP_566658.1| uncharacterized protein [Arabidopsis thaliana] ...   155   4e-36
ref|XP_002894263.1| predicted protein [Arabidopsis lyrata subsp....   150   1e-34
gb|AAG51199.1|AC079279_20 unknown protein [Arabidopsis thaliana]      148   5e-34
ref|NP_001031167.1| uncharacterized protein [Arabidopsis thalian...   148   5e-34

>ref|XP_002885364.1| extracellular ligand-gated ion channel [Arabidopsis lyrata subsp.
           lyrata] gi|297331204|gb|EFH61623.1| extracellular
           ligand-gated ion channel [Arabidopsis lyrata subsp.
           lyrata]
          Length = 451

 Score =  156 bits (395), Expect = 1e-36
 Identities = 75/120 (62%), Positives = 90/120 (75%)
 Frame = -3

Query: 361 GDESGRATPLMSPGEKSRALTRMSSDIHDELQAFRRWLKWMCVDQSNAWTACLSWFVFVA 182
           G   GR T       +++  TR  S   DELQ+FR++L+WMCVDQS+ WTA LSW +FV 
Sbjct: 13  GGNDGRGTRERLINRETK-FTRSVSHAQDELQSFRKYLRWMCVDQSSPWTAVLSWSMFVV 71

Query: 181 MTMVVPALSHFVLACTHCDSHHSRPYDAVAQLSLSGVAAISFVCLSTFVSRYGLRRFLFF 2
            T+VVPA SHF+LAC  CDSHHSRPYD+V QLSLS  AA+SF+CLS FVS+YGLRRFLFF
Sbjct: 72  FTLVVPATSHFMLACADCDSHHSRPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFF 131


>ref|NP_566658.1| uncharacterized protein [Arabidopsis thaliana]
           gi|18377809|gb|AAL67091.1| AT3g20300/MQC12_5
           [Arabidopsis thaliana] gi|21537221|gb|AAM61562.1|
           unknown [Arabidopsis thaliana]
           gi|22655008|gb|AAM98095.1| AT3g20300/MQC12_5
           [Arabidopsis thaliana] gi|332642840|gb|AEE76361.1|
           uncharacterized protein [Arabidopsis thaliana]
          Length = 452

 Score =  155 bits (391), Expect = 4e-36
 Identities = 73/120 (60%), Positives = 87/120 (72%)
 Frame = -3

Query: 361 GDESGRATPLMSPGEKSRALTRMSSDIHDELQAFRRWLKWMCVDQSNAWTACLSWFVFVA 182
           G   GR         +    TR  S   DEL +FR++L+WMCVDQS+ WTA LSW +FV 
Sbjct: 13  GGNEGRGGTRERLINRENKFTRSVSHAQDELHSFRKYLRWMCVDQSSPWTAVLSWSMFVV 72

Query: 181 MTMVVPALSHFVLACTHCDSHHSRPYDAVAQLSLSGVAAISFVCLSTFVSRYGLRRFLFF 2
            T+VVPA SHF+LAC+ CDSHHSRPYD+V QLSLS  AA+SF+CLS FVS+YGLRRFLFF
Sbjct: 73  FTLVVPATSHFMLACSDCDSHHSRPYDSVVQLSLSSFAALSFLCLSRFVSKYGLRRFLFF 132


>ref|XP_002894263.1| predicted protein [Arabidopsis lyrata subsp. lyrata]
           gi|297340105|gb|EFH70522.1| predicted protein
           [Arabidopsis lyrata subsp. lyrata]
          Length = 448

 Score =  150 bits (378), Expect = 1e-34
 Identities = 67/105 (63%), Positives = 83/105 (79%)
 Frame = -3

Query: 316 KSRALTRMSSDIHDELQAFRRWLKWMCVDQSNAWTACLSWFVFVAMTMVVPALSHFVLAC 137
           K +   R  S   DEL +FR++L+WMCVD S+ WTA LSW +FV  T+VVPA+SHF+LAC
Sbjct: 21  KKKIFNRCVSHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFVVFTLVVPAISHFLLAC 80

Query: 136 THCDSHHSRPYDAVAQLSLSGVAAISFVCLSTFVSRYGLRRFLFF 2
             CDS+HSRPYD+V QLSLS VA +SF+CL+ FVS+YGLRRFLFF
Sbjct: 81  ADCDSYHSRPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFF 125


>gb|AAG51199.1|AC079279_20 unknown protein [Arabidopsis thaliana]
          Length = 443

 Score =  148 bits (373), Expect = 5e-34
 Identities = 65/104 (62%), Positives = 83/104 (79%)
 Frame = -3

Query: 313 SRALTRMSSDIHDELQAFRRWLKWMCVDQSNAWTACLSWFVFVAMTMVVPALSHFVLACT 134
           ++   R  S   DEL +FR++L+WMCVD S+ WTA LSW +F+  T+VVPA+SHF+LAC 
Sbjct: 23  NKIFNRCVSHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFIVFTLVVPAISHFLLACA 82

Query: 133 HCDSHHSRPYDAVAQLSLSGVAAISFVCLSTFVSRYGLRRFLFF 2
            CDS+HSRPYD+V QLSLS VA +SF+CL+ FVS+YGLRRFLFF
Sbjct: 83  DCDSYHSRPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFF 126


>ref|NP_001031167.1| uncharacterized protein [Arabidopsis thaliana]
           gi|332194452|gb|AEE32573.1| uncharacterized protein
           [Arabidopsis thaliana]
          Length = 428

 Score =  148 bits (373), Expect = 5e-34
 Identities = 65/104 (62%), Positives = 83/104 (79%)
 Frame = -3

Query: 313 SRALTRMSSDIHDELQAFRRWLKWMCVDQSNAWTACLSWFVFVAMTMVVPALSHFVLACT 134
           ++   R  S   DEL +FR++L+WMCVD S+ WTA LSW +F+  T+VVPA+SHF+LAC 
Sbjct: 23  NKIFNRCVSHQQDELHSFRKYLRWMCVDHSSPWTAILSWTMFIVFTLVVPAISHFLLACA 82

Query: 133 HCDSHHSRPYDAVAQLSLSGVAAISFVCLSTFVSRYGLRRFLFF 2
            CDS+HSRPYD+V QLSLS VA +SF+CL+ FVS+YGLRRFLFF
Sbjct: 83  DCDSYHSRPYDSVVQLSLSSVATVSFLCLTRFVSKYGLRRFLFF 126


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