BLASTX nr result

ID: Salvia21_contig00037100 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00037100
         (331 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_004148057.1| PREDICTED: pentatricopeptide repeat-containi...    89   5e-16
ref|XP_002877745.1| pentatricopeptide repeat-containing protein ...    88   8e-16
ref|XP_004161735.1| PREDICTED: pentatricopeptide repeat-containi...    87   1e-15
ref|XP_003611834.1| Pentatricopeptide repeat-containing protein ...    82   5e-14

>ref|XP_003538826.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Glycine max]
          Length = 715

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 50/106 (47%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
 Frame = -3

Query: 317 LLRKCAAATSXXXXXXXXXXXXXXXXXXXXXXLFLHNNILSMYARCGSFADSHLLFDKMP 138
           LL+KC+  TS                       F++NNILSMYARCGS  DSHL+FDKMP
Sbjct: 16  LLQKCSTVTSLREARQLHALILTTTTAFTSQSPFVYNNILSMYARCGSLTDSHLVFDKMP 75

Query: 137 RRNVVSYNTLIAAYSR-RPHHAHLAFQLLDQLAHESHVPNGSTITS 3
           RR +VSYN L+AAYSR  P+HA  A +L  Q+      P+ +T TS
Sbjct: 76  RRTIVSYNALLAAYSRASPNHAISALELYTQMVTNGLRPSSTTFTS 121


>ref|XP_004148057.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Cucumis sativus]
          Length = 696

 Score = 88.6 bits (218), Expect = 5e-16
 Identities = 50/109 (45%), Positives = 63/109 (57%)
 Frame = -3

Query: 329 SSSHLLRKCAAATSXXXXXXXXXXXXXXXXXXXXXXLFLHNNILSMYARCGSFADSHLLF 150
           S S L++KC + TS                       ++ NNILSMYARCG+  +S  +F
Sbjct: 6   SLSALVQKCISVTSLKAARQLHALILTSIATASSLSPYVCNNILSMYARCGAIWESQKVF 65

Query: 149 DKMPRRNVVSYNTLIAAYSRRPHHAHLAFQLLDQLAHESHVPNGSTITS 3
           +KMP+RN+VS+N LIAAYSR   HA LAF LL Q+  E   PN  TITS
Sbjct: 66  EKMPQRNLVSFNALIAAYSRSHGHAPLAFNLLSQMELEFLKPNSFTITS 114


>ref|XP_002877745.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297323583|gb|EFH54004.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 764

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 46/105 (43%), Positives = 58/105 (55%)
 Frame = -3

Query: 317 LLRKCAAATSXXXXXXXXXXXXXXXXXXXXXXLFLHNNILSMYARCGSFADSHLLFDKMP 138
           L RKC + T+                       + +NN++SMY RCGS   +  LFDKMP
Sbjct: 13  LTRKCVSITALKRACQLHAIILTAGAGSASESPYKNNNLISMYVRCGSLEQARKLFDKMP 72

Query: 137 RRNVVSYNTLIAAYSRRPHHAHLAFQLLDQLAHESHVPNGSTITS 3
            RNVVSYN L +AYSR   +A  AF L++Q+A ES  PN ST TS
Sbjct: 73  ERNVVSYNALYSAYSRNLDYASYAFSLINQMASESLKPNSSTFTS 117


>ref|XP_004161735.1| PREDICTED: pentatricopeptide repeat-containing protein
           At3g50420-like [Cucumis sativus]
          Length = 690

 Score = 87.4 bits (215), Expect = 1e-15
 Identities = 48/108 (44%), Positives = 63/108 (58%)
 Frame = -3

Query: 326 SSHLLRKCAAATSXXXXXXXXXXXXXXXXXXXXXXLFLHNNILSMYARCGSFADSHLLFD 147
           ++ L++KC + TS                       ++ NNILSMYARCG+  +S  +F+
Sbjct: 37  ANSLVQKCISVTSLKAARQLHALILTSIATASSLSPYVCNNILSMYARCGAIWESQKVFE 96

Query: 146 KMPRRNVVSYNTLIAAYSRRPHHAHLAFQLLDQLAHESHVPNGSTITS 3
           KMP+RN+VS+N LIAAYSR   HA LAF LL Q+  E   PN  TITS
Sbjct: 97  KMPQRNLVSFNALIAAYSRSHGHAPLAFNLLSQMELEFLKPNSFTITS 144


>ref|XP_003611834.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355513169|gb|AES94792.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 985

 Score = 82.0 bits (201), Expect = 5e-14
 Identities = 46/106 (43%), Positives = 57/106 (53%), Gaps = 1/106 (0%)
 Frame = -3

Query: 317 LLRKCAAATSXXXXXXXXXXXXXXXXXXXXXXLFLHNNILSMYARCGSFADSHLLFDKMP 138
           LL+KC   TS                       FL+NNI+SMY+RCGS  D+H +FDKMP
Sbjct: 285 LLKKCRITTSLQEARQLHALLLTTTNASGSKSAFLYNNIISMYSRCGSLEDAHQVFDKMP 344

Query: 137 RRNVVSYNTLIAAYSR-RPHHAHLAFQLLDQLAHESHVPNGSTITS 3
           +R  VSYN L+AAYSR    H   AF L  Q+ +    P+  TITS
Sbjct: 345 QRTHVSYNALLAAYSRVSEQHCVYAFNLYTQMENMGLRPSNMTITS 390


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