BLASTX nr result

ID: Salvia21_contig00035543 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Salvia21_contig00035543
         (398 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago t...    70   2e-10
gb|AFK43552.1| unknown [Medicago truncatula]                           69   3e-10
ref|XP_002309693.1| predicted protein [Populus trichocarpa] gi|2...    69   5e-10
ref|XP_002878803.1| hypothetical protein ARALYDRAFT_901077 [Arab...    68   7e-10
ref|NP_180055.1| translocon at the inner envelope membrane of ch...    68   7e-10

>ref|XP_003603276.1| Rieske iron-sulfur protein Tic55 [Medicago truncatula]
           gi|355492324|gb|AES73527.1| Rieske iron-sulfur protein
           Tic55 [Medicago truncatula]
          Length = 552

 Score = 69.7 bits (169), Expect = 2e-10
 Identities = 33/60 (55%), Positives = 39/60 (65%), Gaps = 6/60 (10%)
 Frame = +2

Query: 236 AGEISAAEGDQSVI------EDSLRQNEVVRYDWSEEWYPLYLTNNVPDDAPLGLTVFDK 397
           A  +   E DQ V+      ++   + E+  YDW EEWYPLYLT NVPDDAPLGLTVFDK
Sbjct: 65  ASTLLDVEEDQKVLVGPSSEQERRGERELAAYDWKEEWYPLYLTKNVPDDAPLGLTVFDK 124


>gb|AFK43552.1| unknown [Medicago truncatula]
          Length = 197

 Score = 69.3 bits (168), Expect = 3e-10
 Identities = 32/53 (60%), Positives = 37/53 (69%), Gaps = 6/53 (11%)
 Frame = +2

Query: 257 EGDQSVI------EDSLRQNEVVRYDWSEEWYPLYLTNNVPDDAPLGLTVFDK 397
           E DQ V+      ++   + E+  YDW EEWYPLYLT NVPDDAPLGLTVFDK
Sbjct: 72  EEDQKVLVGPSSEQERRGERELAAYDWKEEWYPLYLTKNVPDDAPLGLTVFDK 124


>ref|XP_002309693.1| predicted protein [Populus trichocarpa] gi|222855669|gb|EEE93216.1|
           predicted protein [Populus trichocarpa]
          Length = 556

 Score = 68.6 bits (166), Expect = 5e-10
 Identities = 29/40 (72%), Positives = 33/40 (82%)
 Frame = +2

Query: 278 EDSLRQNEVVRYDWSEEWYPLYLTNNVPDDAPLGLTVFDK 397
           E+   + EV  YDW+EEWYPLYLT +VPDDAPLGLTVFDK
Sbjct: 89  EERRGEREVADYDWTEEWYPLYLTKDVPDDAPLGLTVFDK 128


>ref|XP_002878803.1| hypothetical protein ARALYDRAFT_901077 [Arabidopsis lyrata subsp.
           lyrata] gi|297324642|gb|EFH55062.1| hypothetical protein
           ARALYDRAFT_901077 [Arabidopsis lyrata subsp. lyrata]
          Length = 539

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
 Frame = +2

Query: 227 SAVAGEISAAE----GDQSVIEDSLRQNEVVRYDWSEEWYPLYLTNNVPDDAPLGLTVFD 394
           SAVAG   A +    G+  +  +  ++ EV  YDW+EEWYPLYLT N+PDDAPLGLTV+D
Sbjct: 50  SAVAGTAVADQIEGGGEVLLNLEEEKRVEVADYDWTEEWYPLYLTKNIPDDAPLGLTVYD 109

Query: 395 K 397
           +
Sbjct: 110 R 110


>ref|NP_180055.1| translocon at the inner envelope membrane of chloroplasts 55-II
           [Arabidopsis thaliana]
           gi|75265982|sp|Q9SK50.1|TIC55_ARATH RecName:
           Full=Protein TIC 55, chloroplastic; AltName:
           Full=Translocon at the inner envelope membrane of
           chloroplasts 55; Short=AtTIC55; AltName: Full=Translocon
           at the inner envelope membrane of chloroplasts 55-II;
           Flags: Precursor gi|4559369|gb|AAD23030.1| putative
           Rieske iron-sulfur protein [Arabidopsis thaliana]
           gi|330252538|gb|AEC07632.1| translocon at the inner
           envelope membrane of chloroplasts 55-II [Arabidopsis
           thaliana]
          Length = 539

 Score = 68.2 bits (165), Expect = 7e-10
 Identities = 33/61 (54%), Positives = 43/61 (70%), Gaps = 4/61 (6%)
 Frame = +2

Query: 227 SAVAGEISAAE----GDQSVIEDSLRQNEVVRYDWSEEWYPLYLTNNVPDDAPLGLTVFD 394
           SAVAG   + +    GD  +  +  ++ EV  YDW+EEWYPLYLT NVP+DAPLGLTV+D
Sbjct: 50  SAVAGTAVSDQTEGGGDVLLNPEEEKRVEVADYDWTEEWYPLYLTKNVPEDAPLGLTVYD 109

Query: 395 K 397
           +
Sbjct: 110 R 110


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