BLASTX nr result

ID: Salvia21_contig00035878 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00035878
         (395 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAJ00278.1| hypothetical protein [Lotus japonicus]                110   1e-22
emb|CAJ00277.1| hypothetical protein [Lotus japonicus]                110   1e-22
emb|CAJ00274.1| hypothetical protein [Lotus japonicus]                110   1e-22
gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris ...   107   1e-21
gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]      106   2e-21

>emb|CAJ00278.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/80 (65%), Positives = 61/80 (76%)
 Frame = +3

Query: 108  RMKVAADKRRQHREFQVLDWVYLKLKPYKQRSLRAHKDWKLSPRYAGPFQIIRRVGKVAY 287
            RMK+ ADK R  REF V DWV LKL+PY+Q S +     KLSPR+ GP+Q++ RVGKVAY
Sbjct: 1344 RMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRASEKLSPRFFGPYQVLHRVGKVAY 1403

Query: 288  ELALPPTSKLHPVFHVSLLK 347
             LALPP SK+HP FHVSLLK
Sbjct: 1404 TLALPPESKIHPTFHVSLLK 1423


>emb|CAJ00277.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/80 (65%), Positives = 61/80 (76%)
 Frame = +3

Query: 108  RMKVAADKRRQHREFQVLDWVYLKLKPYKQRSLRAHKDWKLSPRYAGPFQIIRRVGKVAY 287
            RMK+ ADK R  REF V DWV LKL+PY+Q S +     KLSPR+ GP+Q++ RVGKVAY
Sbjct: 1344 RMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRASEKLSPRFFGPYQVLHRVGKVAY 1403

Query: 288  ELALPPTSKLHPVFHVSLLK 347
             LALPP SK+HP FHVSLLK
Sbjct: 1404 TLALPPESKIHPTFHVSLLK 1423


>emb|CAJ00274.1| hypothetical protein [Lotus japonicus]
          Length = 1508

 Score =  110 bits (275), Expect = 1e-22
 Identities = 52/80 (65%), Positives = 61/80 (76%)
 Frame = +3

Query: 108  RMKVAADKRRQHREFQVLDWVYLKLKPYKQRSLRAHKDWKLSPRYAGPFQIIRRVGKVAY 287
            RMK+ ADK R  REF V DWV LKL+PY+Q S +     KLSPR+ GP+Q++ RVGKVAY
Sbjct: 1344 RMKIQADKHRTDREFSVGDWVLLKLQPYRQSSTQHRASEKLSPRFFGPYQVLHRVGKVAY 1403

Query: 288  ELALPPTSKLHPVFHVSLLK 347
             LALPP SK+HP FHVSLLK
Sbjct: 1404 TLALPPESKIHPTFHVSLLK 1423


>gb|AFK13856.1| Ty3/gypsy retrotransposon protein [Beta vulgaris subsp. vulgaris]
          Length = 1631

 Score =  107 bits (266), Expect = 1e-21
 Identities = 58/121 (47%), Positives = 78/121 (64%)
 Frame = +3

Query: 27   VVGVEATIQEKMDIXXXXXXXXXXXXDRMKVAADKRRQHREFQVLDWVYLKLKPYKQRSL 206
            V  +EA +Q++  I             RMK  AD  R   EFQV D V+L+L+PY+QRSL
Sbjct: 1410 VESLEAMLQDRDAIIDDLQVNLVRAQQRMKHYADGSRTEVEFQVGDAVFLRLQPYRQRSL 1469

Query: 207  RAHKDWKLSPRYAGPFQIIRRVGKVAYELALPPTSKLHPVFHVSLLKRSVHGDTSVSSTL 386
                  KL+PR+ GPF +++R+G  AY+L LPP+SK+HPVFHVSLLK+ V G+T V  T+
Sbjct: 1470 AKRPFEKLAPRFYGPFTVLQRIGATAYKLQLPPSSKIHPVFHVSLLKKVV-GNTPVLPTI 1528

Query: 387  P 389
            P
Sbjct: 1529 P 1529


>gb|AAL76001.1|AF466646_9 putative gag-pol polyprotein [Zea mays]
          Length = 2396

 Score =  106 bits (264), Expect = 2e-21
 Identities = 53/96 (55%), Positives = 65/96 (67%)
 Frame = +3

Query: 105  DRMKVAADKRRQHREFQVLDWVYLKLKPYKQRSLRAHKDWKLSPRYAGPFQIIRRVGKVA 284
            DRMK  ADK+R  R F V DWVYLKL+PY Q S+    + KLS ++ GPFQI  R+G VA
Sbjct: 1388 DRMKRQADKQRSERVFSVGDWVYLKLQPYIQSSVATRSNHKLSFKFFGPFQITDRLGSVA 1447

Query: 285  YELALPPTSKLHPVFHVSLLKRSVHGDTSVSSTLPE 392
            Y LALP +S +HP+FHVS LKR +  D   S  LP+
Sbjct: 1448 YRLALPASSSIHPIFHVSQLKRVIGRDQRASPQLPQ 1483


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