BLASTX nr result

ID: Salvia21_contig00036311 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00036311
         (282 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|2...    78   6e-13
ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containi...    74   9e-12
ref|XP_002512657.1| pentatricopeptide repeat-containing protein,...    74   2e-11
ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containi...    72   6e-11
gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygr...    70   2e-10

>ref|XP_002299342.1| predicted protein [Populus trichocarpa] gi|222846600|gb|EEE84147.1|
           predicted protein [Populus trichocarpa]
          Length = 684

 Score = 78.2 bits (191), Expect = 6e-13
 Identities = 44/94 (46%), Positives = 55/94 (58%)
 Frame = -1

Query: 282 LKSFSESSYLEIGKQMHCRVIKAGFTXXXXXXXXXXXMYVKCGHLDCAERFFSLMQEKNV 103
           L+S    S LEIGKQ+H   I++G             MYVKCG L+ AE  F  M EKN 
Sbjct: 118 LRSLLNPSGLEIGKQIHSHAIRSGLGSNASVNTAISNMYVKCGWLEGAELVFEKMSEKNA 177

Query: 102 VSYTTMMVGCAQAKRHDDALRYFKRMVEEDVDLD 1
           V++T +MVG  QA+R  DAL  F +MV E V+LD
Sbjct: 178 VAWTGIMVGYTQAERQMDALALFAKMVNEGVELD 211


>ref|XP_003516750.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 765

 Score = 74.3 bits (181), Expect = 9e-12
 Identities = 40/94 (42%), Positives = 57/94 (60%)
 Frame = -1

Query: 282 LKSFSESSYLEIGKQMHCRVIKAGFTXXXXXXXXXXXMYVKCGHLDCAERFFSLMQEKNV 103
           + SF++ S L++GKQ+H ++I+ GF            MYVKCG LD AE   + M  KN 
Sbjct: 199 IMSFTDPSMLDLGKQIHSQLIRIGFAANISIETLISNMYVKCGWLDGAEVATNKMTRKNA 258

Query: 102 VSYTTMMVGCAQAKRHDDALRYFKRMVEEDVDLD 1
           V+ T +MVG  +A R+ DAL  F +M+ E V+LD
Sbjct: 259 VACTGLMVGYTKAARNRDALLLFGKMISEGVELD 292


>ref|XP_002512657.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223548618|gb|EEF50109.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 837

 Score = 73.6 bits (179), Expect = 2e-11
 Identities = 42/94 (44%), Positives = 55/94 (58%)
 Frame = -1

Query: 282 LKSFSESSYLEIGKQMHCRVIKAGFTXXXXXXXXXXXMYVKCGHLDCAERFFSLMQEKNV 103
           L+S    S L IGKQ+H   I++G             MYV+CG LD AE F + M EKN 
Sbjct: 198 LRSLLNPSLLGIGKQIHSHSIRSGLGAGVSINTAISNMYVRCGWLDGAELFINNMAEKNA 257

Query: 102 VSYTTMMVGCAQAKRHDDALRYFKRMVEEDVDLD 1
           V++T +MVG  QA +  +AL  F +MV EDV+LD
Sbjct: 258 VAWTGLMVGYTQAGKQKNALDLFAKMVCEDVELD 291


>ref|XP_003538651.1| PREDICTED: pentatricopeptide repeat-containing protein At5g13270,
           chloroplastic-like [Glycine max]
          Length = 753

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 39/94 (41%), Positives = 56/94 (59%)
 Frame = -1

Query: 282 LKSFSESSYLEIGKQMHCRVIKAGFTXXXXXXXXXXXMYVKCGHLDCAERFFSLMQEKNV 103
           + SF++ S L++GKQ+H ++I+  F            MYVKCG LD AE   + M  K+ 
Sbjct: 187 IMSFADPSMLDLGKQIHSQLIRIEFAADISIETLISNMYVKCGWLDGAEVATNKMTRKSA 246

Query: 102 VSYTTMMVGCAQAKRHDDALRYFKRMVEEDVDLD 1
           V+ T +MVG  QA R+ DAL  F +M+ E V+LD
Sbjct: 247 VACTGLMVGYTQAARNRDALLLFSKMISEGVELD 280


>gb|AEB39774.1| pentatricopeptide repeat protein 65 [Funaria hygrometrica]
          Length = 771

 Score = 70.1 bits (170), Expect = 2e-10
 Identities = 35/94 (37%), Positives = 56/94 (59%)
 Frame = -1

Query: 282 LKSFSESSYLEIGKQMHCRVIKAGFTXXXXXXXXXXXMYVKCGHLDCAERFFSLMQEKNV 103
           L S S  ++L+ GK +H +++ AG++           MY KCG +D A   F+ M E+NV
Sbjct: 406 LTSCSSPAFLQEGKSIHQQLVHAGYSLDVYLQSALVSMYAKCGSMDDARLVFNQMSERNV 465

Query: 102 VSYTTMMVGCAQAKRHDDALRYFKRMVEEDVDLD 1
           V++T M+ GCAQ  R  +AL YF++M ++ +  D
Sbjct: 466 VAWTAMITGCAQHGRCREALEYFEQMKKQGIKPD 499



 Score = 57.4 bits (137), Expect = 1e-06
 Identities = 29/91 (31%), Positives = 49/91 (53%)
 Frame = -1

Query: 282 LKSFSESSYLEIGKQMHCRVIKAGFTXXXXXXXXXXXMYVKCGHLDCAERFFSLMQEKNV 103
           L +F+    L++G+++H  + KAG             MY KCG +  A+  F  + EKNV
Sbjct: 204 LNAFTNPELLQVGQKVHMEIAKAGLELEPRVGTSLVGMYAKCGDISKAQVIFDKLPEKNV 263

Query: 102 VSYTTMMVGCAQAKRHDDALRYFKRMVEEDV 10
           V++T ++ G AQ  + D AL   ++M + +V
Sbjct: 264 VTWTLLIAGYAQQGQVDVALELLEKMQQAEV 294



 Score = 55.8 bits (133), Expect = 3e-06
 Identities = 29/85 (34%), Positives = 48/85 (56%)
 Frame = -1

Query: 255 LEIGKQMHCRVIKAGFTXXXXXXXXXXXMYVKCGHLDCAERFFSLMQEKNVVSYTTMMVG 76
           LE GK++H  +I++G+            MY KCG L  A + F  +  ++VV++T M+ G
Sbjct: 314 LEHGKKVHRYIIQSGYGREIWVVNALITMYCKCGGLKEARKLFGDLPHRDVVTWTAMVTG 373

Query: 75  CAQAKRHDDALRYFKRMVEEDVDLD 1
            AQ   HD+A+  F+RM ++ +  D
Sbjct: 374 YAQLGFHDEAIDLFRRMQQQGIKPD 398


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