BLASTX nr result

ID: Salvia21_contig00037387 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00037387
         (369 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002521470.1| RNA binding protein, putative [Ricinus commu...   101   5e-20
ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotei...    97   2e-18
emb|CBI34863.3| unnamed protein product [Vitis vinifera]               97   2e-18
emb|CAN65485.1| hypothetical protein VITISV_029475 [Vitis vinifera]    96   3e-18
ref|XP_002894630.1| EMB3012 [Arabidopsis lyrata subsp. lyrata] g...    92   6e-17

>ref|XP_002521470.1| RNA binding protein, putative [Ricinus communis]
           gi|223539369|gb|EEF40960.1| RNA binding protein,
           putative [Ricinus communis]
          Length = 2256

 Score =  101 bits (252), Expect = 5e-20
 Identities = 52/109 (47%), Positives = 66/109 (60%), Gaps = 3/109 (2%)
 Frame = -2

Query: 362 QDEFWNILPFSEGVTAK---SNYRMLDAKSYGLGKLTATLAYHTGHDXXXXXXXXXXXXX 192
           Q + W I   S+ + AK    N R+L A S GLG+L A+L Y TGH              
Sbjct: 400 QSDCWTIFMLSKDIEAKYVWQNSRVLRAASRGLGELKASLTYFTGHQETKEVIEVVQEII 459

Query: 191 VCDQIKFIIEGDSSVSDKILLPWVPGVYQELELRASGGCSMSSSDYKWF 45
           VCDQ+KF ++  SS S  ILLPW P VYQE+EL A+GGC+ +SSDY+WF
Sbjct: 460 VCDQVKFSLDRTSSTSQNILLPWAPVVYQEVELSATGGCAKASSDYRWF 508


>ref|XP_002272790.2| PREDICTED: nuclear pore membrane glycoprotein 210-like [Vitis
           vinifera]
          Length = 2363

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
 Frame = -2

Query: 365 NQDEFWNILPFSEGVTAKS---NYRMLDAKSYGLGKLTATLAYHTGHDXXXXXXXXXXXX 195
           NQ  +W     S+ +  K    N R+L   S GLG LTA+L+Y +G              
Sbjct: 478 NQSIYWKAFLVSDRIAVKHDWWNSRILKMTSEGLGNLTASLSYFSGQPGRKEVLKVVQEV 537

Query: 194 XVCDQIKFIIEGDSSVSDKILLPWVPGVYQELELRASGGCSMSSSDYKWF 45
            VC+++KF  +  S+VS++ILLPW P VYQE++L+A+GGC+ SSSDYKWF
Sbjct: 538 MVCEKVKFSFDKRSAVSERILLPWAPAVYQEVDLKATGGCAKSSSDYKWF 587


>emb|CBI34863.3| unnamed protein product [Vitis vinifera]
          Length = 1961

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
 Frame = -2

Query: 365 NQDEFWNILPFSEGVTAKS---NYRMLDAKSYGLGKLTATLAYHTGHDXXXXXXXXXXXX 195
           NQ  +W     S+ +  K    N R+L   S GLG LTA+L+Y +G              
Sbjct: 403 NQSIYWKAFLVSDRIAVKHDWWNSRILKMTSEGLGNLTASLSYFSGQPGRKEVLKVVQEV 462

Query: 194 XVCDQIKFIIEGDSSVSDKILLPWVPGVYQELELRASGGCSMSSSDYKWF 45
            VC+++KF  +  S+VS++ILLPW P VYQE++L+A+GGC+ SSSDYKWF
Sbjct: 463 MVCEKVKFSFDKRSAVSERILLPWAPAVYQEVDLKATGGCAKSSSDYKWF 512


>emb|CAN65485.1| hypothetical protein VITISV_029475 [Vitis vinifera]
          Length = 875

 Score = 95.9 bits (237), Expect = 3e-18
 Identities = 48/110 (43%), Positives = 67/110 (60%), Gaps = 3/110 (2%)
 Frame = -2

Query: 365 NQDEFWNILPFSEGVTAKS---NYRMLDAKSYGLGKLTATLAYHTGHDXXXXXXXXXXXX 195
           NQ  +W     S+ +  K    N R+L   S GLG LTA+L+Y +G              
Sbjct: 285 NQSIYWKAFLVSDRIAVKHDWWNSRILKMTSEGLGXLTASLSYFSGXPGRKEVLKVVQEV 344

Query: 194 XVCDQIKFIIEGDSSVSDKILLPWVPGVYQELELRASGGCSMSSSDYKWF 45
            VC+++KF  +  S+VS++ILLPW P VYQE++L+A+GGC+ SSSDYKWF
Sbjct: 345 MVCEKVKFSFDKRSAVSERILLPWAPAVYQEVDLKATGGCAKSSSDYKWF 394


>ref|XP_002894630.1| EMB3012 [Arabidopsis lyrata subsp. lyrata]
           gi|297340472|gb|EFH70889.1| EMB3012 [Arabidopsis lyrata
           subsp. lyrata]
          Length = 1722

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 45/111 (40%), Positives = 66/111 (59%), Gaps = 3/111 (2%)
 Frame = -2

Query: 368 GNQDEFWNILPFSEGVTAK---SNYRMLDAKSYGLGKLTATLAYHTGHDXXXXXXXXXXX 198
           G +  +W I    + ++++    N R+L+A S GLG+LTATL Y +GH            
Sbjct: 398 GKESHYWKIFSLPDELSSEYGQQNSRILNAMSPGLGELTATLTYFSGHQESKEVLKIVQE 457

Query: 197 XXVCDQIKFIIEGDSSVSDKILLPWVPGVYQELELRASGGCSMSSSDYKWF 45
             VC++++F +      + KILLPW P VYQE+EL  +GGC+ +SSDYKWF
Sbjct: 458 IMVCEKVQFTLNSKDD-TPKILLPWTPAVYQEMELIVTGGCAKASSDYKWF 507


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