BLASTX nr result

ID: Salvia21_contig00035908 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00035908
         (244 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum l...   103   2e-20
ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|2...   103   2e-20
ref|XP_004166155.1| PREDICTED: DNA polymerase alpha catalytic su...   102   2e-20
ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic su...   102   2e-20
ref|XP_003611717.1| DNA polymerase alpha catalytic subunit [Medi...    99   3e-19

>gb|AFD98849.1| DNA polymerase alpha catalytic subunit [Solanum lycopersicum]
          Length = 1561

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/87 (62%), Positives = 63/87 (72%), Gaps = 6/87 (6%)
 Frame = -1

Query: 244  GARAQRVEYLLLHAFHAKKFIVPDKFSPQSRDTRTVKRKSSAG-----ADENDLDDTNFD 80
            GARAQRVEYLLLHAFHAKKFIVPDKFS  +R+ +  KRK + G      +  D DD N +
Sbjct: 857  GARAQRVEYLLLHAFHAKKFIVPDKFSSHAREAKITKRKLNQGDEGKETEPIDADDPNIE 916

Query: 79   EAPED-SHGKTKKGPSYAGGLVLEPKK 2
                D +HGK KKGPSY+GGLVLEPK+
Sbjct: 917  GGILDINHGKAKKGPSYSGGLVLEPKR 943


>ref|XP_002310719.1| predicted protein [Populus trichocarpa] gi|222853622|gb|EEE91169.1|
           predicted protein [Populus trichocarpa]
          Length = 1312

 Score =  103 bits (256), Expect = 2e-20
 Identities = 54/87 (62%), Positives = 64/87 (73%), Gaps = 6/87 (6%)
 Frame = -1

Query: 244 GARAQRVEYLLLHAFHAKKFIVPDKFSPQSRDTRTVKRKSSAG-----ADENDLDDTNFD 80
           GARAQRVEYLLLHAFHAKK+IVPDK S + ++ +  KR+ + G     ADE D D  NF+
Sbjct: 606 GARAQRVEYLLLHAFHAKKYIVPDKMSSRVKEAKITKRRINNGIEDRNADELDTDAANFE 665

Query: 79  EAPEDS-HGKTKKGPSYAGGLVLEPKK 2
              + S HGK KKGP+YAGGLVLEPKK
Sbjct: 666 NDNQQSDHGKRKKGPAYAGGLVLEPKK 692


>ref|XP_004166155.1| PREDICTED: DNA polymerase alpha catalytic subunit-like, partial
           [Cucumis sativus]
          Length = 1027

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
 Frame = -1

Query: 244 GARAQRVEYLLLHAFHAKKFIVPDKFSPQSRDTRTVKRKSSAGADENDLDDTNFD----E 77
           GARAQRVEYLLLHAFHAKK+IVPDK S   +D + VK++++ G++E ++D  + D    E
Sbjct: 325 GARAQRVEYLLLHAFHAKKYIVPDKNSSYVKDKKIVKKRTNHGSEEKNVDQFDLDDGNVE 384

Query: 76  APEDSHGKTKKGPSYAGGLVLEPKK 2
           AP    GK KKGPSY GGLVLEPK+
Sbjct: 385 APNTDSGKGKKGPSYLGGLVLEPKR 409


>ref|XP_004149697.1| PREDICTED: DNA polymerase alpha catalytic subunit-like [Cucumis
            sativus]
          Length = 1547

 Score =  102 bits (255), Expect = 2e-20
 Identities = 51/85 (60%), Positives = 64/85 (75%), Gaps = 4/85 (4%)
 Frame = -1

Query: 244  GARAQRVEYLLLHAFHAKKFIVPDKFSPQSRDTRTVKRKSSAGADENDLDDTNFD----E 77
            GARAQRVEYLLLHAFHAKK+IVPDK S   +D + VK++++ G++E ++D  + D    E
Sbjct: 845  GARAQRVEYLLLHAFHAKKYIVPDKNSSYVKDKKIVKKRTNHGSEEKNVDQFDLDDGNVE 904

Query: 76   APEDSHGKTKKGPSYAGGLVLEPKK 2
            AP    GK KKGPSY GGLVLEPK+
Sbjct: 905  APNTDSGKGKKGPSYLGGLVLEPKR 929


>ref|XP_003611717.1| DNA polymerase alpha catalytic subunit [Medicago truncatula]
            gi|355513052|gb|AES94675.1| DNA polymerase alpha
            catalytic subunit [Medicago truncatula]
          Length = 987

 Score = 99.4 bits (246), Expect = 3e-19
 Identities = 49/87 (56%), Positives = 61/87 (70%), Gaps = 6/87 (6%)
 Frame = -1

Query: 244  GARAQRVEYLLLHAFHAKKFIVPDKFSPQSRDTRTVKRKSSAGADENDLDDTNF------ 83
            GARAQRVEYLLLH FH KK+IVPDKFS  +++T+  KR+ + G D+ + DD +       
Sbjct: 825  GARAQRVEYLLLHEFHKKKYIVPDKFSNYAKETKLTKRRVTHGVDDGNFDDADINDANYH 884

Query: 82   DEAPEDSHGKTKKGPSYAGGLVLEPKK 2
            ++A E  H K KK  SYAGGLVLEPKK
Sbjct: 885  NDASESDHKKNKKAASYAGGLVLEPKK 911


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